RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 BCAMP50895 628 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 FOXO4P98177 505 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 CYP26C1Q6V0L0 522 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 VPS36Q86VN1 386 aa13.62□□□□□ -0.23
CPNE6-202ENST00000460657 FOXP1Q9H334 677 aaPredicted RBP13.62□□□□□ -0.23
CPNE6-202ENST00000460657 VIRMAQ69YN4 1812 aaKnown RBP13.61□□□□□ -0.23
CPNE6-202ENST00000460657 CHMP4BP1P59074 171 aa13.61□□□□□ -0.23
CPNE6-202ENST00000460657 ZNF827Q17R98 1081 aa13.61□□□□□ -0.23
CPNE6-202ENST00000460657 ZNF804AQ7Z570 1209 aa13.61□□□□□ -0.23
CPNE6-202ENST00000460657 RRP36Q96EU6 259 aaKnown RBP13.61□□□□□ -0.23
CPNE6-202ENST00000460657 CCDC42Q96M95 316 aa13.61□□□□□ -0.23
CPNE6-202ENST00000460657 CENPHQ9H3R5 247 aa13.61□□□□□ -0.23
CPNE6-202ENST00000460657 PPP2R2CQ9Y2T4 447 aa13.61□□□□□ -0.23
CPNE6-202ENST00000460657 ZNF609O15014 1411 aa13.61□□□□□ -0.23
CPNE6-202ENST00000460657 ENOX2Q16206 610 aaKnown RBP13.61□□□□□ -0.23
CPNE6-202ENST00000460657 FCHSD1Q86WN1 690 aa13.61□□□□□ -0.23
CPNE6-202ENST00000460657 FMR1NBQ8N0W7 255 aaPredicted RBP13.61□□□□□ -0.23
CPNE6-202ENST00000460657 NAPGQ99747 312 aaPredicted RBP13.61□□□□□ -0.23
CPNE6-202ENST00000460657 TACC1O75410 805 aa13.61□□□□□ -0.23
CPNE6-202ENST00000460657 RHOXF2BP0C7M4 288 aa13.61□□□□□ -0.23
CPNE6-202ENST00000460657 NGLY1Q96IV0 654 aa13.61□□□□□ -0.23
CPNE6-202ENST00000460657 ZSCAN10Q96SZ4 725 aaPredicted RBP13.61□□□□□ -0.23
CPNE6-202ENST00000460657 RHOXF2Q9BQY4 288 aa13.61□□□□□ -0.23
CPNE6-202ENST00000460657 IFNAR1P17181 557 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 DNA2P51530 1060 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 EXOSC10Q01780 885 aaKnown RBP13.6□□□□□ -0.23
CPNE6-202ENST00000460657 PLIN2Q99541 437 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.6□□□□□ -0.23
CPNE6-202ENST00000460657 PPP1R2P41236 205 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 LIFRP42702 1097 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 SDR42E1Q8WUS8 393 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 AIFM3Q96NN9 605 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 ZBTB1Q9Y2K1 713 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 SIGLEC1Q9BZZ2 1709 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 IL6STP40189 918 aaPredicted RBP13.6□□□□□ -0.23
CPNE6-202ENST00000460657 PDIA6Q15084 440 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 ATG9AQ7Z3C6 839 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 TTLL11Q8NHH1 800 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 TRERF1Q96PN7 1200 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 AATFQ9NY61 560 aaKnown RBP eCLIP13.6□□□□□ -0.23
CPNE6-202ENST00000460657 MAPK8IP1Q9UQF2 711 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 JAG2Q9Y219 1238 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 WDR19Q8NEZ3 1342 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 SHTN1A0MZ66 631 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 KRT9P35527 623 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 ARID5BQ14865 1188 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 CCDC122Q5T0U0 273 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 HDXQ7Z353 690 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 MB21D2Q8IYB1 491 aaPredicted RBP13.6□□□□□ -0.23
CPNE6-202ENST00000460657 STAMQ92783 540 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 CCDC51Q96ER9 411 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 MMRN2Q9H8L6 949 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 TAF6LQ9Y6J9 622 aa13.6□□□□□ -0.23
CPNE6-202ENST00000460657 STX10O60499 249 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 PLCG2P16885 1265 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 MCAMP43121 646 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 PIH1D3Q9NQM4 214 aaKnown RBP13.59□□□□□ -0.23
CPNE6-202ENST00000460657 RICTORQ6R327 1708 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 NBPF26B4DH59 902 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 MATR3P43243 847 aaKnown RBP eCLIP13.59□□□□□ -0.23
CPNE6-202ENST00000460657 NBPF14Q5TI25 921 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 NBPF10Q6P3W6 841 aaKnown RBP13.59□□□□□ -0.23
CPNE6-202ENST00000460657 NBPF15Q8N660 670 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 UBA5Q9GZZ9 404 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 TAB2Q9NYJ8 693 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 USP17L12C9JPN9 530 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 USP17L21D6R901 530 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 CCDC144BQ3MJ40 725 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 KRT79Q5XKE5 535 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 RNF26Q9BY78 433 aaPredicted RBP13.59□□□□□ -0.23
CPNE6-202ENST00000460657 GJB4Q9NTQ9 266 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 SEPT11Q9NVA2 429 aaKnown RBP13.59□□□□□ -0.23
CPNE6-202ENST00000460657 ZSWIM5Q9P217 1185 aa13.59□□□□□ -0.23
CPNE6-202ENST00000460657 MMP1P03956 469 aa13.58□□□□□ -0.23
CPNE6-202ENST00000460657 SPATA1Q5VX52 437 aa13.58□□□□□ -0.23
CPNE6-202ENST00000460657 KAZALD1Q96I82 304 aa13.58□□□□□ -0.23
CPNE6-202ENST00000460657 KCNF1Q9H3M0 494 aa13.58□□□□□ -0.23
CPNE6-202ENST00000460657 EFCAB8A8MWE9 144 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 WDHD1O75717 1129 aaPredicted RBP13.58□□□□□ -0.24
CPNE6-202ENST00000460657 ERCC5P28715 1186 aaPredicted RBP13.58□□□□□ -0.24
CPNE6-202ENST00000460657 RFX5P48382 616 aaPredicted RBP13.58□□□□□ -0.24
CPNE6-202ENST00000460657 TBC1D8BQ0IIM8 1120 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 LETM2Q2VYF4 491 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 GPR161Q8N6U8 529 aaKnown RBP13.58□□□□□ -0.24
CPNE6-202ENST00000460657 AK9Q5TCS8 1911 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 MYO5BQ9ULV0 1848 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 HLA-DOAP06340 250 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 ODF2Q5BJF6 829 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 NELFBQ8WX92 580 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 ISCA1Q9BUE6 129 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 CHRNDQ07001 517 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 DRC1Q96MC2 740 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 BPIFA3Q9BQP9 254 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 DESI2Q9BSY9 194 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 BLZF1Q9H2G9 400 aa13.58□□□□□ -0.24
CPNE6-202ENST00000460657 PARP1P09874 1014 aaKnown RBP13.57□□□□□ -0.24
CPNE6-202ENST00000460657 GYG1P46976 350 aa13.57□□□□□ -0.24
CPNE6-202ENST00000460657 STRBPQ96SI9 672 aaKnown RBP13.57□□□□□ -0.24
CPNE6-202ENST00000460657 CHGBP05060 677 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms