RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 RAPGEFL1Q9UHV5 662 aa8.71□□□□□ -1.02
COMMD3-204ENST00000456711 WASHC2AQ641Q2 1341 aa8.71□□□□□ -1.02
COMMD3-204ENST00000456711 CANXP27824 592 aaKnown RBP8.7□□□□□ -1.02
COMMD3-204ENST00000456711 ALDH1B1P30837 517 aa8.7□□□□□ -1.02
COMMD3-204ENST00000456711 RFC5P40937 340 aa8.7□□□□□ -1.02
COMMD3-204ENST00000456711 TM4SF4P48230 202 aa8.7□□□□□ -1.02
COMMD3-204ENST00000456711 EIF5P55010 431 aaKnown RBP8.7□□□□□ -1.02
COMMD3-204ENST00000456711 KRT26Q7Z3Y9 468 aa8.7□□□□□ -1.02
COMMD3-204ENST00000456711 GGNBP2Q9H3C7 697 aa8.7□□□□□ -1.02
COMMD3-204ENST00000456711 MARK1Q9P0L2 795 aa8.7□□□□□ -1.02
COMMD3-204ENST00000456711 PTPN22Q9Y2R2 807 aa8.7□□□□□ -1.02
COMMD3-204ENST00000456711 NPC1L1Q9UHC9 1359 aa8.7□□□□□ -1.02
COMMD3-204ENST00000456711 MRC1P22897 1456 aa8.7□□□□□ -1.02
COMMD3-204ENST00000456711 LAMA3Q16787 3333 aa8.69□□□□□ -1.02
COMMD3-204ENST00000456711 ST20-MTHFSA0A0A6YYL1 179 aa8.69□□□□□ -1.02
COMMD3-204ENST00000456711 FYB1O15117 783 aa8.69□□□□□ -1.02
COMMD3-204ENST00000456711 MTHFSP49914 203 aa8.69□□□□□ -1.02
COMMD3-204ENST00000456711 CXCL9Q07325 125 aa8.69□□□□□ -1.02
COMMD3-204ENST00000456711 SHISA2Q6UWI4 295 aa8.69□□□□□ -1.02
COMMD3-204ENST00000456711 DPF3Q92784 378 aa8.69□□□□□ -1.02
COMMD3-204ENST00000456711 SLC24A3Q9HC58 644 aa8.69□□□□□ -1.02
COMMD3-204ENST00000456711 RNF112Q9ULX5 631 aa8.69□□□□□ -1.02
COMMD3-204ENST00000456711 POLR2AP24928 1970 aaKnown RBP8.69□□□□□ -1.02
COMMD3-204ENST00000456711 EFSO43281 561 aa8.68□□□□□ -1.02
COMMD3-204ENST00000456711 MCCD1P59942 119 aaPredicted RBP8.68□□□□□ -1.02
COMMD3-204ENST00000456711 NRG1Q02297 640 aaPredicted RBP8.68□□□□□ -1.02
COMMD3-204ENST00000456711 NR1H3Q13133 447 aa8.68□□□□□ -1.02
COMMD3-204ENST00000456711 Q7L0L9 218 aa8.68□□□□□ -1.02
COMMD3-204ENST00000456711 SSBP4Q9BWG4 385 aaPredicted RBP8.68□□□□□ -1.02
COMMD3-204ENST00000456711 BCL2L13Q9BXK5 485 aa8.68□□□□□ -1.02
COMMD3-204ENST00000456711 R3HDMLQ9H3Y0 253 aa8.68□□□□□ -1.02
COMMD3-204ENST00000456711 MTMR10Q9NXD2 777 aa8.68□□□□□ -1.02
COMMD3-204ENST00000456711 ADARB2-AS1A8MUL3 147 aa8.67□□□□□ -1.02
COMMD3-204ENST00000456711 ADM5C9JUS6 153 aa8.67□□□□□ -1.02
COMMD3-204ENST00000456711 TSGA10IPQ3SY00 556 aa8.67□□□□□ -1.02
COMMD3-204ENST00000456711 ZNF530Q6P9A1 599 aaPredicted RBP8.67□□□□□ -1.02
COMMD3-204ENST00000456711 VSIG10Q8N0Z9 540 aa8.67□□□□□ -1.02
COMMD3-204ENST00000456711 ZNF333Q96JL9 665 aa8.67□□□□□ -1.02
COMMD3-204ENST00000456711 SNX27Q96L92 541 aa8.67□□□□□ -1.02
COMMD3-204ENST00000456711 PUS7Q96PZ0 661 aaKnown RBP8.67□□□□□ -1.02
COMMD3-204ENST00000456711 CNOT7Q9UIV1 285 aaKnown RBP8.67□□□□□ -1.02
COMMD3-204ENST00000456711 ZNRF3Q9ULT6 936 aa8.67□□□□□ -1.02
COMMD3-204ENST00000456711 TBC1D2BQ9UPU7 963 aa8.67□□□□□ -1.02
COMMD3-204ENST00000456711 ROCK2O75116 1388 aaKnown RBP8.66□□□□□ -1.02
COMMD3-204ENST00000456711 SHTN1A0MZ66 631 aa8.66□□□□□ -1.02
COMMD3-204ENST00000456711 H7C1D1 291 aa8.66□□□□□ -1.02
COMMD3-204ENST00000456711 PPIP5K2O43314 1243 aa8.66□□□□□ -1.02
COMMD3-204ENST00000456711 SIN3BO75182 1162 aa8.66□□□□□ -1.02
COMMD3-204ENST00000456711 SLC4A8Q2Y0W8 1093 aa8.66□□□□□ -1.02
COMMD3-204ENST00000456711 PLEKHO1Q53GL0 409 aaPredicted RBP8.66□□□□□ -1.02
COMMD3-204ENST00000456711 NBPF5PQ86XG9 351 aaPredicted RBP8.66□□□□□ -1.02
COMMD3-204ENST00000456711 ZNF295-AS1Q8N0V1 137 aa8.66□□□□□ -1.02
COMMD3-204ENST00000456711 DCPSQ96C86 337 aaKnown RBP8.66□□□□□ -1.02
COMMD3-204ENST00000456711 RAB3GAP2Q9H2M9 1393 aa8.65□□□□□ -1.02
COMMD3-204ENST00000456711 PPM1GO15355 546 aaPredicted RBP8.65□□□□□ -1.02
COMMD3-204ENST00000456711 FKBP1BP68106 108 aa8.65□□□□□ -1.02
COMMD3-204ENST00000456711 FZD5Q13467 585 aa8.65□□□□□ -1.02
COMMD3-204ENST00000456711 AOC3Q16853 763 aa8.65□□□□□ -1.02
COMMD3-204ENST00000456711 VPS33BQ9H267 617 aa8.65□□□□□ -1.02
COMMD3-204ENST00000456711 KIF20BQ96Q89 1820 aa8.64□□□□□ -1.03
COMMD3-204ENST00000456711 WTIPA6NIX2 430 aaPredicted RBP8.64□□□□□ -1.03
COMMD3-204ENST00000456711 CAMTA2O94983 1202 aa8.64□□□□□ -1.03
COMMD3-204ENST00000456711 SREBF2Q12772 1141 aa8.64□□□□□ -1.03
COMMD3-204ENST00000456711 TNIP1Q15025 636 aa8.64□□□□□ -1.03
COMMD3-204ENST00000456711 AMOTQ4VCS5 1084 aa8.64□□□□□ -1.03
COMMD3-204ENST00000456711 C1orf141Q5JVX7 400 aa8.64□□□□□ -1.03
COMMD3-204ENST00000456711 C20orf204Q6ZNR8 217 aa8.64□□□□□ -1.03
COMMD3-204ENST00000456711 LENG1Q96BZ8 264 aaPredicted RBP8.64□□□□□ -1.03
COMMD3-204ENST00000456711 ERO1AQ96HE7 468 aa8.64□□□□□ -1.03
COMMD3-204ENST00000456711 NIFKQ9BYG3 293 aaKnown RBP8.64□□□□□ -1.03
COMMD3-204ENST00000456711 NR2E3Q9Y5X4 410 aa8.64□□□□□ -1.03
COMMD3-204ENST00000456711 ZNF609O15014 1411 aa8.63□□□□□ -1.03
COMMD3-204ENST00000456711 A0A0A0MRY4 1105 aa8.63□□□□□ -1.03
COMMD3-204ENST00000456711 ZBTB7BO15156 539 aaPredicted RBP8.63□□□□□ -1.03
COMMD3-204ENST00000456711 STARD3NLO95772 234 aa8.63□□□□□ -1.03
COMMD3-204ENST00000456711 SLC39A6Q13433 755 aa8.63□□□□□ -1.03
COMMD3-204ENST00000456711 TPTE2Q6XPS3 522 aa8.63□□□□□ -1.03
COMMD3-204ENST00000456711 CDCA5Q96FF9 252 aa8.63□□□□□ -1.03
COMMD3-204ENST00000456711 SLC30A3Q99726 388 aa8.63□□□□□ -1.03
COMMD3-204ENST00000456711 ZNF330Q9Y3S2 320 aaPredicted RBP8.63□□□□□ -1.03
COMMD3-204ENST00000456711 KDM3BQ7LBC6 1761 aa8.63□□□□□ -1.03
COMMD3-204ENST00000456711 GPR37L1O60883 481 aa8.62□□□□□ -1.03
COMMD3-204ENST00000456711 RAD17O75943 681 aa8.62□□□□□ -1.03
COMMD3-204ENST00000456711 EGFRP00533 1210 aa8.62□□□□□ -1.03
COMMD3-204ENST00000456711 IL6STP40189 918 aaPredicted RBP8.62□□□□□ -1.03
COMMD3-204ENST00000456711 LAMC2Q13753 1193 aa8.62□□□□□ -1.03
COMMD3-204ENST00000456711 SLC9C1Q4G0N8 1177 aa8.62□□□□□ -1.03
COMMD3-204ENST00000456711 TBC1D10BQ4KMP7 808 aaPredicted RBP8.62□□□□□ -1.03
COMMD3-204ENST00000456711 SAMD5Q5TGI4 173 aa8.62□□□□□ -1.03
COMMD3-204ENST00000456711 TNFRSF25Q93038 417 aa8.62□□□□□ -1.03
COMMD3-204ENST00000456711 HTATIP2Q9BUP3 242 aa8.62□□□□□ -1.03
COMMD3-204ENST00000456711 FAM117AQ9C073 453 aa8.62□□□□□ -1.03
COMMD3-204ENST00000456711 EFCC1Q9HA90 598 aa8.62□□□□□ -1.03
COMMD3-204ENST00000456711 PCMTD2Q9NV79 361 aa8.62□□□□□ -1.03
COMMD3-204ENST00000456711 CEP126Q9P2H0 1117 aa8.62□□□□□ -1.03
COMMD3-204ENST00000456711 RPTORQ8N122 1335 aa8.61□□□□□ -1.03
COMMD3-204ENST00000456711 CRY2Q49AN0 593 aa8.61□□□□□ -1.03
COMMD3-204ENST00000456711 CD99L2Q8TCZ2 262 aa8.61□□□□□ -1.03
COMMD3-204ENST00000456711 DPF2Q92785 391 aa8.61□□□□□ -1.03
COMMD3-204ENST00000456711 SLC52A2Q9HAB3 445 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms