RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 TAF1CQ15572 869 aaPredicted RBP14.71□□□□□ -0.05
C9orf139-201ENST00000457302 ABCB5Q2M3G0 1257 aa14.71□□□□□ -0.05
C9orf139-201ENST00000457302 C12orf60Q5U649 245 aa14.71□□□□□ -0.05
C9orf139-201ENST00000457302 TATDN1Q6P1N9 297 aa14.71□□□□□ -0.05
C9orf139-201ENST00000457302 GADL1Q6ZQY3 521 aa14.71□□□□□ -0.05
C9orf139-201ENST00000457302 IFNL3Q8IZI9 196 aa14.71□□□□□ -0.05
C9orf139-201ENST00000457302 ZNF280CQ8ND82 737 aa14.71□□□□□ -0.05
C9orf139-201ENST00000457302 NAPBQ9H115 298 aa14.71□□□□□ -0.05
C9orf139-201ENST00000457302 MKNK2Q9HBH9 465 aa14.71□□□□□ -0.05
C9orf139-201ENST00000457302 KCNH4Q9UQ05 1017 aa14.71□□□□□ -0.05
C9orf139-201ENST00000457302 AFG3L2Q9Y4W6 797 aa14.71□□□□□ -0.05
C9orf139-201ENST00000457302 DOCK1Q14185 1865 aa14.7□□□□□ -0.06
C9orf139-201ENST00000457302 TRIM75PA6NK02 468 aa14.7□□□□□ -0.06
C9orf139-201ENST00000457302 GSG1L2A8MUP6 293 aa14.7□□□□□ -0.06
C9orf139-201ENST00000457302 SDSP20132 328 aa14.7□□□□□ -0.06
C9orf139-201ENST00000457302 SPP2Q13103 211 aa14.7□□□□□ -0.06
C9orf139-201ENST00000457302 RAB3GAP1Q15042 981 aa14.7□□□□□ -0.06
C9orf139-201ENST00000457302 SBK1Q52WX2 424 aa14.7□□□□□ -0.06
C9orf139-201ENST00000457302 CTR9Q6PD62 1173 aa14.7□□□□□ -0.06
C9orf139-201ENST00000457302 BRI3BPQ8WY22 251 aa14.7□□□□□ -0.06
C9orf139-201ENST00000457302 SEC62Q99442 399 aaKnown RBP14.7□□□□□ -0.06
C9orf139-201ENST00000457302 ZCCHC17Q9NP64 241 aaKnown RBP14.7□□□□□ -0.06
C9orf139-201ENST00000457302 MYH8P13535 1937 aa14.7□□□□□ -0.06
C9orf139-201ENST00000457302 ATAD5Q96QE3 1844 aa14.69□□□□□ -0.06
C9orf139-201ENST00000457302 C19orf81C9J6K1 198 aa14.69□□□□□ -0.06
C9orf139-201ENST00000457302 USP17L10C9JJH3 530 aa14.69□□□□□ -0.06
C9orf139-201ENST00000457302 IGF2BP3O00425 579 aaKnown RBP eCLIP14.69□□□□□ -0.06
C9orf139-201ENST00000457302 GH2P01242 217 aa14.69□□□□□ -0.06
C9orf139-201ENST00000457302 PABPC4Q13310 644 aaKnown RBP eCLIP14.69□□□□□ -0.06
C9orf139-201ENST00000457302 TTC22Q5TAA0 569 aa14.69□□□□□ -0.06
C9orf139-201ENST00000457302 ERICH6BQ5W0A0 696 aa14.69□□□□□ -0.06
C9orf139-201ENST00000457302 ANKRD23Q86SG2 305 aa14.69□□□□□ -0.06
C9orf139-201ENST00000457302 CCDC17Q96LX7 622 aa14.69□□□□□ -0.06
C9orf139-201ENST00000457302 PTPN18Q99952 460 aa14.69□□□□□ -0.06
C9orf139-201ENST00000457302 WDR18Q9BV38 432 aa14.69□□□□□ -0.06
C9orf139-201ENST00000457302 TMOD4Q9NZQ9 345 aa14.69□□□□□ -0.06
C9orf139-201ENST00000457302 ZBTB21Q9ULJ3 1066 aa14.69□□□□□ -0.06
C9orf139-201ENST00000457302 BTBD19C9JJ37 291 aa14.68□□□□□ -0.06
C9orf139-201ENST00000457302 CYP2D6P10635 497 aa14.68□□□□□ -0.06
C9orf139-201ENST00000457302 PDE4AP27815 886 aa14.68□□□□□ -0.06
C9orf139-201ENST00000457302 CDK8P49336 464 aa14.68□□□□□ -0.06
C9orf139-201ENST00000457302 NMIQ13287 307 aaPredicted RBP14.68□□□□□ -0.06
C9orf139-201ENST00000457302 ARHGEF6Q15052 776 aa14.68□□□□□ -0.06
C9orf139-201ENST00000457302 ZNF444Q8N0Y2 327 aaPredicted RBP14.68□□□□□ -0.06
C9orf139-201ENST00000457302 CFHR5Q9BXR6 569 aa14.68□□□□□ -0.06
C9orf139-201ENST00000457302 DNAJC18Q9H819 358 aa14.68□□□□□ -0.06
C9orf139-201ENST00000457302 A0A0G2JLL6 359 aaPredicted RBP14.67□□□□□ -0.06
C9orf139-201ENST00000457302 GPR25O00155 361 aa14.67□□□□□ -0.06
C9orf139-201ENST00000457302 PDHXO00330 501 aa14.67□□□□□ -0.06
C9orf139-201ENST00000457302 FKTNO75072 461 aa14.67□□□□□ -0.06
C9orf139-201ENST00000457302 SHMT1P34896 483 aa14.67□□□□□ -0.06
C9orf139-201ENST00000457302 GABPAQ06546 454 aa14.67□□□□□ -0.06
C9orf139-201ENST00000457302 PDE4BQ07343 736 aa14.67□□□□□ -0.06
C9orf139-201ENST00000457302 RRP1BQ14684 758 aaKnown RBP14.67□□□□□ -0.06
C9orf139-201ENST00000457302 CWC27Q6UX04 472 aaKnown RBP14.67□□□□□ -0.06
C9orf139-201ENST00000457302 PRRT2Q7Z6L0 340 aaPredicted RBP14.67□□□□□ -0.06
C9orf139-201ENST00000457302 STK11IPQ8N1F8 1099 aa14.67□□□□□ -0.06
C9orf139-201ENST00000457302 FAM43AQ8N2R8 423 aa14.67□□□□□ -0.06
C9orf139-201ENST00000457302 RUFY2Q8WXA3 655 aa14.67□□□□□ -0.06
C9orf139-201ENST00000457302 DYNLL2Q96FJ2 89 aa14.67□□□□□ -0.06
C9orf139-201ENST00000457302 FEZ1Q99689 392 aa14.67□□□□□ -0.06
C9orf139-201ENST00000457302 PNMA3Q9UL41 463 aa14.67□□□□□ -0.06
C9orf139-201ENST00000457302 CYP2D7A0A087X1C5 515 aa14.66□□□□□ -0.06
C9orf139-201ENST00000457302 OSBPP22059 807 aa14.66□□□□□ -0.06
C9orf139-201ENST00000457302 USP14P54578 494 aa14.66□□□□□ -0.06
C9orf139-201ENST00000457302 BACE1P56817 501 aa14.66□□□□□ -0.06
C9orf139-201ENST00000457302 CRHR2Q13324 411 aa14.66□□□□□ -0.06
C9orf139-201ENST00000457302 KIF22Q14807 665 aa14.66□□□□□ -0.06
C9orf139-201ENST00000457302 NOM1Q5C9Z4 860 aaKnown RBP14.66□□□□□ -0.06
C9orf139-201ENST00000457302 COL13A1Q5TAT6 717 aaPredicted RBP14.66□□□□□ -0.06
C9orf139-201ENST00000457302 CCDC129Q6ZRS4 1044 aa14.66□□□□□ -0.06
C9orf139-201ENST00000457302 TMEM179Q6ZVK1 233 aa14.66□□□□□ -0.06
C9orf139-201ENST00000457302 C16orf86Q6ZW13 317 aa14.66□□□□□ -0.06
C9orf139-201ENST00000457302 CCDC84Q86UT8 332 aaPredicted RBP14.66□□□□□ -0.06
C9orf139-201ENST00000457302 PROCA1Q8NCQ7 364 aaPredicted RBP14.66□□□□□ -0.06
C9orf139-201ENST00000457302 FAM227BQ96M60 508 aa14.66□□□□□ -0.06
C9orf139-201ENST00000457302 PARK7Q99497 189 aaKnown RBP14.66□□□□□ -0.06
C9orf139-201ENST00000457302 SIPA1L1O43166 1804 aa14.66□□□□□ -0.06
C9orf139-201ENST00000457302 HMGCS2P54868 508 aa14.65□□□□□ -0.06
C9orf139-201ENST00000457302 SP3Q02447 781 aa14.65□□□□□ -0.06
C9orf139-201ENST00000457302 USP17L2Q6R6M4 530 aa14.65□□□□□ -0.06
C9orf139-201ENST00000457302 TNS4Q8IZW8 715 aa14.65□□□□□ -0.06
C9orf139-201ENST00000457302 ZNF296Q8WUU4 475 aaPredicted RBP14.65□□□□□ -0.06
C9orf139-201ENST00000457302 ERO1AQ96HE7 468 aa14.65□□□□□ -0.06
C9orf139-201ENST00000457302 SH2D4AQ9H788 454 aa14.65□□□□□ -0.06
C9orf139-201ENST00000457302 ARHGEF10LQ9HCE6 1279 aa14.65□□□□□ -0.06
C9orf139-201ENST00000457302 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.65□□□□□ -0.06
C9orf139-201ENST00000457302 SLC45A1Q9Y2W3 748 aa14.65□□□□□ -0.06
C9orf139-201ENST00000457302 LAMB1P07942 1786 aa14.65□□□□□ -0.06
C9orf139-201ENST00000457302 CCDC171Q6TFL3 1326 aa14.65□□□□□ -0.06
C9orf139-201ENST00000457302 A0A0D9SFI3 127 aa14.64□□□□□ -0.07
C9orf139-201ENST00000457302 TLR2O60603 784 aa14.64□□□□□ -0.07
C9orf139-201ENST00000457302 MTMR2Q13614 643 aa14.64□□□□□ -0.07
C9orf139-201ENST00000457302 SEPT2Q15019 361 aa14.64□□□□□ -0.07
C9orf139-201ENST00000457302 ALX1Q15699 326 aa14.64□□□□□ -0.07
C9orf139-201ENST00000457302 SH3D19Q5HYK7 790 aa14.64□□□□□ -0.07
C9orf139-201ENST00000457302 SLC44A5Q8NCS7 719 aa14.64□□□□□ -0.07
C9orf139-201ENST00000457302 SMCR8Q8TEV9 937 aaPredicted RBP14.64□□□□□ -0.07
C9orf139-201ENST00000457302 PPP4R2Q9NY27 417 aa14.64□□□□□ -0.07
C9orf139-201ENST00000457302 AGTPBP1Q9UPW5 1226 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms