RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 RAG1P15918 1043 aa17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 HOXA7P31268 230 aaPredicted RBP17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 CYP2C19P33261 490 aa17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 FLIIQ13045 1269 aa17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 AAK1Q2M2I8 961 aa17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 ANO1Q5XXA6 986 aa17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 CCAR1Q8IX12 1150 aaKnown RBP17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 VGLL2Q8N8G2 317 aa17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 WDR66Q8TBY9 1149 aa17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 DDX4Q9NQI0 724 aaKnown RBP17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 REV3LO60673 3130 aa17.04■□□□□ 0.32
PCOLCE-202ENST00000460002 SMIM22K7EJ46 135 aa17.03■□□□□ 0.32
PCOLCE-202ENST00000460002 CYBAP13498 195 aa17.03■□□□□ 0.32
PCOLCE-202ENST00000460002 NDUFB9Q9Y6M9 179 aa17.03■□□□□ 0.32
PCOLCE-202ENST00000460002 IGHA2P01877 340 aa17.02■□□□□ 0.32
PCOLCE-202ENST00000460002 MYCNP04198 464 aaPredicted RBP17.02■□□□□ 0.32
PCOLCE-202ENST00000460002 NHLH1Q02575 133 aa17.02■□□□□ 0.32
PCOLCE-202ENST00000460002 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.32
PCOLCE-202ENST00000460002 RRP1BQ14684 758 aaKnown RBP17.02■□□□□ 0.32
PCOLCE-202ENST00000460002 LRRC24Q50LG9 513 aa17.02■□□□□ 0.32
PCOLCE-202ENST00000460002 MICALL1Q8N3F8 863 aa17.02■□□□□ 0.32
PCOLCE-202ENST00000460002 PAGR1Q9BTK6 254 aa17.02■□□□□ 0.32
PCOLCE-202ENST00000460002 TBC1D2Q9BYX2 928 aa17.02■□□□□ 0.32
PCOLCE-202ENST00000460002 OSBPL5Q9H0X9 879 aaPredicted RBP17.02■□□□□ 0.32
PCOLCE-202ENST00000460002 MYBBP1AQ9BQG0 1328 aaKnown RBP17.01■□□□□ 0.31
PCOLCE-202ENST00000460002 ERC2O15083 957 aa17.01■□□□□ 0.31
PCOLCE-202ENST00000460002 TBC1D12O60347 775 aa17.01■□□□□ 0.31
PCOLCE-202ENST00000460002 PDE8BO95263 885 aa17.01■□□□□ 0.31
PCOLCE-202ENST00000460002 ZEB1P37275 1124 aaPredicted RBP17.01■□□□□ 0.31
PCOLCE-202ENST00000460002 ATP2B2Q01814 1243 aa17.01■□□□□ 0.31
PCOLCE-202ENST00000460002 MTMR2Q13614 643 aa17.01■□□□□ 0.31
PCOLCE-202ENST00000460002 METTL24Q5JXM2 366 aa17.01■□□□□ 0.31
PCOLCE-202ENST00000460002 NPLOC4Q8TAT6 608 aa17.01■□□□□ 0.31
PCOLCE-202ENST00000460002 PLXNA1Q9UIW2 1896 aa17.01■□□□□ 0.31
PCOLCE-202ENST00000460002 USP17L5A8MUK1 530 aa17■□□□□ 0.31
PCOLCE-202ENST00000460002 MYO9BQ13459 2157 aa17■□□□□ 0.31
PCOLCE-202ENST00000460002 PICALMQ13492 652 aa17■□□□□ 0.31
PCOLCE-202ENST00000460002 RASIP1Q5U651 963 aa17■□□□□ 0.31
PCOLCE-202ENST00000460002 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17■□□□□ 0.31
PCOLCE-202ENST00000460002 PI4K2BG5E9Z4 385 aa16.99■□□□□ 0.31
PCOLCE-202ENST00000460002 TLL1O43897 1013 aa16.99■□□□□ 0.31
PCOLCE-202ENST00000460002 LDHBP07195 334 aaKnown RBP16.99■□□□□ 0.31
PCOLCE-202ENST00000460002 HOXC6P09630 235 aa16.99■□□□□ 0.31
PCOLCE-202ENST00000460002 CAP2P40123 477 aa16.99■□□□□ 0.31
PCOLCE-202ENST00000460002 LRRC41Q15345 812 aa16.99■□□□□ 0.31
PCOLCE-202ENST00000460002 BEND3Q5T5X7 828 aa16.99■□□□□ 0.31
PCOLCE-202ENST00000460002 C16orf59Q7L2K0 433 aa16.99■□□□□ 0.31
PCOLCE-202ENST00000460002 CWC22Q9HCG8 908 aaKnown RBP16.99■□□□□ 0.31
PCOLCE-202ENST00000460002 CHD7Q9P2D1 2997 aa16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 KIF16BQ96L93 1317 aa16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 SLC15A5A6NIM6 579 aa16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 GRM8O00222 908 aa16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 PQBP1O60828 265 aaKnown RBP16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 FGFR2P21802 821 aa16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 PTPREP23469 700 aa16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 BACE1P56817 501 aa16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 CALD1Q05682 793 aaKnown RBP16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 SKIV2LQ15477 1246 aaKnown RBP16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 TMEM240Q5SV17 173 aa16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 NKX2-4Q9H2Z4 354 aa16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 TMEM39AQ9NV64 488 aa16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 TMOD4Q9NZQ9 345 aa16.98■□□□□ 0.31
PCOLCE-202ENST00000460002 GAKO14976 1311 aa16.97■□□□□ 0.31
PCOLCE-202ENST00000460002 PRR33A8MZF0 331 aa16.97■□□□□ 0.31
PCOLCE-202ENST00000460002 F6X3S4 739 aa16.97■□□□□ 0.31
PCOLCE-202ENST00000460002 CNMDO75829 334 aa16.97■□□□□ 0.31
PCOLCE-202ENST00000460002 KAZALD1Q96I82 304 aa16.97■□□□□ 0.31
PCOLCE-202ENST00000460002 WDR18Q9BV38 432 aa16.97■□□□□ 0.31
PCOLCE-202ENST00000460002 AS3MTQ9HBK9 375 aa16.97■□□□□ 0.31
PCOLCE-202ENST00000460002 CD320Q9NPF0 282 aa16.97■□□□□ 0.31
PCOLCE-202ENST00000460002 SEPT4O43236 478 aa16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 GLRX3O76003 335 aaKnown RBP16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 IFIT1P09914 478 aaKnown RBP16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 FAAP100Q0VG06 881 aa16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 GRB14Q14449 540 aa16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 RAB30Q15771 203 aa16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 WDR78Q5VTH9 848 aa16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 SLC44A5Q8NCS7 719 aa16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 HERVK_113Q902F9 699 aa16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 TSR2Q969E8 191 aaKnown RBP16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 MSRAQ9UJ68 235 aa16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 ADAMTS8Q9UP79 889 aa16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 PHF24Q9UPV7 400 aa16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 YBX2Q9Y2T7 364 aaKnown RBP16.96■□□□□ 0.31
PCOLCE-202ENST00000460002 LRRC37A2A6NM11 1700 aa16.96■□□□□ 0.3
PCOLCE-202ENST00000460002 TWISTNBQ3B726 338 aaPredicted RBP16.95■□□□□ 0.3
PCOLCE-202ENST00000460002 FAM47AQ5JRC9 791 aa16.95■□□□□ 0.3
PCOLCE-202ENST00000460002 GTF3C2Q8WUA4 911 aaPredicted RBP16.95■□□□□ 0.3
PCOLCE-202ENST00000460002 SUCLG2Q96I99 432 aa16.95■□□□□ 0.3
PCOLCE-202ENST00000460002 FBXL18Q96ME1 805 aa16.95■□□□□ 0.3
PCOLCE-202ENST00000460002 SLC28A3Q9HAS3 691 aa16.95■□□□□ 0.3
PCOLCE-202ENST00000460002 ATAD5Q96QE3 1844 aa16.94■□□□□ 0.3
PCOLCE-202ENST00000460002 PUM3Q15397 648 aaKnown RBP16.94■□□□□ 0.3
PCOLCE-202ENST00000460002 TIMP1P01033 207 aa16.93■□□□□ 0.3
PCOLCE-202ENST00000460002 JAG1P78504 1218 aa16.93■□□□□ 0.3
PCOLCE-202ENST00000460002 RABGAP1Q9Y3P9 1069 aa16.93■□□□□ 0.3
PCOLCE-202ENST00000460002 SALL1Q9NSC2 1324 aa16.93■□□□□ 0.3
PCOLCE-202ENST00000460002 C19orf81C9J6K1 198 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms