RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 MIGA1Q8NAN2 632 aa10.72□□□□□ -0.69
PKP4-207ENST00000457109 EAF2Q96CJ1 260 aaPredicted RBP10.72□□□□□ -0.69
PKP4-207ENST00000457109 HMX1Q9NP08 348 aaPredicted RBP10.72□□□□□ -0.69
PKP4-207ENST00000457109 PIH1D3Q9NQM4 214 aaKnown RBP10.72□□□□□ -0.69
PKP4-207ENST00000457109 DBNLQ9UJU6 430 aaKnown RBP10.72□□□□□ -0.69
PKP4-207ENST00000457109 COL2A1P02458 1487 aaPredicted RBP10.72□□□□□ -0.69
PKP4-207ENST00000457109 GDF11O95390 407 aa10.71□□□□□ -0.69
PKP4-207ENST00000457109 HMGCRP04035 888 aa10.71□□□□□ -0.69
PKP4-207ENST00000457109 MAPK4P31152 587 aa10.71□□□□□ -0.69
PKP4-207ENST00000457109 HOXA7P31268 230 aaPredicted RBP10.71□□□□□ -0.69
PKP4-207ENST00000457109 USP14P54578 494 aa10.71□□□□□ -0.69
PKP4-207ENST00000457109 DYNLL1P63167 89 aaKnown RBP10.71□□□□□ -0.69
PKP4-207ENST00000457109 CCNA1P78396 465 aa10.71□□□□□ -0.69
PKP4-207ENST00000457109 RAB3GAP1Q15042 981 aa10.71□□□□□ -0.69
PKP4-207ENST00000457109 CERKLQ49MI3 558 aaPredicted RBP10.71□□□□□ -0.69
PKP4-207ENST00000457109 CEP85Q6P2H3 762 aa10.71□□□□□ -0.69
PKP4-207ENST00000457109 CHRDL2Q6WN34 429 aa10.71□□□□□ -0.69
PKP4-207ENST00000457109 NECAB2Q7Z6G3 386 aa10.71□□□□□ -0.69
PKP4-207ENST00000457109 RPAP2Q8IXW5 612 aaPredicted RBP10.71□□□□□ -0.69
PKP4-207ENST00000457109 P2RX7Q99572 595 aaKnown RBP10.71□□□□□ -0.69
PKP4-207ENST00000457109 NUDT12Q9BQG2 462 aa10.71□□□□□ -0.69
PKP4-207ENST00000457109 SERPINB13Q9UIV8 391 aa10.71□□□□□ -0.69
PKP4-207ENST00000457109 EXOC6BQ9Y2D4 811 aa10.71□□□□□ -0.69
PKP4-207ENST00000457109 RPTORQ8N122 1335 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 MAGEB6P1A0A0J9YX57 407 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 USP17L15C9J2P7 530 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 USP17L13C9JLJ4 530 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 USP17L11C9JVI0 530 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 USP17L18D6R9N7 530 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 USP17L22D6RA61 530 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 USP17L17D6RBQ6 530 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 USP17L19D6RCP7 530 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 USP17L20D6RJB6 530 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 APBB1O00213 710 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 GH2P01242 217 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 HERVK_113P62684 666 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 USP17L24Q0WX57 530 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 ABCB5Q2M3G0 1257 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 ADGRA1Q86SQ6 560 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 METTL16Q86W50 562 aaKnown RBP10.7□□□□□ -0.7
PKP4-207ENST00000457109 AMOTL1Q8IY63 956 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 SOCS4Q8WXH5 440 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 SHISA4Q96DD7 197 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 KIF1BPQ96EK5 621 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 PAGR1Q9BTK6 254 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 CRNKL1Q9BZJ0 848 aaKnown RBP10.7□□□□□ -0.7
PKP4-207ENST00000457109 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.7□□□□□ -0.74e-7■■□□□ 13.5
PKP4-207ENST00000457109 TLR7Q9NYK1 1049 aaKnown RBP10.7□□□□□ -0.7
PKP4-207ENST00000457109 MORF4L1Q9UBU8 362 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 ZBTB21Q9ULJ3 1066 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 DDX19BQ9UMR2 479 aa10.7□□□□□ -0.7
PKP4-207ENST00000457109 MPHOSPH10O00566 681 aaKnown RBP10.69□□□□□ -0.7
PKP4-207ENST00000457109 RAB11FIP3O75154 756 aa10.69□□□□□ -0.7
PKP4-207ENST00000457109 RLBP1P12271 317 aa10.69□□□□□ -0.7
PKP4-207ENST00000457109 CYP2B6P20813 491 aa10.69□□□□□ -0.7
PKP4-207ENST00000457109 RRP1BQ14684 758 aaKnown RBP10.69□□□□□ -0.7
PKP4-207ENST00000457109 ZYXQ15942 572 aaKnown RBP10.69□□□□□ -0.7
PKP4-207ENST00000457109 SLC9C2Q5TAH2 1124 aa10.69□□□□□ -0.7
PKP4-207ENST00000457109 WDR78Q5VTH9 848 aa10.69□□□□□ -0.7
PKP4-207ENST00000457109 ANKLE1Q8NAG6 615 aa10.69□□□□□ -0.7
PKP4-207ENST00000457109 RHPN1Q8TCX5 695 aa10.69□□□□□ -0.7
PKP4-207ENST00000457109 PANK1Q8TE04 598 aa10.69□□□□□ -0.7
PKP4-207ENST00000457109 DDRGK1Q96HY6 314 aa10.69□□□□□ -0.7
PKP4-207ENST00000457109 IL1RAPL2Q9NP60 686 aa10.69□□□□□ -0.7
PKP4-207ENST00000457109 IVNS1ABPQ9Y6Y0 642 aa10.69□□□□□ -0.7
PKP4-207ENST00000457109 LAMB1P07942 1786 aa10.69□□□□□ -0.7
PKP4-207ENST00000457109 ZBED9Q6R2W3 1325 aa10.68□□□□□ -0.7
PKP4-207ENST00000457109 ZKSCAN1P17029 563 aaPredicted RBP10.68□□□□□ -0.7
PKP4-207ENST00000457109 RGS2P41220 211 aa10.68□□□□□ -0.7
PKP4-207ENST00000457109 PLEKHH3Q7Z736 793 aa10.68□□□□□ -0.7
PKP4-207ENST00000457109 PAWRQ96IZ0 340 aaKnown RBP10.68□□□□□ -0.7
PKP4-207ENST00000457109 DNAJC2Q99543 621 aaKnown RBP10.68□□□□□ -0.7
PKP4-207ENST00000457109 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.68□□□□□ -0.7
PKP4-207ENST00000457109 NBPF3Q9H094 633 aa10.68□□□□□ -0.7
PKP4-207ENST00000457109 EHD4Q9H223 541 aa10.68□□□□□ -0.7
PKP4-207ENST00000457109 PAK6Q9NQU5 681 aaPredicted RBP10.68□□□□□ -0.7
PKP4-207ENST00000457109 MCM9Q9NXL9 1143 aa10.68□□□□□ -0.7
PKP4-207ENST00000457109 GJD2Q9UKL4 321 aa10.68□□□□□ -0.7
PKP4-207ENST00000457109 RABGAP1Q9Y3P9 1069 aa10.68□□□□□ -0.7
PKP4-207ENST00000457109 MYH2Q9UKX2 1941 aa10.68□□□□□ -0.7
PKP4-207ENST00000457109 MYH13Q9UKX3 1938 aa10.68□□□□□ -0.7
PKP4-207ENST00000457109 XRCC5P13010 732 aaKnown RBP10.67□□□□□ -0.7
PKP4-207ENST00000457109 FXR1P51114 621 aaKnown RBP eCLIP10.67□□□□□ -0.7
PKP4-207ENST00000457109 ERVK-9P63128 1117 aa10.67□□□□□ -0.7
PKP4-207ENST00000457109 ERVK-24P63145 666 aa10.67□□□□□ -0.7
PKP4-207ENST00000457109 TATDN1Q6P1N9 297 aa10.67□□□□□ -0.7
PKP4-207ENST00000457109 CRISPLD2Q9H0B8 497 aa10.67□□□□□ -0.7
PKP4-207ENST00000457109 ANTXR1Q9H6X2 564 aa10.67□□□□□ -0.7
PKP4-207ENST00000457109 EMILIN3Q9NT22 766 aa10.67□□□□□ -0.7
PKP4-207ENST00000457109 RBPJLQ9UBG7 517 aa10.67□□□□□ -0.7
PKP4-207ENST00000457109 NDUFB9Q9Y6M9 179 aa10.67□□□□□ -0.7
PKP4-207ENST00000457109 KIAA0100Q14667 2235 aaKnown RBP10.67□□□□□ -0.7
PKP4-207ENST00000457109 GOLIM4O00461 696 aa10.66□□□□□ -0.7
PKP4-207ENST00000457109 MFSD14CQ5VZR4 134 aa10.66□□□□□ -0.7
PKP4-207ENST00000457109 ZSCAN25Q6NSZ9 544 aa10.66□□□□□ -0.7
PKP4-207ENST00000457109 UBE2Q1Q7Z7E8 422 aa10.66□□□□□ -0.7
PKP4-207ENST00000457109 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.66□□□□□ -0.7
PKP4-207ENST00000457109 EDC3Q96F86 508 aaKnown RBP10.66□□□□□ -0.7
PKP4-207ENST00000457109 KIAA1683Q9H0B3 1180 aa10.66□□□□□ -0.7
PKP4-207ENST00000457109 DNAJC18Q9H819 358 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms