RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 BTBD18B2RXH4 712 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 EIF4A1P60842 406 aaKnown RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 BIRC2Q13490 618 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 WDR93Q6P2C0 686 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 VPS37DQ86XT2 251 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 SLF1Q9BQI6 1058 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 AGPAT5Q9NUQ2 364 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 TPX2Q9ULW0 747 aaKnown RBP5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 MAPK8IP1Q9UQF2 711 aa5.18□□□□□ -1.58
DEPDC1-202ENST00000456315 SH2B2O14492 632 aaPredicted RBP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 SPTLC2O15270 562 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 ATP6V1AP38606 617 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 GSDMDP57764 484 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 CREG2Q8IUH2 290 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 PPM1EQ8WY54 764 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 CALR3Q96L12 384 aaKnown RBP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 LRRC1Q9BTT6 524 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 ZMYND8Q9ULU4 1186 aaPredicted RBP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 PDCP20941 246 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 SATB1Q01826 763 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 MYL5Q02045 173 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 MIGA2Q7L4E1 593 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 CNTROBQ8N137 903 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 RBM33Q96EV2 1170 aaKnown RBP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 EPSTI1Q96J88 318 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 WASLO00401 505 aaPredicted RBP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 EIF3JO75822 258 aaKnown RBP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 RPSAP08865 295 aaKnown RBP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 HSPD1P10809 573 aaKnown RBP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 ELF1P32519 619 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 KLK7P49862 253 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 HDLBPQ00341 1268 aaKnown RBP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 CUL4BQ13620 913 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 SPECC1LQ69YQ0 1117 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 RASGRP2Q7LDG7 609 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 CCDC13Q8IYE1 715 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 FUKQ8N0W3 1084 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 CCDC82Q8N4S0 544 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 ZSCAN31Q96LW9 406 aaPredicted RBP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 ARHGEF10LQ9HCE6 1279 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 SLC12A6Q9UHW9 1150 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 MCM8Q9UJA3 840 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 CAPN7Q9Y6W3 813 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 AOX1Q06278 1338 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 ZFYVE9O95405 1425 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 A0A1W2PQ27 194 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 A0A1W2PQ64 194 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 A0A1W2PQD8 194 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 E7EWF7 191 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 AP1G2O75843 785 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 ERLIN2O94905 339 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 SSBP05455 408 aaKnown RBP eCLIP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 GLI1P08151 1106 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 CARSP49589 748 aaKnown RBP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 NLRP12P59046 1061 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 CCNI2Q6ZMN8 369 aaPredicted RBP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 ERC1Q8IUD2 1116 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 ANKRD13CQ8N6S4 541 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 CNOT8Q9UFF9 292 aaKnown RBP5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 RGPD1P0DJD0 1748 aa5.17□□□□□ -1.58
DEPDC1-202ENST00000456315 hCG_1642624A0A1W2PR95 340 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 TTC26A0AVF1 554 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 ENO4A6NNW6 628 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 HTATSF1O43719 755 aaKnown RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 USP4Q13107 963 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 SLC39A14Q15043 492 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 RNPC3Q96LT9 517 aaKnown RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 A0A1B0GTH6 734 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 WTIPA6NIX2 430 aaPredicted RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 APPP05067 770 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 ZKSCAN1P17029 563 aaPredicted RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 FECHP22830 423 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 TMOD1P28289 359 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 WLSQ5T9L3 541 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 NAA16Q6N069 864 aaPredicted RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 MSL3Q8N5Y2 521 aaKnown RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 ANKRD20A12PQ8NF67 263 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 OR2W6PQ8NHA6 318 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 OXER1Q8TDS5 423 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 GOLPH3Q9H4A6 298 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 ANGEL1Q9UNK9 670 aaKnown RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 IGSF1Q8N6C5 1336 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 PIK3C2BO00750 1634 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 FAM237AA0A1B0GTK4 181 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 ERCC3P19447 782 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 CMA1P23946 247 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 FLT3P36888 993 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 TRAPPC11Q7Z392 1133 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 DNAAF4Q8WXU2 420 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 GOLGA1Q92805 767 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 TSPYL1Q9H0U9 437 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 ALDH8A1Q9H2A2 487 aaPredicted RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 NR2E1Q9Y466 385 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 RPS6KL1Q9Y6S9 549 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 OVOS2A0A0J9YW53 1432 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 OVOS2Q6IE36 1432 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 ACEP12821 1306 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 NBEAQ8NFP9 2946 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 PXDNQ92626 1479 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 SERPINC1P01008 464 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms