RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 CCL15Q16663 113 aa10.19□□□□□ -0.78
SP140-207ENST00000456542 SLC4A8Q2Y0W8 1093 aa10.19□□□□□ -0.78
SP140-207ENST00000456542 SBK1Q52WX2 424 aa10.19□□□□□ -0.78
SP140-207ENST00000456542 NOM1Q5C9Z4 860 aaKnown RBP10.19□□□□□ -0.78
SP140-207ENST00000456542 TTC22Q5TAA0 569 aa10.19□□□□□ -0.78
SP140-207ENST00000456542 C12orf60Q5U649 245 aa10.19□□□□□ -0.78
SP140-207ENST00000456542 ERICH6BQ5W0A0 696 aa10.19□□□□□ -0.78
SP140-207ENST00000456542 OTUD7BQ6GQQ9 843 aa10.19□□□□□ -0.78
SP140-207ENST00000456542 BRI3BPQ8WY22 251 aa10.19□□□□□ -0.78
SP140-207ENST00000456542 RILPL2Q969X0 211 aa10.19□□□□□ -0.78
SP140-207ENST00000456542 SEC62Q99442 399 aaKnown RBP10.19□□□□□ -0.78
SP140-207ENST00000456542 ZCCHC17Q9NP64 241 aaKnown RBP10.19□□□□□ -0.78
SP140-207ENST00000456542 PRDM10Q9NQV6 1147 aa10.19□□□□□ -0.78
SP140-207ENST00000456542 SWAP70Q9UH65 585 aa10.19□□□□□ -0.78
SP140-207ENST00000456542 ZHX2Q9Y6X8 837 aa10.19□□□□□ -0.78
SP140-207ENST00000456542 ROBO3Q96MS0 1386 aa10.18□□□□□ -0.78
SP140-207ENST00000456542 USP17L5A8MUK1 530 aa10.18□□□□□ -0.78
SP140-207ENST00000456542 PATL2C9JE40 543 aaKnown RBP10.18□□□□□ -0.78
SP140-207ENST00000456542 HIP1O00291 1037 aa10.18□□□□□ -0.78
SP140-207ENST00000456542 SHMT1P34896 483 aa10.18□□□□□ -0.78
SP140-207ENST00000456542 LBX1P52954 281 aa10.18□□□□□ -0.78
SP140-207ENST00000456542 CTR9Q6PD62 1173 aa10.18□□□□□ -0.78
SP140-207ENST00000456542 PTPN18Q99952 460 aa10.18□□□□□ -0.78
SP140-207ENST00000456542 NACAP1Q9BZK3 213 aa10.18□□□□□ -0.78
SP140-207ENST00000456542 AS3MTQ9HBK9 375 aa10.18□□□□□ -0.78
SP140-207ENST00000456542 EPB41L4AQ9HCS5 686 aaPredicted RBP10.18□□□□□ -0.78
SP140-207ENST00000456542 ZBTB21Q9ULJ3 1066 aa10.18□□□□□ -0.78
SP140-207ENST00000456542 AFG3L2Q9Y4W6 797 aa10.18□□□□□ -0.78
SP140-207ENST00000456542 GREB1LQ9C091 1923 aaPredicted RBP10.17□□□□□ -0.78
SP140-207ENST00000456542 A0A0D9SFI3 127 aa10.17□□□□□ -0.78
SP140-207ENST00000456542 A0A0G2JLL6 359 aaPredicted RBP10.17□□□□□ -0.78
SP140-207ENST00000456542 GDF11O95390 407 aa10.17□□□□□ -0.78
SP140-207ENST00000456542 CYP2D6P10635 497 aa10.17□□□□□ -0.78
SP140-207ENST00000456542 GSPT1P15170 499 aaKnown RBP10.17□□□□□ -0.78
SP140-207ENST00000456542 SDSP20132 328 aa10.17□□□□□ -0.78
SP140-207ENST00000456542 NMIQ13287 307 aaPredicted RBP10.17□□□□□ -0.78
SP140-207ENST00000456542 CERKLQ49MI3 558 aaPredicted RBP10.17□□□□□ -0.78
SP140-207ENST00000456542 MCMDC2Q4G0Z9 681 aa10.17□□□□□ -0.78
SP140-207ENST00000456542 C16orf86Q6ZW13 317 aa10.17□□□□□ -0.78
SP140-207ENST00000456542 FASTKD5Q7L8L6 764 aaKnown RBP10.17□□□□□ -0.78
SP140-207ENST00000456542 PRRT2Q7Z6L0 340 aaPredicted RBP10.17□□□□□ -0.78
SP140-207ENST00000456542 ANKRD23Q86SG2 305 aa10.17□□□□□ -0.78
SP140-207ENST00000456542 IFNL3Q8IZI9 196 aa10.17□□□□□ -0.78
SP140-207ENST00000456542 ZNF280CQ8ND82 737 aa10.17□□□□□ -0.78
SP140-207ENST00000456542 CCDC136Q96JN2 1154 aa10.17□□□□□ -0.78
SP140-207ENST00000456542 FAM227BQ96M60 508 aa10.17□□□□□ -0.78
SP140-207ENST00000456542 WDR18Q9BV38 432 aa10.17□□□□□ -0.78
SP140-207ENST00000456542 TSKSQ9UJT2 592 aa10.17□□□□□ -0.78
SP140-207ENST00000456542 ZMYM6O95789 1325 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 BTBD19C9JJ37 291 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 APPP05067 770 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 TDO2P48775 406 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 MFAP1P55081 439 aaKnown RBP10.16□□□□□ -0.78
SP140-207ENST00000456542 JAG1P78504 1218 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 EVX2Q03828 476 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 MOGSQ13724 837 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 ABCB5Q2M3G0 1257 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 SH3D19Q5HYK7 790 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 FAM43AQ8N2R8 423 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 PROCA1Q8NCQ7 364 aaPredicted RBP10.16□□□□□ -0.78
SP140-207ENST00000456542 DYNLL2Q96FJ2 89 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 CCDC17Q96LX7 622 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 NAPBQ9H115 298 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 CABP5Q9NP86 173 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 DIAPH3Q9NSV4 1193 aa10.16□□□□□ -0.78
SP140-207ENST00000456542 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.16□□□□□ -0.78
SP140-207ENST00000456542 CCDC171Q6TFL3 1326 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 LAMA4Q16363 1823 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 CYP2D7A0A087X1C5 515 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 TRIM75PA6NK02 468 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 C19orf81C9J6K1 198 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 FOXP2O15409 715 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 TBC1D8O95759 1140 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 GH2P01242 217 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 CDK8P49336 464 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 SPP2Q13103 211 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 TAF1CQ15572 869 aaPredicted RBP10.15□□□□□ -0.78
SP140-207ENST00000456542 CCDC129Q6ZRS4 1044 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 TMEM179Q6ZVK1 233 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 CCDC84Q86UT8 332 aaPredicted RBP10.15□□□□□ -0.78
SP140-207ENST00000456542 SLC44A5Q8NCS7 719 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 ZNF287Q9HBT7 754 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 ZFYVE28Q9HCC9 887 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 SLC45A1Q9Y2W3 748 aa10.15□□□□□ -0.78
SP140-207ENST00000456542 RAD50Q92878 1312 aa10.14□□□□□ -0.79
SP140-207ENST00000456542 MINDY4BA8MYZ0 360 aa10.14□□□□□ -0.79
SP140-207ENST00000456542 USP17L10C9JJH3 530 aa10.14□□□□□ -0.79
SP140-207ENST00000456542 SMIM22K7EJ46 135 aa10.14□□□□□ -0.79
SP140-207ENST00000456542 GPR25O00155 361 aa10.14□□□□□ -0.79
SP140-207ENST00000456542 BACE1P56817 501 aa10.14□□□□□ -0.79
SP140-207ENST00000456542 CRHR2Q13324 411 aa10.14□□□□□ -0.79
SP140-207ENST00000456542 ALX1Q15699 326 aa10.14□□□□□ -0.79
SP140-207ENST00000456542 SHROOM1Q2M3G4 852 aaPredicted RBP10.14□□□□□ -0.79
SP140-207ENST00000456542 VPS53Q5VIR6 699 aa10.14□□□□□ -0.79
SP140-207ENST00000456542 GPAT2Q6NUI2 795 aa10.14□□□□□ -0.79
SP140-207ENST00000456542 CWC27Q6UX04 472 aaKnown RBP10.14□□□□□ -0.79
SP140-207ENST00000456542 ZNF589Q86UQ0 364 aaPredicted RBP10.14□□□□□ -0.79
SP140-207ENST00000456542 AGTPBP1Q9UPW5 1226 aa10.14□□□□□ -0.79
SP140-207ENST00000456542 PDHXO00330 501 aa10.13□□□□□ -0.79
SP140-207ENST00000456542 TLR2O60603 784 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms