RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 ALPK3Q96L96 1907 aa13.41□□□□□ -0.26
VAMP7-203ENST00000460621 PAWRQ96IZ0 340 aaKnown RBP13.41□□□□□ -0.26
VAMP7-203ENST00000460621 EMILIN3Q9NT22 766 aa13.41□□□□□ -0.26
VAMP7-203ENST00000460621 RBPJLQ9UBG7 517 aa13.41□□□□□ -0.26
VAMP7-203ENST00000460621 MORF4L1Q9UBU8 362 aa13.41□□□□□ -0.26
VAMP7-203ENST00000460621 TFRCP02786 760 aaKnown RBP13.4□□□□□ -0.26
VAMP7-203ENST00000460621 CYP7A1P22680 504 aa13.4□□□□□ -0.26
VAMP7-203ENST00000460621 HOXA7P31268 230 aaPredicted RBP13.4□□□□□ -0.26
VAMP7-203ENST00000460621 GCLCP48506 637 aaPredicted RBP13.4□□□□□ -0.26
VAMP7-203ENST00000460621 CCDC158Q5M9N0 1113 aa13.4□□□□□ -0.26
VAMP7-203ENST00000460621 FOXP4Q8IVH2 680 aaPredicted RBP13.4□□□□□ -0.26
VAMP7-203ENST00000460621 MIER1Q8N108 512 aa13.4□□□□□ -0.26
VAMP7-203ENST00000460621 TRIB2Q92519 343 aa13.4□□□□□ -0.26
VAMP7-203ENST00000460621 COA7Q96BR5 231 aa13.4□□□□□ -0.26
VAMP7-203ENST00000460621 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.4□□□□□ -0.26
VAMP7-203ENST00000460621 DHX36Q9H2U1 1008 aaKnown RBP13.4□□□□□ -0.26
VAMP7-203ENST00000460621 PNMA3Q9UL41 463 aa13.4□□□□□ -0.26
VAMP7-203ENST00000460621 FOCADQ5VW36 1801 aa13.39□□□□□ -0.27
VAMP7-203ENST00000460621 SOX1O00570 391 aaPredicted RBP13.39□□□□□ -0.27
VAMP7-203ENST00000460621 BAG3O95817 575 aa13.39□□□□□ -0.27
VAMP7-203ENST00000460621 OS9Q13438 667 aaPredicted RBP13.39□□□□□ -0.27
VAMP7-203ENST00000460621 CEP85Q6P2H3 762 aa13.39□□□□□ -0.27
VAMP7-203ENST00000460621 MIGA1Q8NAN2 632 aa13.39□□□□□ -0.27
VAMP7-203ENST00000460621 USP6NLQ92738 828 aa13.39□□□□□ -0.27
VAMP7-203ENST00000460621 HTATIP2Q9BUP3 242 aa13.39□□□□□ -0.27
VAMP7-203ENST00000460621 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
VAMP7-203ENST00000460621 PORCNQ9H237 461 aa13.39□□□□□ -0.27
VAMP7-203ENST00000460621 ZBTB21Q9ULJ3 1066 aa13.39□□□□□ -0.27
VAMP7-203ENST00000460621 MAST2Q6P0Q8 1798 aa13.39□□□□□ -0.27
VAMP7-203ENST00000460621 LAMA3Q16787 3333 aa13.39□□□□□ -0.27
VAMP7-203ENST00000460621 CNMDO75829 334 aa13.38□□□□□ -0.27
VAMP7-203ENST00000460621 ASNSP08243 561 aa13.38□□□□□ -0.27
VAMP7-203ENST00000460621 CYP2B6P20813 491 aa13.38□□□□□ -0.27
VAMP7-203ENST00000460621 HERVK_113P62684 666 aa13.38□□□□□ -0.27
VAMP7-203ENST00000460621 TATDN1Q6P1N9 297 aa13.38□□□□□ -0.27
VAMP7-203ENST00000460621 ITPRIPQ8IWB1 547 aa13.38□□□□□ -0.27
VAMP7-203ENST00000460621 PANK1Q8TE04 598 aa13.38□□□□□ -0.27
VAMP7-203ENST00000460621 AS3MTQ9HBK9 375 aa13.38□□□□□ -0.27
VAMP7-203ENST00000460621 EXOC6BQ9Y2D4 811 aa13.38□□□□□ -0.27
VAMP7-203ENST00000460621 USP17L10C9JJH3 530 aa13.37□□□□□ -0.27
VAMP7-203ENST00000460621 IDH1O75874 414 aaKnown RBP13.37□□□□□ -0.27
VAMP7-203ENST00000460621 GH2P01242 217 aa13.37□□□□□ -0.27
VAMP7-203ENST00000460621 HMGCRP04035 888 aa13.37□□□□□ -0.27
VAMP7-203ENST00000460621 PLCG2P16885 1265 aa13.37□□□□□ -0.27
VAMP7-203ENST00000460621 GUCY1A2P33402 732 aa13.37□□□□□ -0.27
VAMP7-203ENST00000460621 MAP3K21Q5TCX8 1036 aa13.37□□□□□ -0.27
VAMP7-203ENST00000460621 MAGEB6Q8N7X4 407 aa13.37□□□□□ -0.27
VAMP7-203ENST00000460621 ACER1Q8TDN7 264 aa13.37□□□□□ -0.27
VAMP7-203ENST00000460621 RIOK1Q9BRS2 568 aaKnown RBP13.37□□□□□ -0.27
VAMP7-203ENST00000460621 STAP2Q9UGK3 403 aa13.37□□□□□ -0.27
VAMP7-203ENST00000460621 C19orf81C9J6K1 198 aa13.36□□□□□ -0.27
VAMP7-203ENST00000460621 PLCD1P51178 756 aa13.36□□□□□ -0.27
VAMP7-203ENST00000460621 IRX3P78415 501 aaPredicted RBP13.36□□□□□ -0.27
VAMP7-203ENST00000460621 HNRNPUQ00839 825 aaKnown RBP eCLIP13.36□□□□□ -0.27
VAMP7-203ENST00000460621 PABPC4Q13310 644 aaKnown RBP eCLIP13.36□□□□□ -0.27
VAMP7-203ENST00000460621 CCL14Q16627 93 aa13.36□□□□□ -0.27
VAMP7-203ENST00000460621 CRACR2BQ8N4Y2 399 aaPredicted RBP13.36□□□□□ -0.27
VAMP7-203ENST00000460621 NOL10Q9BSC4 688 aaKnown RBP13.36□□□□□ -0.27
VAMP7-203ENST00000460621 TMOD4Q9NZQ9 345 aa13.36□□□□□ -0.27
VAMP7-203ENST00000460621 RPTORQ8N122 1335 aa13.36□□□□□ -0.27
VAMP7-203ENST00000460621 SMIM22K7EJ46 135 aa13.35□□□□□ -0.27
VAMP7-203ENST00000460621 EVI5O60447 810 aa13.35□□□□□ -0.27
VAMP7-203ENST00000460621 SHMT1P34896 483 aa13.35□□□□□ -0.27
VAMP7-203ENST00000460621 ERVK-9P63128 1117 aa13.35□□□□□ -0.27
VAMP7-203ENST00000460621 ERVK-24P63145 666 aa13.35□□□□□ -0.27
VAMP7-203ENST00000460621 ZYXQ15942 572 aaKnown RBP13.35□□□□□ -0.27
VAMP7-203ENST00000460621 SLFNL1Q499Z3 407 aa13.35□□□□□ -0.27
VAMP7-203ENST00000460621 MORN1Q5T089 497 aa13.35□□□□□ -0.27
VAMP7-203ENST00000460621 SIRT2Q8IXJ6 389 aa13.35□□□□□ -0.27
VAMP7-203ENST00000460621 GPRC5AQ8NFJ5 357 aa13.35□□□□□ -0.27
VAMP7-203ENST00000460621 LRCH3Q96II8 777 aa13.35□□□□□ -0.27
VAMP7-203ENST00000460621 IL1RAPL2Q9NP60 686 aa13.35□□□□□ -0.27
VAMP7-203ENST00000460621 OGDHLQ9ULD0 1010 aa13.35□□□□□ -0.27
VAMP7-203ENST00000460621 NR2E3Q9Y5X4 410 aa13.35□□□□□ -0.27
VAMP7-203ENST00000460621 PRKAR2AP13861 404 aaKnown RBP13.34□□□□□ -0.27
VAMP7-203ENST00000460621 CCND3P30281 292 aaPredicted RBP13.34□□□□□ -0.27
VAMP7-203ENST00000460621 CACNB2Q08289 660 aaPredicted RBP13.34□□□□□ -0.27
VAMP7-203ENST00000460621 LHX8Q68G74 356 aa13.34□□□□□ -0.27
VAMP7-203ENST00000460621 NECAB2Q7Z6G3 386 aa13.34□□□□□ -0.27
VAMP7-203ENST00000460621 AACSQ86V21 672 aa13.34□□□□□ -0.27
VAMP7-203ENST00000460621 FTSJ3Q8IY81 847 aaKnown RBP13.34□□□□□ -0.27
VAMP7-203ENST00000460621 EDC3Q96F86 508 aaKnown RBP13.34□□□□□ -0.27
VAMP7-203ENST00000460621 PAGR1Q9BTK6 254 aa13.34□□□□□ -0.27
VAMP7-203ENST00000460621 HMX1Q9NP08 348 aaPredicted RBP13.34□□□□□ -0.27
VAMP7-203ENST00000460621 GINM1Q9NU53 330 aa13.34□□□□□ -0.27
VAMP7-203ENST00000460621 FLRT1Q9NZU1 646 aa13.34□□□□□ -0.27
VAMP7-203ENST00000460621 ZMYND8Q9ULU4 1186 aaPredicted RBP13.34□□□□□ -0.27
VAMP7-203ENST00000460621 MYH1P12882 1939 aa13.34□□□□□ -0.27
VAMP7-203ENST00000460621 PFASO15067 1338 aa13.34□□□□□ -0.27
VAMP7-203ENST00000460621 CHGBP05060 677 aa13.33□□□□□ -0.28
VAMP7-203ENST00000460621 XRCC5P13010 732 aaKnown RBP13.33□□□□□ -0.28
VAMP7-203ENST00000460621 GABPAQ06546 454 aa13.33□□□□□ -0.28
VAMP7-203ENST00000460621 KIAA1755Q5JYT7 1200 aa13.33□□□□□ -0.28
VAMP7-203ENST00000460621 USP17L2Q6R6M4 530 aa13.33□□□□□ -0.28
VAMP7-203ENST00000460621 CATSPERGQ6ZRH7 1159 aa13.33□□□□□ -0.28
VAMP7-203ENST00000460621 GPR142Q7Z601 462 aa13.33□□□□□ -0.28
VAMP7-203ENST00000460621 RHPN1Q8TCX5 695 aa13.33□□□□□ -0.28
VAMP7-203ENST00000460621 C12orf42Q96LP6 360 aa13.33□□□□□ -0.28
VAMP7-203ENST00000460621 GDF15Q99988 308 aa13.33□□□□□ -0.28
VAMP7-203ENST00000460621 NUDT12Q9BQG2 462 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms