RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 CHADLQ6NUI6 762 aa18.24■□□□□ 0.51
CMTM3-203ENST00000460097 DZIP1Q86YF9 867 aaKnown RBP18.24■□□□□ 0.51
CMTM3-203ENST00000460097 SMC1BQ8NDV3 1235 aa18.24■□□□□ 0.51
CMTM3-203ENST00000460097 TEKT1Q969V4 418 aa18.24■□□□□ 0.51
CMTM3-203ENST00000460097 PGAP2Q9UHJ9 254 aa18.24■□□□□ 0.51
CMTM3-203ENST00000460097 NRBP1Q9UHY1 535 aa18.24■□□□□ 0.51
CMTM3-203ENST00000460097 NDUFB9Q9Y6M9 179 aa18.24■□□□□ 0.51
CMTM3-203ENST00000460097 AKAP11Q9UKA4 1901 aa18.23■□□□□ 0.51
CMTM3-203ENST00000460097 SLC27A2O14975 620 aa18.23■□□□□ 0.51
CMTM3-203ENST00000460097 CPA1P15085 419 aa18.23■□□□□ 0.51
CMTM3-203ENST00000460097 SLC20A2Q08357 652 aa18.23■□□□□ 0.51
CMTM3-203ENST00000460097 STX1AQ16623 288 aa18.23■□□□□ 0.51
CMTM3-203ENST00000460097 NBPF9Q3BBW0 867 aa18.23■□□□□ 0.51
CMTM3-203ENST00000460097 DNAJC2Q99543 621 aaKnown RBP18.23■□□□□ 0.51
CMTM3-203ENST00000460097 HAUS7Q99871 368 aa18.23■□□□□ 0.51
CMTM3-203ENST00000460097 RAI14Q9P0K7 980 aa18.23■□□□□ 0.51
CMTM3-203ENST00000460097 IMPACTQ9P2X3 320 aa18.23■□□□□ 0.51
CMTM3-203ENST00000460097 GOLGA6L19H0YKK7 550 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 KRT32Q14532 448 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 TTF1Q15361 905 aaPredicted RBP18.22■□□□□ 0.51
CMTM3-203ENST00000460097 CAMK4Q16566 473 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 BLOC1S2Q6QNY1 142 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 HHIPL2Q6UWX4 724 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 SLF2Q8IX21 1173 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 CKAP2LQ8IYA6 745 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 ZBED3Q96IU2 234 aaPredicted RBP18.22■□□□□ 0.51
CMTM3-203ENST00000460097 PRMT6Q96LA8 375 aaPredicted RBP18.22■□□□□ 0.51
CMTM3-203ENST00000460097 PCDHAC2Q9Y5I4 1007 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 SPDYE2BA6NHP3 402 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 IGSF3O75054 1194 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 SPDYE6P0CI01 402 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 MECOMQ03112 1051 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 RESTQ13127 1097 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 CCDC144BQ3MJ40 725 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 MAP1SQ66K74 1059 aaPredicted RBP18.22■□□□□ 0.51
CMTM3-203ENST00000460097 CCDC144CPQ8IYA2 1237 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 ZDHHC15Q96MV8 337 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 L2HGDHQ9H9P8 463 aa18.22■□□□□ 0.51
CMTM3-203ENST00000460097 PIH1D3Q9NQM4 214 aaKnown RBP18.22■□□□□ 0.51
CMTM3-203ENST00000460097 RFX7Q2KHR2 1363 aa18.21■□□□□ 0.51
CMTM3-203ENST00000460097 GOLIM4O00461 696 aa18.21■□□□□ 0.51
CMTM3-203ENST00000460097 MYO1BO43795 1136 aa18.21■□□□□ 0.51
CMTM3-203ENST00000460097 SLU7O95391 586 aaKnown RBP18.21■□□□□ 0.51
CMTM3-203ENST00000460097 FSTL1Q12841 308 aa18.21■□□□□ 0.51
CMTM3-203ENST00000460097 DIXDC1Q155Q3 683 aa18.21■□□□□ 0.51
CMTM3-203ENST00000460097 KMT5BQ4FZB7 885 aa18.21■□□□□ 0.51
CMTM3-203ENST00000460097 NECAB1Q8N987 351 aa18.21■□□□□ 0.51
CMTM3-203ENST00000460097 DCPSQ96C86 337 aaKnown RBP18.21■□□□□ 0.51
CMTM3-203ENST00000460097 NSUN4Q96CB9 384 aaKnown RBP18.21■□□□□ 0.51
CMTM3-203ENST00000460097 PGBD1Q96JS3 809 aa18.21■□□□□ 0.51
CMTM3-203ENST00000460097 LARP6Q9BRS8 491 aaKnown RBP18.21■□□□□ 0.51
CMTM3-203ENST00000460097 OSBPL5Q9H0X9 879 aaPredicted RBP18.21■□□□□ 0.51
CMTM3-203ENST00000460097 ASTN2O75129 1339 aaPredicted RBP18.21■□□□□ 0.51
CMTM3-203ENST00000460097 NR1I2O75469 434 aa18.2■□□□□ 0.5
CMTM3-203ENST00000460097 GSTO1P78417 241 aa18.2■□□□□ 0.5
CMTM3-203ENST00000460097 FGD1P98174 961 aa18.2■□□□□ 0.5
CMTM3-203ENST00000460097 ANGEL2Q5VTE6 544 aaKnown RBP18.2■□□□□ 0.5
CMTM3-203ENST00000460097 LLPHQ9BRT6 129 aaKnown RBP18.2■□□□□ 0.5
CMTM3-203ENST00000460097 DNAJC25Q9H1X3 360 aa18.2■□□□□ 0.5
CMTM3-203ENST00000460097 PAG1Q9NWQ8 432 aa18.2■□□□□ 0.5
CMTM3-203ENST00000460097 GGA3Q9NZ52 723 aa18.2■□□□□ 0.5
CMTM3-203ENST00000460097 IDH1O75874 414 aaKnown RBP18.19■□□□□ 0.5
CMTM3-203ENST00000460097 CCZ1BP86790 482 aa18.19■□□□□ 0.5
CMTM3-203ENST00000460097 CCZ1P86791 482 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-203ENST00000460097 MAP3K12Q12852 859 aa18.19■□□□□ 0.5
CMTM3-203ENST00000460097 CCAR2Q8N163 923 aaKnown RBP18.19■□□□□ 0.5
CMTM3-203ENST00000460097 FAM163AQ96GL9 167 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-203ENST00000460097 CALCOCO1Q9P1Z2 691 aa18.19■□□□□ 0.5
CMTM3-203ENST00000460097 ADAMTSL1Q8N6G6 1762 aa18.19■□□□□ 0.5
CMTM3-203ENST00000460097 LDHCP07864 332 aa18.19■□□□□ 0.5
CMTM3-203ENST00000460097 SKILP12757 684 aa18.19■□□□□ 0.5
CMTM3-203ENST00000460097 TOB2Q14106 344 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-203ENST00000460097 APOBEC3HQ6NTF7 200 aaKnown RBP18.19■□□□□ 0.5
CMTM3-203ENST00000460097 EDC3Q96F86 508 aaKnown RBP18.19■□□□□ 0.5
CMTM3-203ENST00000460097 RCOR1Q9UKL0 485 aa18.19■□□□□ 0.5
CMTM3-203ENST00000460097 ZNF215Q9UL58 517 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-203ENST00000460097 DAGLAQ9Y4D2 1042 aa18.19■□□□□ 0.5
CMTM3-203ENST00000460097 H2AFXP16104 143 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-203ENST00000460097 BMS1Q14692 1282 aaKnown RBP18.18■□□□□ 0.5
CMTM3-203ENST00000460097 NAA16Q6N069 864 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-203ENST00000460097 BICD2Q8TD16 824 aa18.18■□□□□ 0.5
CMTM3-203ENST00000460097 ZNF384Q8TF68 577 aa18.18■□□□□ 0.5
CMTM3-203ENST00000460097 GTF3C6Q969F1 213 aa18.18■□□□□ 0.5
CMTM3-203ENST00000460097 TDRD3Q9H7E2 651 aaKnown RBP18.18■□□□□ 0.5
CMTM3-203ENST00000460097 ANO10Q9NW15 660 aa18.18■□□□□ 0.5
CMTM3-203ENST00000460097 PITPNM2Q9BZ72 1349 aa18.18■□□□□ 0.5
CMTM3-203ENST00000460097 KRT26Q7Z3Y9 468 aa18.17■□□□□ 0.5
CMTM3-203ENST00000460097 SULF1Q8IWU6 871 aa18.17■□□□□ 0.5
CMTM3-203ENST00000460097 TIGD1Q96MW7 591 aa18.17■□□□□ 0.5
CMTM3-203ENST00000460097 BPIFA3Q9BQP9 254 aa18.17■□□□□ 0.5
CMTM3-203ENST00000460097 GAKO14976 1311 aa18.17■□□□□ 0.5
CMTM3-203ENST00000460097 CLRN2A0PK11 232 aa18.17■□□□□ 0.5
CMTM3-203ENST00000460097 ITGBL1O95965 494 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-203ENST00000460097 FERMT3Q86UX7 667 aa18.17■□□□□ 0.5
CMTM3-203ENST00000460097 TICAM2Q86XR7 235 aa18.17■□□□□ 0.5
CMTM3-203ENST00000460097 NAT10Q9H0A0 1025 aaKnown RBP18.17■□□□□ 0.5
CMTM3-203ENST00000460097 ZNF70Q9UC06 446 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-203ENST00000460097 MROH7-TTC4A0A0A0MT08 1334 aa18.16■□□□□ 0.5
CMTM3-203ENST00000460097 CCDC69A6NI79 296 aa18.16■□□□□ 0.5
CMTM3-203ENST00000460097 SPDYE2Q495Y8 402 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms