RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 DHX36Q9H2U1 1008 aaKnown RBP14.65□□□□□ -0.06
LMCD1-206ENST00000456506 GPR108Q9NPR9 543 aa14.65□□□□□ -0.06
LMCD1-206ENST00000456506 AATFQ9NY61 560 aaKnown RBP eCLIP14.65□□□□□ -0.06
LMCD1-206ENST00000456506 TAOK2Q9UL54 1235 aa14.65□□□□□ -0.06
LMCD1-206ENST00000456506 OGDHLQ9ULD0 1010 aa14.65□□□□□ -0.06
LMCD1-206ENST00000456506 BCAR3O75815 825 aa14.64□□□□□ -0.07
LMCD1-206ENST00000456506 TNNI3KQ59H18 835 aa14.64□□□□□ -0.07
LMCD1-206ENST00000456506 ATF7IPQ6VMQ6 1270 aa14.64□□□□□ -0.07
LMCD1-206ENST00000456506 ZNF512BQ96KM6 892 aaPredicted RBP14.64□□□□□ -0.07
LMCD1-206ENST00000456506 P2RX7Q99572 595 aaKnown RBP14.64□□□□□ -0.07
LMCD1-206ENST00000456506 DBNDD2Q9BQY9 259 aa14.64□□□□□ -0.07
LMCD1-206ENST00000456506 AS3MTQ9HBK9 375 aa14.64□□□□□ -0.07
LMCD1-206ENST00000456506 SNRKQ9NRH2 765 aa14.64□□□□□ -0.07
LMCD1-206ENST00000456506 LRP2BPQ9P2M1 347 aa14.64□□□□□ -0.07
LMCD1-206ENST00000456506 RBPJLQ9UBG7 517 aa14.64□□□□□ -0.07
LMCD1-206ENST00000456506 FPGT-TNNI3KV9GXZ4 949 aa14.64□□□□□ -0.07
LMCD1-206ENST00000456506 BAZ2AQ9UIF9 1905 aaKnown RBP14.64□□□□□ -0.07
LMCD1-206ENST00000456506 PFASO15067 1338 aa14.64□□□□□ -0.07
LMCD1-206ENST00000456506 PLXNA1Q9UIW2 1896 aa14.63□□□□□ -0.07
LMCD1-206ENST00000456506 LAMA2P24043 3122 aaKnown RBP14.63□□□□□ -0.07
LMCD1-206ENST00000456506 ASNSP08243 561 aa14.63□□□□□ -0.07
LMCD1-206ENST00000456506 XRCC5P13010 732 aaKnown RBP14.63□□□□□ -0.07
LMCD1-206ENST00000456506 HERVK_113P62684 666 aa14.63□□□□□ -0.07
LMCD1-206ENST00000456506 Q3C1V9 767 aa14.63□□□□□ -0.07
LMCD1-206ENST00000456506 GORABQ5T7V8 394 aa14.63□□□□□ -0.07
LMCD1-206ENST00000456506 NAA16Q6N069 864 aaPredicted RBP14.63□□□□□ -0.07
LMCD1-206ENST00000456506 POTEDQ86YR6 584 aa14.63□□□□□ -0.07
LMCD1-206ENST00000456506 MAPKAPK5Q8IW41 473 aa14.63□□□□□ -0.07
LMCD1-206ENST00000456506 SSH3Q8TE77 659 aa14.63□□□□□ -0.07
LMCD1-206ENST00000456506 TGFBRAP1Q8WUH2 860 aa14.63□□□□□ -0.07
LMCD1-206ENST00000456506 HMX1Q9NP08 348 aaPredicted RBP14.63□□□□□ -0.07
LMCD1-206ENST00000456506 UNC80Q8N2C7 3258 aa14.63□□□□□ -0.07
LMCD1-206ENST00000456506 C19orf81C9J6K1 198 aa14.62□□□□□ -0.07
LMCD1-206ENST00000456506 COL6A1P12109 1028 aa14.62□□□□□ -0.07
LMCD1-206ENST00000456506 G3BP1Q13283 466 aaKnown RBP eCLIP14.62□□□□□ -0.07
LMCD1-206ENST00000456506 FOXP4Q8IVH2 680 aaPredicted RBP14.62□□□□□ -0.07
LMCD1-206ENST00000456506 C7orf61Q8IZ16 206 aa14.62□□□□□ -0.07
LMCD1-206ENST00000456506 PORCNQ9H237 461 aa14.62□□□□□ -0.07
LMCD1-206ENST00000456506 PIH1D3Q9NQM4 214 aaKnown RBP14.62□□□□□ -0.07
LMCD1-206ENST00000456506 EMILIN3Q9NT22 766 aa14.62□□□□□ -0.07
LMCD1-206ENST00000456506 PALD1Q9ULE6 856 aa14.62□□□□□ -0.07
LMCD1-206ENST00000456506 ZBTB21Q9ULJ3 1066 aa14.62□□□□□ -0.07
LMCD1-206ENST00000456506 IGSF3O75054 1194 aa14.61□□□□□ -0.07
LMCD1-206ENST00000456506 GDF11O95390 407 aa14.61□□□□□ -0.07
LMCD1-206ENST00000456506 BAG3O95817 575 aa14.61□□□□□ -0.07
LMCD1-206ENST00000456506 PRKAR2AP13861 404 aaKnown RBP14.61□□□□□ -0.07
LMCD1-206ENST00000456506 CYP2B6P20813 491 aa14.61□□□□□ -0.07
LMCD1-206ENST00000456506 MORN1Q5T089 497 aa14.61□□□□□ -0.07
LMCD1-206ENST00000456506 LHX8Q68G74 356 aa14.61□□□□□ -0.07
LMCD1-206ENST00000456506 TMEM57Q8N5G2 664 aa14.61□□□□□ -0.07
LMCD1-206ENST00000456506 NBPF3Q9H094 633 aa14.61□□□□□ -0.07
LMCD1-206ENST00000456506 GINM1Q9NU53 330 aa14.61□□□□□ -0.07
LMCD1-206ENST00000456506 DBNLQ9UJU6 430 aaKnown RBP14.61□□□□□ -0.07
LMCD1-206ENST00000456506 USP17L10C9JJH3 530 aa14.6□□□□□ -0.07
LMCD1-206ENST00000456506 CNMDO75829 334 aa14.6□□□□□ -0.07
LMCD1-206ENST00000456506 PLCG2P16885 1265 aa14.6□□□□□ -0.07
LMCD1-206ENST00000456506 ZAP70P43403 619 aa14.6□□□□□ -0.07
LMCD1-206ENST00000456506 ERVK-9P63128 1117 aa14.6□□□□□ -0.07
LMCD1-206ENST00000456506 ERVK-24P63145 666 aa14.6□□□□□ -0.07
LMCD1-206ENST00000456506 DYNLL1P63167 89 aaKnown RBP14.6□□□□□ -0.07
LMCD1-206ENST00000456506 IRX3P78415 501 aaPredicted RBP14.6□□□□□ -0.07
LMCD1-206ENST00000456506 CACNB2Q08289 660 aaPredicted RBP14.6□□□□□ -0.07
LMCD1-206ENST00000456506 TATDN1Q6P1N9 297 aa14.6□□□□□ -0.07
LMCD1-206ENST00000456506 GPRC5AQ8NFJ5 357 aa14.6□□□□□ -0.07
LMCD1-206ENST00000456506 CLUAP1Q96AJ1 413 aa14.6□□□□□ -0.07
LMCD1-206ENST00000456506 C11orf49Q9H6J7 331 aa14.6□□□□□ -0.07
LMCD1-206ENST00000456506 TLR7Q9NYK1 1049 aaKnown RBP14.6□□□□□ -0.07
LMCD1-206ENST00000456506 ZMYND8Q9ULU4 1186 aaPredicted RBP14.6□□□□□ -0.07
LMCD1-206ENST00000456506 CCER2I3L3R5 266 aa14.59□□□□□ -0.07
LMCD1-206ENST00000456506 IPO8O15397 1037 aaKnown RBP14.59□□□□□ -0.07
LMCD1-206ENST00000456506 IGHA2P01877 340 aa14.59□□□□□ -0.07
LMCD1-206ENST00000456506 ATP8B2P98198 1209 aa14.59□□□□□ -0.07
LMCD1-206ENST00000456506 CCL14Q16627 93 aa14.59□□□□□ -0.07
LMCD1-206ENST00000456506 TTC39AQ5SRH9 613 aa14.59□□□□□ -0.07
LMCD1-206ENST00000456506 GPR153Q6NV75 609 aa14.59□□□□□ -0.07
LMCD1-206ENST00000456506 SOCS4Q8WXH5 440 aa14.59□□□□□ -0.07
LMCD1-206ENST00000456506 C12orf42Q96LP6 360 aa14.59□□□□□ -0.07
LMCD1-206ENST00000456506 NUDT12Q9BQG2 462 aa14.59□□□□□ -0.07
LMCD1-206ENST00000456506 TMOD4Q9NZQ9 345 aa14.59□□□□□ -0.07
LMCD1-206ENST00000456506 NOP58Q9Y2X3 529 aaKnown RBP14.59□□□□□ -0.07
LMCD1-206ENST00000456506 EYSQ5T1H1 3165 aa14.58□□□□□ -0.08
LMCD1-206ENST00000456506 SYN1P17600 705 aa14.58□□□□□ -0.08
LMCD1-206ENST00000456506 CCND3P30281 292 aaPredicted RBP14.58□□□□□ -0.08
LMCD1-206ENST00000456506 MAPK4P31152 587 aa14.58□□□□□ -0.08
LMCD1-206ENST00000456506 MAGEA10P43363 369 aaPredicted RBP14.58□□□□□ -0.08
LMCD1-206ENST00000456506 LRIT3Q3SXY7 679 aa14.58□□□□□ -0.08
LMCD1-206ENST00000456506 GPR142Q7Z601 462 aa14.58□□□□□ -0.08
LMCD1-206ENST00000456506 FRAT1Q92837 279 aaPredicted RBP14.58□□□□□ -0.08
LMCD1-206ENST00000456506 EAF2Q96CJ1 260 aaPredicted RBP14.58□□□□□ -0.08
LMCD1-206ENST00000456506 NOL10Q9BSC4 688 aaKnown RBP14.58□□□□□ -0.08
LMCD1-206ENST00000456506 SAP30BPQ9UHR5 308 aaKnown RBP14.58□□□□□ -0.08
LMCD1-206ENST00000456506 GREB1LQ9C091 1923 aaPredicted RBP14.58□□□□□ -0.08
LMCD1-206ENST00000456506 A0A0C4DFX4 3053 aa14.57□□□□□ -0.08
LMCD1-206ENST00000456506 GH2P01242 217 aa14.57□□□□□ -0.08
LMCD1-206ENST00000456506 CCDC158Q5M9N0 1113 aa14.57□□□□□ -0.08
LMCD1-206ENST00000456506 EHD4Q9H223 541 aa14.57□□□□□ -0.08
LMCD1-206ENST00000456506 FLRT1Q9NZU1 646 aa14.57□□□□□ -0.08
LMCD1-206ENST00000456506 SMCHD1A6NHR9 2005 aa14.57□□□□□ -0.08
LMCD1-206ENST00000456506 ZKSCAN1P17029 563 aaPredicted RBP14.56□□□□□ -0.08
LMCD1-206ENST00000456506 USP17L2Q6R6M4 530 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms