RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 CRACR2BQ8N4Y2 399 aaPredicted RBP12.56□□□□□ -0.4
RFX3-211ENST00000458034 TRIML1Q8N9V2 468 aa12.56□□□□□ -0.4
RFX3-211ENST00000458034 KIF18AQ8NI77 898 aa12.56□□□□□ -0.4
RFX3-211ENST00000458034 ERCC4Q92889 916 aaPredicted RBP12.56□□□□□ -0.4
RFX3-211ENST00000458034 MYL10Q9BUA6 226 aa12.56□□□□□ -0.4
RFX3-211ENST00000458034 SENP2Q9HC62 589 aa12.56□□□□□ -0.4
RFX3-211ENST00000458034 BRMS1Q9HCU9 246 aa12.56□□□□□ -0.4
RFX3-211ENST00000458034 RAI14Q9P0K7 980 aa12.56□□□□□ -0.4
RFX3-211ENST00000458034 CGNQ9P2M7 1197 aaKnown RBP12.56□□□□□ -0.4
RFX3-211ENST00000458034 ZNF804BA4D1E1 1349 aa12.56□□□□□ -0.4
RFX3-211ENST00000458034 CACNA1SQ13698 1873 aa12.55□□□□□ -0.4
RFX3-211ENST00000458034 KIAA1551Q9HCM1 1747 aa12.55□□□□□ -0.4
RFX3-211ENST00000458034 A0A087WWV3 80 aa12.55□□□□□ -0.4
RFX3-211ENST00000458034 PRKAB2O43741 272 aa12.55□□□□□ -0.4
RFX3-211ENST00000458034 PTPREP23469 700 aa12.55□□□□□ -0.4
RFX3-211ENST00000458034 NT5C2P49902 561 aa12.55□□□□□ -0.4
RFX3-211ENST00000458034 NCAPHQ15003 741 aa12.55□□□□□ -0.4
RFX3-211ENST00000458034 SF3B3Q15393 1217 aaKnown RBP12.55□□□□□ -0.4
RFX3-211ENST00000458034 CT47A1Q5JQC4 288 aaPredicted RBP12.55□□□□□ -0.4
RFX3-211ENST00000458034 CATIPQ7Z7H3 387 aa12.55□□□□□ -0.4
RFX3-211ENST00000458034 NBPF11Q86T75 865 aa12.55□□□□□ -0.4
RFX3-211ENST00000458034 FANCBQ8NB91 859 aa12.55□□□□□ -0.4
RFX3-211ENST00000458034 BRIP1Q9BX63 1249 aa12.55□□□□□ -0.4
RFX3-211ENST00000458034 BCL11BQ9C0K0 894 aaPredicted RBP12.55□□□□□ -0.4
RFX3-211ENST00000458034 IGSF3O75054 1194 aa12.54□□□□□ -0.4
RFX3-211ENST00000458034 SERPINC1P01008 464 aa12.54□□□□□ -0.4
RFX3-211ENST00000458034 PRKCSHP14314 528 aaPredicted RBP12.54□□□□□ -0.4
RFX3-211ENST00000458034 UBASH3AP57075 661 aa12.54□□□□□ -0.4
RFX3-211ENST00000458034 PNOCQ13519 176 aa12.54□□□□□ -0.4
RFX3-211ENST00000458034 IQCA1Q86XH1 822 aa12.54□□□□□ -0.4
RFX3-211ENST00000458034 MLKLQ8NB16 471 aa12.54□□□□□ -0.4
RFX3-211ENST00000458034 NUP133Q8WUM0 1156 aa12.54□□□□□ -0.4
RFX3-211ENST00000458034 ZNF592Q92610 1267 aa12.54□□□□□ -0.4
RFX3-211ENST00000458034 SMARCE1Q969G3 411 aa12.54□□□□□ -0.4
RFX3-211ENST00000458034 FBXO2Q9UK22 296 aaPredicted RBP12.54□□□□□ -0.4
RFX3-211ENST00000458034 SRPRBQ9Y5M8 271 aaKnown RBP12.54□□□□□ -0.4
RFX3-211ENST00000458034 PDS5AQ29RF7 1337 aaKnown RBP12.54□□□□□ -0.4
RFX3-211ENST00000458034 BAZ2AQ9UIF9 1905 aaKnown RBP12.54□□□□□ -0.4
RFX3-211ENST00000458034 MINDY4BA8MYZ0 360 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 BTBD18B2RXH4 712 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 DDAH1O94760 285 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 LMOD1P29536 600 aaPredicted RBP12.53□□□□□ -0.4
RFX3-211ENST00000458034 KRT2P35908 639 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 ITPK1Q13572 414 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 ARID5BQ14865 1188 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 POSTNQ15063 836 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 METTL16Q86W50 562 aaKnown RBP12.53□□□□□ -0.4
RFX3-211ENST00000458034 FCHSD1Q86WN1 690 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 SMAP1Q8IYB5 467 aaPredicted RBP12.53□□□□□ -0.4
RFX3-211ENST00000458034 MIGA1Q8NAN2 632 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 NKX2-3Q8TAU0 364 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 ACSBG1Q96GR2 724 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 CLIC6Q96NY7 704 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 NYXQ9GZU5 481 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 BSDC1Q9NW68 430 aaPredicted RBP12.53□□□□□ -0.4
RFX3-211ENST00000458034 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 TNKSO95271 1327 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 COL24A1Q17RW2 1714 aa12.53□□□□□ -0.4
RFX3-211ENST00000458034 TRIM75PA6NK02 468 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 PRPF3O43395 683 aaKnown RBP12.52□□□□□ -0.41
RFX3-211ENST00000458034 TOP1P11387 765 aaKnown RBP12.52□□□□□ -0.41
RFX3-211ENST00000458034 SEC23AQ15436 765 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 CFAP100Q494V2 611 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 LONRF3Q496Y0 759 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 IFIT1BQ5T764 474 aaKnown RBP12.52□□□□□ -0.41
RFX3-211ENST00000458034 STK11IPQ8N1F8 1099 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 ERO1AQ96HE7 468 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 ZSCAN10Q96SZ4 725 aaPredicted RBP12.52□□□□□ -0.41
RFX3-211ENST00000458034 FEZ1Q99689 392 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 PYM1Q9BRP8 204 aaKnown RBP12.52□□□□□ -0.41
RFX3-211ENST00000458034 ZKSCAN3Q9BRR0 538 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 INCENPQ9NQS7 918 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 TAOK2Q9UL54 1235 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 KCNJ14Q9UNX9 436 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 TACC3Q9Y6A5 838 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 SPATA31A5Q5VU36 1347 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 SPATA31A7Q8IWB4 1347 aa12.52□□□□□ -0.41
RFX3-211ENST00000458034 KDM4FA0A1W2PPD8 638 aa12.51□□□□□ -0.41
RFX3-211ENST00000458034 SLU7O95391 586 aaKnown RBP12.51□□□□□ -0.41
RFX3-211ENST00000458034 TOB1P50616 345 aaPredicted RBP12.51□□□□□ -0.41
RFX3-211ENST00000458034 NCBP1Q09161 790 aaKnown RBP12.51□□□□□ -0.41
RFX3-211ENST00000458034 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
RFX3-211ENST00000458034 NT5DC1Q5TFE4 455 aa12.51□□□□□ -0.41
RFX3-211ENST00000458034 ARMCX5Q6P1M9 558 aa12.51□□□□□ -0.41
RFX3-211ENST00000458034 VSTM4Q8IW00 320 aa12.51□□□□□ -0.41
RFX3-211ENST00000458034 MARCH10Q8NA82 808 aaPredicted RBP12.51□□□□□ -0.41
RFX3-211ENST00000458034 ENOX1Q8TC92 643 aaKnown RBP12.51□□□□□ -0.41
RFX3-211ENST00000458034 TSC1Q92574 1164 aa12.51□□□□□ -0.41
RFX3-211ENST00000458034 FERMT2Q96AC1 680 aa12.51□□□□□ -0.41
RFX3-211ENST00000458034 PPP1R13BQ96KQ4 1090 aa12.51□□□□□ -0.41
RFX3-211ENST00000458034 CRNKL1Q9BZJ0 848 aaKnown RBP12.51□□□□□ -0.41
RFX3-211ENST00000458034 ANKRD2Q9GZV1 360 aa12.51□□□□□ -0.41
RFX3-211ENST00000458034 TRMT1Q9NXH9 659 aaKnown RBP12.51□□□□□ -0.41
RFX3-211ENST00000458034 AATFQ9NY61 560 aaKnown RBP eCLIP12.51□□□□□ -0.41
RFX3-211ENST00000458034 MAN1B1Q9UKM7 699 aa12.51□□□□□ -0.41
RFX3-211ENST00000458034 PCDHA5Q9Y5H7 936 aa12.51□□□□□ -0.41
RFX3-211ENST00000458034 CNTNAP4Q9C0A0 1308 aa12.51□□□□□ -0.41
RFX3-211ENST00000458034 GOLGA6L9A6NEM1 432 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms