RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 LZTS2Q9BRK4 669 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 TTF2Q9UNY4 1162 aaKnown RBP13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 DDX39AO00148 427 aaKnown RBP13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 PPP1R7Q15435 360 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 CALCRLQ16602 461 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 NELFCDQ8IXH7 590 aa13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 NAPGQ99747 312 aaPredicted RBP13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 PUS3Q9BZE2 481 aaKnown RBP13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 MTRF1LQ9UGC7 380 aaKnown RBP13.11□□□□□ -0.31
SMARCAD1-204ENST00000457823 ARHGAP6O43182 974 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 SPOPO43791 374 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 MAGEA1P43355 309 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 MTX1Q13505 466 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 VWA3BQ502W6 1294 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 WDR44Q5JSH3 913 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 TICAM2Q86XR7 235 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 TIGD1Q96MW7 591 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 SELENOSQ9BQE4 189 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 SMCO2A6NFE2 343 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 RIOK3O14730 519 aaKnown RBP13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 CABP7Q86V35 215 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 FMNL3Q8IVF7 1028 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 ARFGAP2Q8N6H7 521 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 KIAA1468Q9P260 1216 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 DBNLQ9UJU6 430 aaKnown RBP13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 GINS2Q9Y248 185 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 METP08581 1390 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 NR1I2O75469 434 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 MNAT1P51948 309 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 PNOCQ13519 176 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 LONRF3Q496Y0 759 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 TSGA10Q9BZW7 698 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 USP21Q9UK80 565 aa13.1□□□□□ -0.31
SMARCAD1-204ENST00000457823 BTBD18B2RXH4 712 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 TMTC1Q8IUR5 882 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 NOSTRINQ8IVI9 506 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 MSANTD4Q8NCY6 345 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 XPO4Q9C0E2 1151 aaKnown RBP13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 USP40Q9NVE5 1235 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 ASAP1Q9ULH1 1129 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 PFKFB1P16118 471 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 IPO4Q8TEX9 1081 aaKnown RBP13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 GREM2Q9H772 168 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 SERPINA10Q9UK55 444 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 PFKFB2O60825 505 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 IVLP07476 585 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 PHKA1P46020 1223 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 MAP3K9P80192 1104 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 PRKG1Q13976 671 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 ADCK5Q3MIX3 580 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 SLC9C1Q4G0N8 1177 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 CPLX4Q7Z7G2 160 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 ARHGEF25Q86VW2 580 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 NSRP1Q9H0G5 558 aaKnown RBP13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 STMN4Q9H169 189 aaPredicted RBP13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 IMPACTQ9P2X3 320 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 TNKSO95271 1327 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 EBAG9O00559 213 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 PDE8BO95263 885 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 PPM1FP49593 454 aaPredicted RBP13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 ZBTB16Q05516 673 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 UTP14CQ5TAP6 766 aaKnown RBP13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 C6orf163Q5TEZ5 329 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 NELFBQ8WX92 580 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 ARPP21Q9UBL0 812 aaPredicted RBP13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 BIN2Q9UBW5 565 aaPredicted RBP13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 STAP2Q9UGK3 403 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 ERBB4Q15303 1308 aa13.09□□□□□ -0.31
SMARCAD1-204ENST00000457823 SLF1Q9BQI6 1058 aa13.08□□□□□ -0.31
SMARCAD1-204ENST00000457823 STX10O60499 249 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 EXOC3O60645 756 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 MYCT1Q8N699 235 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 MAP4K1Q92918 833 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 JAKMIP2Q96AA8 810 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 IFT74Q96LB3 600 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 CCDC114Q96M63 670 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 PSMB7Q99436 277 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 NUP58Q9BVL2 599 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 TMOD4Q9NZQ9 345 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 CA8P35219 290 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 DLGAP5Q15398 846 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 HDXQ7Z353 690 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 CCDC84Q86UT8 332 aaPredicted RBP13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 PNMA1Q8ND90 353 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 ZSCAN10Q96SZ4 725 aaPredicted RBP13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 FERP16591 822 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 ADORA1P30542 326 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 CCDC63Q8NA47 563 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 CCDC26Q8TAB7 109 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 KCNK9Q9NPC2 374 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 YEATS2Q9ULM3 1422 aa13.08□□□□□ -0.32
SMARCAD1-204ENST00000457823 PRAMEF22A3QJZ6 481 aa13.07□□□□□ -0.32
SMARCAD1-204ENST00000457823 ARL1P40616 181 aaPredicted RBP13.07□□□□□ -0.32
SMARCAD1-204ENST00000457823 SEL1L2Q5TEA6 688 aa13.07□□□□□ -0.32
SMARCAD1-204ENST00000457823 FAM207AQ9NSI2 230 aaPredicted RBP13.07□□□□□ -0.32
SMARCAD1-204ENST00000457823 SSH2Q76I76 1423 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms