RNA–Protein interactions for RNA: ENST00000457586.1

PRNP-204, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 855 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-204ENST00000457586 TREML2Q5T2D2 321 aa28.45■■■□□ 2.14
PRNP-204ENST00000457586 LCORLQ8N3X6 602 aa28.45■■■□□ 2.14
PRNP-204ENST00000457586 GPATCH3Q96I76 525 aa28.45■■■□□ 2.14
PRNP-204ENST00000457586 CRBNQ96SW2 442 aa28.45■■■□□ 2.14
PRNP-204ENST00000457586 PNMA3Q9UL41 463 aa28.45■■■□□ 2.14
PRNP-204ENST00000457586 GDF11O95390 407 aa28.44■■■□□ 2.14
PRNP-204ENST00000457586 PLCD1P51178 756 aa28.44■■■□□ 2.14
PRNP-204ENST00000457586 GABPAQ06546 454 aa28.44■■■□□ 2.14
PRNP-204ENST00000457586 SLC4A8Q2Y0W8 1093 aa28.44■■■□□ 2.14
PRNP-204ENST00000457586 ZSCAN25Q6NSZ9 544 aa28.44■■■□□ 2.14
PRNP-204ENST00000457586 TRIM47Q96LD4 638 aa28.44■■■□□ 2.14
PRNP-204ENST00000457586 DCP1AQ9NPI6 582 aaPredicted RBP28.44■■■□□ 2.14
PRNP-204ENST00000457586 PTCH2Q9Y6C5 1203 aa28.44■■■□□ 2.14
PRNP-204ENST00000457586 C19orf81C9J6K1 198 aa28.43■■■□□ 2.14
PRNP-204ENST00000457586 PSMC4P43686 418 aa28.43■■■□□ 2.14
PRNP-204ENST00000457586 PABPC4Q13310 644 aaKnown RBP eCLIP28.43■■■□□ 2.14
PRNP-204ENST00000457586 SHROOM1Q2M3G4 852 aaPredicted RBP28.43■■■□□ 2.14
PRNP-204ENST00000457586 AAMPQ13685 434 aa28.42■■■□□ 2.14
PRNP-204ENST00000457586 SDR42E1Q8WUS8 393 aa28.42■■■□□ 2.14
PRNP-204ENST00000457586 ARMT1Q9H993 441 aa28.42■■■□□ 2.14
PRNP-204ENST00000457586 ATP8A2Q9NTI2 1148 aa28.42■■■□□ 2.14
PRNP-204ENST00000457586 MCM9Q9NXL9 1143 aa28.42■■■□□ 2.14
PRNP-204ENST00000457586 SRRDQ9UH36 339 aa28.42■■■□□ 2.14
PRNP-204ENST00000457586 KIAA0100Q14667 2235 aaKnown RBP28.41■■■□□ 2.14
PRNP-204ENST00000457586 USP17L10C9JJH3 530 aa28.41■■■□□ 2.14
PRNP-204ENST00000457586 MBD4O95243 580 aa28.41■■■□□ 2.14
PRNP-204ENST00000457586 POLR3DP05423 398 aaPredicted RBP28.41■■■□□ 2.14
PRNP-204ENST00000457586 SHMT1P34896 483 aa28.41■■■□□ 2.14
PRNP-204ENST00000457586 MTMR2Q13614 643 aa28.41■■■□□ 2.14
PRNP-204ENST00000457586 SLFNL1Q499Z3 407 aa28.41■■■□□ 2.14
PRNP-204ENST00000457586 SMCR8Q8TEV9 937 aaPredicted RBP28.41■■■□□ 2.14
PRNP-204ENST00000457586 TTC41PQ6P2S7 1318 aa28.41■■■□□ 2.14
PRNP-204ENST00000457586 GH2P01242 217 aa28.4■■■□□ 2.14
PRNP-204ENST00000457586 HOXD10P28358 340 aa28.4■■■□□ 2.14
PRNP-204ENST00000457586 HOXA7P31268 230 aaPredicted RBP28.4■■■□□ 2.14
PRNP-204ENST00000457586 CERKLQ49MI3 558 aaPredicted RBP28.4■■■□□ 2.14
PRNP-204ENST00000457586 KBTBD3Q8NAB2 608 aa28.4■■■□□ 2.14
PRNP-204ENST00000457586 ZNF333Q96JL9 665 aa28.4■■■□□ 2.14
PRNP-204ENST00000457586 OSBPP22059 807 aa28.39■■■□□ 2.14
PRNP-204ENST00000457586 GCLCP48506 637 aaPredicted RBP28.39■■■□□ 2.14
PRNP-204ENST00000457586 SLC9C1Q4G0N8 1177 aa28.39■■■□□ 2.14
PRNP-204ENST00000457586 NBPF11Q86T75 865 aa28.39■■■□□ 2.14
PRNP-204ENST00000457586 BAZ2AQ9UIF9 1905 aaKnown RBP28.38■■■□□ 2.13
PRNP-204ENST00000457586 CHGBP05060 677 aa28.38■■■□□ 2.13
PRNP-204ENST00000457586 FCGRTP55899 365 aa28.38■■■□□ 2.13
PRNP-204ENST00000457586 HDAC1Q13547 482 aaPredicted RBP28.38■■■□□ 2.13
PRNP-204ENST00000457586 FAM110CQ1W6H9 321 aa28.38■■■□□ 2.13
PRNP-204ENST00000457586 TMOD4Q9NZQ9 345 aa28.38■■■□□ 2.13
PRNP-204ENST00000457586 FMNL1O95466 1100 aaPredicted RBP28.37■■■□□ 2.13
PRNP-204ENST00000457586 ABCB5Q2M3G0 1257 aa28.37■■■□□ 2.13
PRNP-204ENST00000457586 PUS7LQ9H0K6 701 aaKnown RBP28.37■■■□□ 2.13
PRNP-204ENST00000457586 ASCC2Q9H1I8 757 aaPredicted RBP28.37■■■□□ 2.13
PRNP-204ENST00000457586 PRKAB2O43741 272 aa28.36■■■□□ 2.13
PRNP-204ENST00000457586 TSHZ3Q63HK5 1081 aa28.36■■■□□ 2.13
PRNP-204ENST00000457586 C12orf42Q96LP6 360 aa28.36■■■□□ 2.13
PRNP-204ENST00000457586 TNRC18O15417 2968 aaPredicted RBP28.36■■■□□ 2.13
PRNP-204ENST00000457586 EVX2Q03828 476 aa28.35■■■□□ 2.13
PRNP-204ENST00000457586 USP17L2Q6R6M4 530 aa28.35■■■□□ 2.13
PRNP-204ENST00000457586 PI4K2BQ8TCG2 481 aa28.35■■■□□ 2.13
PRNP-204ENST00000457586 GCC1Q96CN9 775 aa28.35■■■□□ 2.13
PRNP-204ENST00000457586 CABP5Q9NP86 173 aa28.35■■■□□ 2.13
PRNP-204ENST00000457586 EMILIN3Q9NT22 766 aa28.35■■■□□ 2.13
PRNP-204ENST00000457586 SWAP70Q9UH65 585 aa28.35■■■□□ 2.13
PRNP-204ENST00000457586 MYH8P13535 1937 aa28.34■■■□□ 2.13
PRNP-204ENST00000457586 ERC2O15083 957 aa28.34■■■□□ 2.13
PRNP-204ENST00000457586 ZFYP08048 801 aaPredicted RBP28.34■■■□□ 2.13
PRNP-204ENST00000457586 ANKRD13CQ8N6S4 541 aa28.34■■■□□ 2.13
PRNP-204ENST00000457586 MYPNQ86TC9 1320 aa28.34■■■□□ 2.13
PRNP-204ENST00000457586 SALL3Q9BXA9 1300 aa28.34■■■□□ 2.13
PRNP-204ENST00000457586 PDE4DIPQ5VU43 2346 aa28.34■■■□□ 2.13
PRNP-204ENST00000457586 GLRX3O76003 335 aaKnown RBP28.33■■■□□ 2.13
PRNP-204ENST00000457586 GUCY1A2P33402 732 aa28.33■■■□□ 2.13
PRNP-204ENST00000457586 C12orf60Q5U649 245 aa28.33■■■□□ 2.13
PRNP-204ENST00000457586 APPBP2Q92624 585 aa28.33■■■□□ 2.13
PRNP-204ENST00000457586 KIAA1683Q9H0B3 1180 aa28.33■■■□□ 2.13
PRNP-204ENST00000457586 DOCK3Q8IZD9 2030 aa28.33■■■□□ 2.13
PRNP-204ENST00000457586 BRCA2P51587 3418 aa28.33■■■□□ 2.12
PRNP-204ENST00000457586 CYP2D6P10635 497 aa28.32■■■□□ 2.12
PRNP-204ENST00000457586 RAB3GAP1Q15042 981 aa28.32■■■□□ 2.12
PRNP-204ENST00000457586 OTUD7AQ8TE49 926 aaPredicted RBP28.32■■■□□ 2.12
PRNP-204ENST00000457586 STRBPQ96SI9 672 aaKnown RBP28.32■■■□□ 2.12
PRNP-204ENST00000457586 MORF4L1Q9UBU8 362 aa28.32■■■□□ 2.12
PRNP-204ENST00000457586 SLC4A4Q9Y6R1 1079 aa28.32■■■□□ 2.12
PRNP-204ENST00000457586 POTEFA5A3E0 1075 aa28.31■■■□□ 2.12
PRNP-204ENST00000457586 RNF113AO15541 343 aaKnown RBP28.31■■■□□ 2.12
PRNP-204ENST00000457586 MX1P20591 662 aa28.31■■■□□ 2.12
PRNP-204ENST00000457586 USP14P54578 494 aa28.31■■■□□ 2.12
PRNP-204ENST00000457586 IRX3P78415 501 aaPredicted RBP28.31■■■□□ 2.12
PRNP-204ENST00000457586 PRKCZQ05513 592 aa28.31■■■□□ 2.12
PRNP-204ENST00000457586 RAET1EQ8TD07 263 aa28.31■■■□□ 2.12
PRNP-204ENST00000457586 DDRGK1Q96HY6 314 aa28.31■■■□□ 2.12
PRNP-204ENST00000457586 USP17L12C9JPN9 530 aa28.3■■■□□ 2.12
PRNP-204ENST00000457586 USP17L21D6R901 530 aa28.3■■■□□ 2.12
PRNP-204ENST00000457586 ECM2O94769 699 aaPredicted RBP28.3■■■□□ 2.12
PRNP-204ENST00000457586 LRRFIP1Q32MZ4 808 aaKnown RBP28.3■■■□□ 2.12
PRNP-204ENST00000457586 AMOTL1Q8IY63 956 aa28.3■■■□□ 2.12
PRNP-204ENST00000457586 SH3TC2Q8TF17 1288 aa28.3■■■□□ 2.12
PRNP-204ENST00000457586 OSBP2Q969R2 916 aa28.3■■■□□ 2.12
PRNP-204ENST00000457586 P2RX7Q99572 595 aaKnown RBP28.3■■■□□ 2.12
PRNP-204ENST00000457586 TNPO2O14787 897 aaKnown RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms