RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 CPSF6Q16630 551 aaKnown RBP eCLIP6.26□□□□□ -1.41
SSX2IP-204ENST00000459708 FBXL19Q6PCT2 694 aa6.26□□□□□ -1.41
SSX2IP-204ENST00000459708 CDC37L1Q7L3B6 337 aa6.26□□□□□ -1.41
SSX2IP-204ENST00000459708 FBXL18Q96ME1 805 aa6.26□□□□□ -1.41
SSX2IP-204ENST00000459708 KCNQ5Q9NR82 932 aa6.26□□□□□ -1.41
SSX2IP-204ENST00000459708 CORINQ9Y5Q5 1042 aa6.26□□□□□ -1.41
SSX2IP-204ENST00000459708 U3KQE9 123 aa6.26□□□□□ -1.41
SSX2IP-204ENST00000459708 TLR3O15455 904 aaKnown RBP6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 PRNPP04156 253 aa6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 EIF4A3P38919 411 aaKnown RBP6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 CRKP46108 304 aa6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 ZNF394Q53GI3 561 aa6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 OGFOD3Q6PK18 319 aa6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 FAM196AQ6ZSG2 479 aa6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 FAM181AQ8N9Y4 354 aa6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 KCT2Q8NC54 265 aa6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 ZNF507Q8TCN5 953 aa6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 DPH2Q9BQC3 489 aaPredicted RBP6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 LRRC4CQ9HCJ2 640 aa6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 METTL5Q9NRN9 209 aaKnown RBP6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 POLR3KQ9Y2Y1 108 aaPredicted RBP6.25□□□□□ -1.41
SSX2IP-204ENST00000459708 SCAMP3O14828 347 aaKnown RBP6.24□□□□□ -1.41
SSX2IP-204ENST00000459708 GRIN3BO60391 1043 aa6.24□□□□□ -1.41
SSX2IP-204ENST00000459708 PGRP06401 933 aa6.24□□□□□ -1.41
SSX2IP-204ENST00000459708 ITGB5P18084 799 aa6.24□□□□□ -1.41
SSX2IP-204ENST00000459708 CYP27A1Q02318 531 aa6.24□□□□□ -1.41
SSX2IP-204ENST00000459708 PRAMEF13Q5VWM6 474 aa6.24□□□□□ -1.41
SSX2IP-204ENST00000459708 DUSP27Q5VZP5 1158 aa6.24□□□□□ -1.41
SSX2IP-204ENST00000459708 REC114Q7Z4M0 266 aa6.24□□□□□ -1.41
SSX2IP-204ENST00000459708 USP48Q86UV5 1035 aa6.24□□□□□ -1.41
SSX2IP-204ENST00000459708 PRDM10Q9NQV6 1147 aa6.24□□□□□ -1.41
SSX2IP-204ENST00000459708 TJP2Q9UDY2 1190 aa6.24□□□□□ -1.41
SSX2IP-204ENST00000459708 SUPT16HQ9Y5B9 1047 aaKnown RBP6.24□□□□□ -1.41
SSX2IP-204ENST00000459708 TACC3Q9Y6A5 838 aa6.24□□□□□ -1.41
SSX2IP-204ENST00000459708 CYP26A1O43174 497 aa6.23□□□□□ -1.41
SSX2IP-204ENST00000459708 GREM1O60565 184 aa6.23□□□□□ -1.41
SSX2IP-204ENST00000459708 LRIG2O94898 1065 aa6.23□□□□□ -1.41
SSX2IP-204ENST00000459708 CAP2P40123 477 aa6.23□□□□□ -1.41
SSX2IP-204ENST00000459708 MPP2Q14168 576 aa6.23□□□□□ -1.41
SSX2IP-204ENST00000459708 METTL16Q86W50 562 aaKnown RBP6.23□□□□□ -1.41
SSX2IP-204ENST00000459708 HID1Q8IV36 788 aa6.23□□□□□ -1.41
SSX2IP-204ENST00000459708 ZNF296Q8WUU4 475 aaPredicted RBP6.23□□□□□ -1.41
SSX2IP-204ENST00000459708 ACSF2Q96CM8 615 aaPredicted RBP6.23□□□□□ -1.41
SSX2IP-204ENST00000459708 LRRC3Q9BY71 257 aa6.23□□□□□ -1.41
SSX2IP-204ENST00000459708 FOXQ1Q9C009 403 aa6.23□□□□□ -1.41
SSX2IP-204ENST00000459708 UBP1Q9NZI7 540 aa6.23□□□□□ -1.41
SSX2IP-204ENST00000459708 RBAK-RBAKDNI3L0D1 243 aa6.22□□□□□ -1.41
SSX2IP-204ENST00000459708 SLITRK5O94991 958 aa6.22□□□□□ -1.41
SSX2IP-204ENST00000459708 JUNBP17275 347 aaPredicted RBP6.22□□□□□ -1.41
SSX2IP-204ENST00000459708 HDLBPQ00341 1268 aaKnown RBP6.22□□□□□ -1.41
SSX2IP-204ENST00000459708 PDE4BQ07343 736 aa6.22□□□□□ -1.41
SSX2IP-204ENST00000459708 CYP27C1Q4G0S4 372 aa6.22□□□□□ -1.41
SSX2IP-204ENST00000459708 KIAA0825Q8IV33 1275 aa6.22□□□□□ -1.41
SSX2IP-204ENST00000459708 MRPL41Q8IXM3 137 aaKnown RBP6.22□□□□□ -1.41
SSX2IP-204ENST00000459708 FLCNQ8NFG4 579 aa6.22□□□□□ -1.41
SSX2IP-204ENST00000459708 XAGE3Q8WTP9 111 aa6.22□□□□□ -1.41
SSX2IP-204ENST00000459708 RNF34Q969K3 372 aa6.22□□□□□ -1.41
SSX2IP-204ENST00000459708 TMEM87BQ96K49 555 aa6.22□□□□□ -1.41
SSX2IP-204ENST00000459708 MIPEPQ99797 713 aa6.22□□□□□ -1.41
SSX2IP-204ENST00000459708 HTR3BO95264 441 aa6.21□□□□□ -1.42
SSX2IP-204ENST00000459708 EOMESO95936 686 aa6.21□□□□□ -1.42
SSX2IP-204ENST00000459708 CST3P01034 146 aaPredicted RBP6.21□□□□□ -1.42
SSX2IP-204ENST00000459708 PLCG1P19174 1290 aa6.21□□□□□ -1.42
SSX2IP-204ENST00000459708 LCE4AQ5TA78 99 aa6.21□□□□□ -1.42
SSX2IP-204ENST00000459708 C9orf131Q5VYM1 1079 aa6.21□□□□□ -1.42
SSX2IP-204ENST00000459708 DIEXFQ68CQ4 756 aaKnown RBP6.21□□□□□ -1.42
SSX2IP-204ENST00000459708 SPON2Q9BUD6 331 aa6.21□□□□□ -1.42
SSX2IP-204ENST00000459708 BSDC1Q9NW68 430 aaPredicted RBP6.21□□□□□ -1.42
SSX2IP-204ENST00000459708 REV1Q9UBZ9 1251 aa6.21□□□□□ -1.42
SSX2IP-204ENST00000459708 ZC3H7BQ9UGR2 993 aaKnown RBP6.21□□□□□ -1.42
SSX2IP-204ENST00000459708 ADAM30Q9UKF2 790 aa6.21□□□□□ -1.42
SSX2IP-204ENST00000459708 DNAJA2O60884 412 aa6.2□□□□□ -1.42
SSX2IP-204ENST00000459708 RACK1P63244 317 aaKnown RBP6.2□□□□□ -1.42
SSX2IP-204ENST00000459708 APOBRQ0VD83 1088 aa6.2□□□□□ -1.42
SSX2IP-204ENST00000459708 CWF19L2Q2TBE0 894 aaKnown RBP6.2□□□□□ -1.42
SSX2IP-204ENST00000459708 SEZ6Q53EL9 994 aa6.2□□□□□ -1.42
SSX2IP-204ENST00000459708 FAM214BQ7L5A3 538 aa6.2□□□□□ -1.42
SSX2IP-204ENST00000459708 PLD6Q8N2A8 252 aaKnown RBP6.2□□□□□ -1.42
SSX2IP-204ENST00000459708 HEXIM2Q96MH2 286 aaKnown RBP6.2□□□□□ -1.42
SSX2IP-204ENST00000459708 KRTAP4-2Q9BYR5 136 aa6.2□□□□□ -1.42
SSX2IP-204ENST00000459708 BRMS1Q9HCU9 246 aa6.2□□□□□ -1.42
SSX2IP-204ENST00000459708 KLHL3Q9UH77 587 aa6.2□□□□□ -1.42
SSX2IP-204ENST00000459708 DDX41Q9UJV9 622 aaKnown RBP6.2□□□□□ -1.42
SSX2IP-204ENST00000459708 PRR36Q9H6K5 1346 aa6.2□□□□□ -1.42
SSX2IP-204ENST00000459708 ITIH2P19823 946 aa6.19□□□□□ -1.42
SSX2IP-204ENST00000459708 RBM25P49756 843 aaKnown RBP6.19□□□□□ -1.42
SSX2IP-204ENST00000459708 TMEM201Q5SNT2 666 aa6.19□□□□□ -1.42
SSX2IP-204ENST00000459708 LETMD1Q6P1Q0 360 aa6.19□□□□□ -1.42
SSX2IP-204ENST00000459708 NT5DC4Q86YG4 428 aa6.19□□□□□ -1.42
SSX2IP-204ENST00000459708 MCATQ8IVS2 390 aaKnown RBP6.19□□□□□ -1.42
SSX2IP-204ENST00000459708 AGBL5Q8NDL9 886 aa6.19□□□□□ -1.42
SSX2IP-204ENST00000459708 EAF1Q96JC9 268 aaPredicted RBP6.19□□□□□ -1.42
SSX2IP-204ENST00000459708 PAK6Q9NQU5 681 aaPredicted RBP6.19□□□□□ -1.42
SSX2IP-204ENST00000459708 CNTNAP4Q9C0A0 1308 aa6.19□□□□□ -1.42
SSX2IP-204ENST00000459708 UPK3BL1B0FP48 263 aa6.18□□□□□ -1.42
SSX2IP-204ENST00000459708 UPK3BL2E5RIL1 263 aa6.18□□□□□ -1.42
SSX2IP-204ENST00000459708 PAPLNO95428 1278 aa6.18□□□□□ -1.42
SSX2IP-204ENST00000459708 CEACAM5P06731 702 aa6.18□□□□□ -1.42
SSX2IP-204ENST00000459708 OXCT1P55809 520 aa6.18□□□□□ -1.42
SSX2IP-204ENST00000459708 ZNF648Q5T619 568 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms