RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CHRDL2Q6WN34 429 aa26.31■■□□□ 1.8
CPNE1-220ENST00000458038 MTMR2Q13614 643 aa26.3■■□□□ 1.8
CPNE1-220ENST00000458038 ITPRIPQ8IWB1 547 aa26.3■■□□□ 1.8
CPNE1-220ENST00000458038 GJD2Q9UKL4 321 aa26.3■■□□□ 1.8
CPNE1-220ENST00000458038 PALD1Q9ULE6 856 aa26.3■■□□□ 1.8
CPNE1-220ENST00000458038 ADGRA1Q86SQ6 560 aa26.29■■□□□ 1.8
CPNE1-220ENST00000458038 ANKLE1Q8NAG6 615 aa26.29■■□□□ 1.8
CPNE1-220ENST00000458038 GTF3C2Q8WUA4 911 aaPredicted RBP26.29■■□□□ 1.8
CPNE1-220ENST00000458038 DBNLQ9UJU6 430 aaKnown RBP26.29■■□□□ 1.8
CPNE1-220ENST00000458038 CYP7A1P22680 504 aa26.28■■□□□ 1.8
CPNE1-220ENST00000458038 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.28■■□□□ 1.86e-9■□□□□ 10.4
CPNE1-220ENST00000458038 DNAJC18Q9H819 358 aa26.28■■□□□ 1.8
CPNE1-220ENST00000458038 PIH1D3Q9NQM4 214 aaKnown RBP26.28■■□□□ 1.8
CPNE1-220ENST00000458038 MYH1P12882 1939 aa26.27■■□□□ 1.8
CPNE1-220ENST00000458038 EVI5O60447 810 aa26.27■■□□□ 1.8
CPNE1-220ENST00000458038 ERC1Q8IUD2 1116 aa26.27■■□□□ 1.8
CPNE1-220ENST00000458038 C1orf115Q9H7X2 142 aa26.27■■□□□ 1.8
CPNE1-220ENST00000458038 ZBTB21Q9ULJ3 1066 aa26.27■■□□□ 1.8
CPNE1-220ENST00000458038 RPTORQ8N122 1335 aa26.27■■□□□ 1.8
CPNE1-220ENST00000458038 NECAB2Q7Z6G3 386 aa26.26■■□□□ 1.79
CPNE1-220ENST00000458038 GPRC5AQ8NFJ5 357 aa26.26■■□□□ 1.79
CPNE1-220ENST00000458038 EAF2Q96CJ1 260 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-220ENST00000458038 P2RX7Q99572 595 aaKnown RBP26.26■■□□□ 1.79
CPNE1-220ENST00000458038 CCDC8Q9H0W5 538 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-220ENST00000458038 HMX1Q9NP08 348 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-220ENST00000458038 RBM27Q9P2N5 1060 aaKnown RBP26.26■■□□□ 1.79
CPNE1-220ENST00000458038 IDH1O75874 414 aaKnown RBP26.25■■□□□ 1.79
CPNE1-220ENST00000458038 HERVK_113P62684 666 aa26.25■■□□□ 1.79
CPNE1-220ENST00000458038 HNRNPUQ00839 825 aaKnown RBP eCLIP26.25■■□□□ 1.79
CPNE1-220ENST00000458038 TRMT44Q8IYL2 757 aaKnown RBP26.25■■□□□ 1.79
CPNE1-220ENST00000458038 XRCC5P13010 732 aaKnown RBP26.24■■□□□ 1.79
CPNE1-220ENST00000458038 MAPK4P31152 587 aa26.24■■□□□ 1.79
CPNE1-220ENST00000458038 JAG1P78504 1218 aa26.24■■□□□ 1.79
CPNE1-220ENST00000458038 MAP3K12Q12852 859 aa26.24■■□□□ 1.79
CPNE1-220ENST00000458038 USP17L2Q6R6M4 530 aa26.24■■□□□ 1.79
CPNE1-220ENST00000458038 SOCS4Q8WXH5 440 aa26.24■■□□□ 1.79
CPNE1-220ENST00000458038 NUDT12Q9BQG2 462 aa26.24■■□□□ 1.79
CPNE1-220ENST00000458038 PRO3102Q9H379 93 aa26.24■■□□□ 1.79
CPNE1-220ENST00000458038 SAP30BPQ9UHR5 308 aaKnown RBP26.24■■□□□ 1.79
CPNE1-220ENST00000458038 A0A1W2PPC1 479 aa26.23■■□□□ 1.79
CPNE1-220ENST00000458038 GDF11O95390 407 aa26.23■■□□□ 1.79
CPNE1-220ENST00000458038 RLBP1P12271 317 aa26.23■■□□□ 1.79
CPNE1-220ENST00000458038 USP5P45974 858 aa26.23■■□□□ 1.79
CPNE1-220ENST00000458038 DYNLL1P63167 89 aaKnown RBP26.23■■□□□ 1.79
CPNE1-220ENST00000458038 HSP90AB4PQ58FF6 505 aa26.23■■□□□ 1.79
CPNE1-220ENST00000458038 PAWRQ96IZ0 340 aaKnown RBP26.23■■□□□ 1.79
CPNE1-220ENST00000458038 EHD4Q9H223 541 aa26.23■■□□□ 1.79
CPNE1-220ENST00000458038 TLR7Q9NYK1 1049 aaKnown RBP26.23■■□□□ 1.79
CPNE1-220ENST00000458038 SZT2Q5T011 3432 aa26.23■■□□□ 1.79
CPNE1-220ENST00000458038 PDE3AQ14432 1141 aa26.22■■□□□ 1.79
CPNE1-220ENST00000458038 TATDN1Q6P1N9 297 aa26.22■■□□□ 1.79
CPNE1-220ENST00000458038 CEP85Q6P2H3 762 aa26.22■■□□□ 1.79
CPNE1-220ENST00000458038 TTC6Q86TZ1 520 aa26.22■■□□□ 1.79
CPNE1-220ENST00000458038 CCAR1Q8IX12 1150 aaKnown RBP26.22■■□□□ 1.79
CPNE1-220ENST00000458038 SERPINB13Q9UIV8 391 aa26.22■■□□□ 1.79
CPNE1-220ENST00000458038 PLXNB2O15031 1838 aa26.22■■□□□ 1.79
CPNE1-220ENST00000458038 MAGEB6Q8N7X4 407 aa26.21■■□□□ 1.79
CPNE1-220ENST00000458038 RBPJLQ9UBG7 517 aa26.21■■□□□ 1.79
CPNE1-220ENST00000458038 ERVK-9P63128 1117 aa26.2■■□□□ 1.78
CPNE1-220ENST00000458038 ERVK-24P63145 666 aa26.2■■□□□ 1.78
CPNE1-220ENST00000458038 MIGA1Q8NAN2 632 aa26.2■■□□□ 1.78
CPNE1-220ENST00000458038 C12orf42Q96LP6 360 aa26.2■■□□□ 1.78
CPNE1-220ENST00000458038 EMILIN3Q9NT22 766 aa26.2■■□□□ 1.78
CPNE1-220ENST00000458038 GH2P01242 217 aa26.19■■□□□ 1.78
CPNE1-220ENST00000458038 MS4A1P11836 297 aa26.19■■□□□ 1.78
CPNE1-220ENST00000458038 USP14P54578 494 aa26.19■■□□□ 1.78
CPNE1-220ENST00000458038 TTF1Q15361 905 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-220ENST00000458038 MAP3K21Q5TCX8 1036 aa26.19■■□□□ 1.78
CPNE1-220ENST00000458038 NBPF3Q9H094 633 aa26.19■■□□□ 1.78
CPNE1-220ENST00000458038 TXNRD2Q9NNW7 524 aa26.19■■□□□ 1.78
CPNE1-220ENST00000458038 CYP2B6P20813 491 aa26.18■■□□□ 1.78
CPNE1-220ENST00000458038 AACSQ86V21 672 aa26.18■■□□□ 1.78
CPNE1-220ENST00000458038 TRIB2Q92519 343 aa26.18■■□□□ 1.78
CPNE1-220ENST00000458038 RABGAP1Q9Y3P9 1069 aa26.18■■□□□ 1.78
CPNE1-220ENST00000458038 USP17L15C9J2P7 530 aa26.17■■□□□ 1.78
CPNE1-220ENST00000458038 USP17L13C9JLJ4 530 aa26.17■■□□□ 1.78
CPNE1-220ENST00000458038 USP17L11C9JVI0 530 aa26.17■■□□□ 1.78
CPNE1-220ENST00000458038 USP17L18D6R9N7 530 aa26.17■■□□□ 1.78
CPNE1-220ENST00000458038 USP17L22D6RA61 530 aa26.17■■□□□ 1.78
CPNE1-220ENST00000458038 USP17L17D6RBQ6 530 aa26.17■■□□□ 1.78
CPNE1-220ENST00000458038 USP17L19D6RCP7 530 aa26.17■■□□□ 1.78
CPNE1-220ENST00000458038 USP17L20D6RJB6 530 aa26.17■■□□□ 1.78
CPNE1-220ENST00000458038 CCNA1P78396 465 aa26.17■■□□□ 1.78
CPNE1-220ENST00000458038 USP17L24Q0WX57 530 aa26.17■■□□□ 1.78
CPNE1-220ENST00000458038 SHROOM1Q2M3G4 852 aaPredicted RBP26.17■■□□□ 1.78
CPNE1-220ENST00000458038 CERKLQ49MI3 558 aaPredicted RBP26.17■■□□□ 1.78
CPNE1-220ENST00000458038 FEZ1Q99689 392 aa26.17■■□□□ 1.78
CPNE1-220ENST00000458038 CABP5Q9NP86 173 aa26.17■■□□□ 1.78
CPNE1-220ENST00000458038 OGDHLQ9ULD0 1010 aa26.17■■□□□ 1.78
CPNE1-220ENST00000458038 GLRX3O76003 335 aaKnown RBP26.16■■□□□ 1.78
CPNE1-220ENST00000458038 RGS2P41220 211 aa26.16■■□□□ 1.78
CPNE1-220ENST00000458038 PLEKHH3Q7Z736 793 aa26.16■■□□□ 1.78
CPNE1-220ENST00000458038 USP6NLQ92738 828 aa26.16■■□□□ 1.78
CPNE1-220ENST00000458038 KIAA1683Q9H0B3 1180 aa26.16■■□□□ 1.78
CPNE1-220ENST00000458038 EXOC6BQ9Y2D4 811 aa26.16■■□□□ 1.78
CPNE1-220ENST00000458038 ALPK3Q96L96 1907 aa26.16■■□□□ 1.78
CPNE1-220ENST00000458038 PRKAR2AP13861 404 aaKnown RBP26.15■■□□□ 1.78
CPNE1-220ENST00000458038 ZKSCAN1P17029 563 aaPredicted RBP26.15■■□□□ 1.78
CPNE1-220ENST00000458038 TRIM32Q13049 653 aa26.15■■□□□ 1.78
CPNE1-220ENST00000458038 ABCB5Q2M3G0 1257 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms