RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 PCP11498 1178 aaKnown RBP10.55□□□□□ -0.72
VPS50-207ENST00000458530 PDIA4P13667 645 aaKnown RBP10.55□□□□□ -0.72
VPS50-207ENST00000458530 MCM5P33992 734 aa10.55□□□□□ -0.72
VPS50-207ENST00000458530 NUCB2P80303 420 aa10.55□□□□□ -0.72
VPS50-207ENST00000458530 CUL4AQ13619 759 aa10.55□□□□□ -0.72
VPS50-207ENST00000458530 MFSD14BQ5SR56 506 aa10.55□□□□□ -0.72
VPS50-207ENST00000458530 PODNQ7Z5L7 613 aa10.55□□□□□ -0.72
VPS50-207ENST00000458530 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
VPS50-207ENST00000458530 IFNL3Q8IZI9 196 aa10.55□□□□□ -0.72
VPS50-207ENST00000458530 LCORLQ8N3X6 602 aa10.55□□□□□ -0.72
VPS50-207ENST00000458530 ATP8A2Q9NTI2 1148 aa10.55□□□□□ -0.72
VPS50-207ENST00000458530 HPS5Q9UPZ3 1129 aa10.55□□□□□ -0.72
VPS50-207ENST00000458530 ZNF646O15015 1829 aaPredicted RBP10.55□□□□□ -0.72
VPS50-207ENST00000458530 MROH7-TTC4A0A0A0MT08 1334 aa10.55□□□□□ -0.72
VPS50-207ENST00000458530 PRDX5P30044 214 aa10.54□□□□□ -0.72
VPS50-207ENST00000458530 FKBP1AP62942 108 aaKnown RBP10.54□□□□□ -0.72
VPS50-207ENST00000458530 PKN2Q16513 984 aaKnown RBP10.54□□□□□ -0.72
VPS50-207ENST00000458530 NOM1Q5C9Z4 860 aaKnown RBP10.54□□□□□ -0.72
VPS50-207ENST00000458530 NOL8Q76FK4 1167 aaKnown RBP10.54□□□□□ -0.72
VPS50-207ENST00000458530 KRT26Q7Z3Y9 468 aa10.54□□□□□ -0.72
VPS50-207ENST00000458530 MIGA1Q8NAN2 632 aa10.54□□□□□ -0.72
VPS50-207ENST00000458530 SPRYD3Q8NCJ5 442 aa10.54□□□□□ -0.72
VPS50-207ENST00000458530 RIOK1Q9BRS2 568 aaKnown RBP10.54□□□□□ -0.72
VPS50-207ENST00000458530 KRT23Q9C075 422 aa10.54□□□□□ -0.72
VPS50-207ENST00000458530 ARPP21Q9UBL0 812 aaPredicted RBP10.54□□□□□ -0.72
VPS50-207ENST00000458530 DDX60LQ5H9U9 1706 aaKnown RBP10.53□□□□□ -0.72
VPS50-207ENST00000458530 GSG1L2A8MUP6 293 aa10.53□□□□□ -0.72
VPS50-207ENST00000458530 H7C1D1 291 aa10.53□□□□□ -0.72
VPS50-207ENST00000458530 RIMBP2O15034 1052 aa10.53□□□□□ -0.72
VPS50-207ENST00000458530 FOXP2O15409 715 aa10.53□□□□□ -0.72
VPS50-207ENST00000458530 RPS12P25398 132 aaKnown RBP10.53□□□□□ -0.72
VPS50-207ENST00000458530 HAND2P61296 217 aa10.53□□□□□ -0.72
VPS50-207ENST00000458530 SART3Q15020 963 aaKnown RBP10.53□□□□□ -0.72
VPS50-207ENST00000458530 SAMD7Q7Z3H4 446 aa10.53□□□□□ -0.72
VPS50-207ENST00000458530 FBXL16Q8N461 479 aa10.53□□□□□ -0.72
VPS50-207ENST00000458530 C2orf69Q8N8R5 385 aa10.53□□□□□ -0.72
VPS50-207ENST00000458530 MTA3Q9BTC8 594 aa10.53□□□□□ -0.72
VPS50-207ENST00000458530 POLR2AP24928 1970 aaKnown RBP10.52□□□□□ -0.72
VPS50-207ENST00000458530 SCN9AQ15858 1988 aa10.52□□□□□ -0.72
VPS50-207ENST00000458530 ADM5C9JUS6 153 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 PSMD14O00487 310 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 PTMSP20962 102 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 DDIT3P35638 169 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 ZNF157P51786 506 aaPredicted RBP10.52□□□□□ -0.73
VPS50-207ENST00000458530 EMP3P54852 163 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 PPP4CP60510 307 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 GTF2IP78347 998 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 AKNAD1Q5T1N1 836 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 TTLL5Q6EMB2 1281 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 MFSD6Q6ZSS7 791 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 Q6ZUG5 572 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 STOX1Q6ZVD7 989 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 RASAL3Q86YV0 1011 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 STAG1Q8WVM7 1258 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 FBXW7Q969H0 707 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 TMEM87BQ96K49 555 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 EPB41L4AQ9HCS5 686 aaPredicted RBP10.52□□□□□ -0.73
VPS50-207ENST00000458530 AATFQ9NY61 560 aaKnown RBP eCLIP10.52□□□□□ -0.73
VPS50-207ENST00000458530 ANAPC4Q9UJX5 808 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 SMC3Q9UQE7 1217 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 KIF3AQ9Y496 699 aa10.52□□□□□ -0.73
VPS50-207ENST00000458530 HTTP42858 3142 aa10.51□□□□□ -0.73
VPS50-207ENST00000458530 ECE2O60344 883 aa10.51□□□□□ -0.73
VPS50-207ENST00000458530 CPA1P15085 419 aa10.51□□□□□ -0.73
VPS50-207ENST00000458530 PDCP20941 246 aa10.51□□□□□ -0.73
VPS50-207ENST00000458530 USP5P45974 858 aa10.51□□□□□ -0.73
VPS50-207ENST00000458530 PPARAQ07869 468 aa10.51□□□□□ -0.73
VPS50-207ENST00000458530 STRIP1Q5VSL9 837 aa10.51□□□□□ -0.73
VPS50-207ENST00000458530 ADGRA1Q86SQ6 560 aa10.51□□□□□ -0.73
VPS50-207ENST00000458530 MB21D2Q8IYB1 491 aaPredicted RBP10.51□□□□□ -0.73
VPS50-207ENST00000458530 GBP4Q96PP9 640 aa10.51□□□□□ -0.73
VPS50-207ENST00000458530 CFHR5Q9BXR6 569 aa10.51□□□□□ -0.73
VPS50-207ENST00000458530 AGXT2Q9BYV1 514 aa10.51□□□□□ -0.73
VPS50-207ENST00000458530 GAKO14976 1311 aa10.51□□□□□ -0.73
VPS50-207ENST00000458530 MYO3BQ8WXR4 1341 aa10.51□□□□□ -0.73
VPS50-207ENST00000458530 GPR75-ASB3A0A0A6YYF3 556 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 POTEB3A0JP26 581 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 ERICH2A1L162 156 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 PRC1O43663 620 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 DHX16O60231 1041 aaKnown RBP10.5□□□□□ -0.73
VPS50-207ENST00000458530 DYNLL1P63167 89 aaKnown RBP10.5□□□□□ -0.73
VPS50-207ENST00000458530 FKBP1BP68106 108 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 EXOSC10Q01780 885 aaKnown RBP10.5□□□□□ -0.73
VPS50-207ENST00000458530 TOB2Q14106 344 aaPredicted RBP10.5□□□□□ -0.73
VPS50-207ENST00000458530 RAB3GAP1Q15042 981 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 DOK7Q18PE1 504 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 TBC1D10BQ4KMP7 808 aaPredicted RBP10.5□□□□□ -0.73
VPS50-207ENST00000458530 SBK1Q52WX2 424 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 HABP4Q5JVS0 413 aaKnown RBP10.5□□□□□ -0.73
VPS50-207ENST00000458530 POTEBQ6S5H4 581 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 ZNF384Q8TF68 577 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 SDR42E1Q8WUS8 393 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 ZNF296Q8WUU4 475 aaPredicted RBP10.5□□□□□ -0.73
VPS50-207ENST00000458530 ESR2Q92731 530 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 ZNF274Q96GC6 653 aaPredicted RBP10.5□□□□□ -0.73
VPS50-207ENST00000458530 ZNF287Q9HBT7 754 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 JAG2Q9Y219 1238 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 TAF6LQ9Y6J9 622 aa10.5□□□□□ -0.73
VPS50-207ENST00000458530 MKI67P46013 3256 aaKnown RBP10.5□□□□□ -0.73
VPS50-207ENST00000458530 MYH6P13533 1939 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms