RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 ELF1P32519 619 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 GUCY1B3Q02153 619 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ERFEQ4G0M1 354 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 DNAAF4Q8WXU2 420 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 KIF1BPQ96EK5 621 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 PPP1R9BQ96SB3 815 aa7.04□□□□□ -1.28
HLA-DQA1-205ENST00000460633 BIN1O00499 593 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 NBPF10Q6P3W6 841 aaKnown RBP7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ERO1AQ96HE7 468 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 PIK3C2AO00443 1686 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 DNM1Q05193 864 aaKnown RBP7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 FKBP15Q5T1M5 1219 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 KSR2Q6VAB6 950 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 MICAL1Q8TDZ2 1067 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TEKT1Q969V4 418 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 RRP36Q96EU6 259 aaKnown RBP7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 FTOQ9C0B1 505 aaKnown RBP eCLIP7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 RSPH14Q9UHP6 348 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ATF5Q9Y2D1 282 aaPredicted RBP7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 LRP6O75581 1613 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 M0R2C6 588 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZNF500O60304 480 aaPredicted RBP7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 NPR1P16066 1061 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 C10orf67Q8IYJ2 551 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 FSIP1Q8NA03 581 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 NKX2-3Q8TAU0 364 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ESR2Q92731 530 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZBTB9Q96C00 473 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 DNAJC25Q9H1X3 360 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 DNAI1Q9UI46 699 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 LMO7Q8WWI1 1683 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 TRIM37O94972 964 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZSCAN20P17040 1043 aaPredicted RBP7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 BPIFB4P59827 614 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 CCDC26Q8TAB7 109 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 FAM114A2Q9NRY5 505 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 LMBRD1Q9NUN5 540 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 ZNF215Q9UL58 517 aaPredicted RBP7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 IQSEC3Q9UPP2 1182 aaPredicted RBP7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SLC12A7Q9Y666 1083 aa7.03□□□□□ -1.28
HLA-DQA1-205ENST00000460633 MYOM1P52179 1685 aa7.02□□□□□ -1.28
HLA-DQA1-205ENST00000460633 SMTNP53814 917 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 GNG11P61952 73 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 NOX5Q96PH1 765 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 BCL2L12Q9HB09 334 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 AAASQ9NRG9 546 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 SH3TC1Q8TE82 1336 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 F13A1P00488 732 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PICALMQ13492 652 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 KIAA1841Q6NSI8 718 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ANKRD13DQ6ZTN6 518 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 NECAB1Q8N987 351 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 TAF4BQ92750 862 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 USP26Q9BXU7 913 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ZBTB3Q9H5J0 574 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CHL1O00533 1208 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 RPLP2P05387 115 aaKnown RBP7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 CTNNA2P26232 953 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MNAT1P51948 309 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 YARSP54577 528 aaKnown RBP7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 TYRO3Q06418 890 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 DMTNQ08495 405 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ISM2Q6H9L7 571 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 METTL23Q86XA0 190 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 DACT1Q9NYF0 836 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MAP3K20Q9NYL2 800 aaKnown RBP7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 F8W031 263 aaPredicted RBP7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PFDN6O15212 129 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 POLR2BP30876 1174 aaKnown RBP7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 RNF187Q5TA31 235 aaPredicted RBP7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 LMCD1Q9NZU5 365 aa7.02□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ZNF213O14771 459 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 LIG1P18858 919 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 IL15P40933 162 aaPredicted RBP7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 SSRP1Q08945 709 aaKnown RBP7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 STRN3Q13033 797 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MAP9Q49MG5 647 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MFSD6Q6ZSS7 791 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 KIAA1328Q86T90 577 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 LUZP1Q86V48 1076 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 DDX42Q86XP3 938 aaKnown RBP eCLIP7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 DPF3Q92784 378 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ADPGKQ9BRR6 497 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 FAM107BQ9H098 131 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ARFGAP3Q9NP61 516 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 RABGAP1Q9Y3P9 1069 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PTPDC1A2A3K4 754 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ZBBXA8MT70 800 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 BBOX1O75936 387 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 GABPB1Q06547 395 aaPredicted RBP7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 PDE4DQ08499 809 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 GOLGA8FQ08AF8 430 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 GOLGA8DPQ0D2H9 430 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 TFDP1Q14186 410 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 KRBA2Q6ZNG9 492 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 ESYT1Q9BSJ8 1104 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 MAGEB6P1A0A0J9YX57 407 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 POTEB2H3BUK9 544 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 IVLP07476 585 aa7.01□□□□□ -1.29
HLA-DQA1-205ENST00000460633 HIBADHP31937 336 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms