RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-208	ENST00000456173	hCG_2014768	A0A024R1R8	64 aa		13.72	□□□□□ -0.21
NEDD4L-208	ENST00000456173	FAM170A	A1A519	330 aa		13.72	□□□□□ -0.21
NEDD4L-208	ENST00000456173	CFAP61	Q8NHU2	1237 aa		13.72	□□□□□ -0.21
NEDD4L-208	ENST00000456173	ZMAT2	Q96NC0	199 aa	Known RBP	13.72	□□□□□ -0.21
NEDD4L-208	ENST00000456173	PCDHA7	Q9UN72	937 aa		13.72	□□□□□ -0.21
NEDD4L-208	ENST00000456173	BUB1	O43683	1085 aa		13.72	□□□□□ -0.21
NEDD4L-208	ENST00000456173	CTNND1	O60716	968 aa	Known RBP	13.72	□□□□□ -0.21
NEDD4L-208	ENST00000456173	APBA1	Q02410	837 aa		13.72	□□□□□ -0.21
NEDD4L-208	ENST00000456173	SLC4A8	Q2Y0W8	1093 aa		13.72	□□□□□ -0.21
NEDD4L-208	ENST00000456173	C2CD5	Q86YS7	1000 aa		13.72	□□□□□ -0.21
NEDD4L-208	ENST00000456173	CCDC65	Q8IXS2	484 aa		13.72	□□□□□ -0.21
NEDD4L-208	ENST00000456173	KLHDC4	Q8TBB5	520 aa		13.72	□□□□□ -0.21
NEDD4L-208	ENST00000456173	SERTAD1	Q9UHV2	236 aa		13.72	□□□□□ -0.21
NEDD4L-208	ENST00000456173	KRT15	P19012	456 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	NR1D1	P20393	614 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	VPS41	P49754	854 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	PHACTR3	Q96KR7	559 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	LRRC27	Q9C0I9	530 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	PDHA1	P08559	390 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	CASP14	P31944	242 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	C2orf54	Q08AI8	447 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	IFIT5	Q13325	482 aa	Known RBP	13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	ANKRD13C	Q8N6S4	541 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	THOC1	Q96FV9	657 aa	Known RBP	13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	NUP58	Q9BVL2	599 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	TAT	P17735	454 aa	Predicted RBP	13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	CARD14	Q9BXL6	1004 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	KCNF1	Q9H3M0	494 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	YY1AP1	Q9H869	796 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	KLC4	Q9NSK0	619 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	INTS9	Q9NV88	658 aa	Known RBP	13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	CHPF2	Q9P2E5	772 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	ASIC3	Q9UHC3	531 aa		13.71	□□□□□ -0.21
NEDD4L-208	ENST00000456173	BLM	P54132	1417 aa	Predicted RBP	13.71	□□□□□ -0.22
NEDD4L-208	ENST00000456173	SUN1	O94901	812 aa		13.71	□□□□□ -0.22
NEDD4L-208	ENST00000456173	EPHB4	P54760	987 aa		13.71	□□□□□ -0.22
NEDD4L-208	ENST00000456173	NUDT16	Q96DE0	195 aa	Known RBP	13.71	□□□□□ -0.22
NEDD4L-208	ENST00000456173	POLK	Q9UBT6	870 aa		13.71	□□□□□ -0.22
NEDD4L-208	ENST00000456173	TSKS	Q9UJT2	592 aa		13.71	□□□□□ -0.22
NEDD4L-208	ENST00000456173	SOWAHD	A6NJG2	315 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	KRT2	P35908	639 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	MRPS25	P82663	173 aa	Known RBP	13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	WAPL	Q7Z5K2	1190 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	NELFB	Q8WX92	580 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	PAG1	Q9NWQ8	432 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	RGS12	O14924	1447 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	ARHGAP42	A6NI28	874 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	GGCX	P38435	758 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	RILPL1	Q5EBL4	403 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	TSNARE1	Q96NA8	513 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	DDX23	Q9BUQ8	820 aa	Known RBP	13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	BLZF1	Q9H2G9	400 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	NUTM2E	B1AL46	878 aa	Predicted RBP	13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	TRAF5	O00463	557 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	KCNK3	O14649	394 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	G2E3	Q7L622	706 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	ACRBP	Q8NEB7	543 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	SREK1	Q8WXA9	508 aa	Known RBP	13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	NUF2	Q9BZD4	464 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	EPB41L5	Q9HCM4	733 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	RBM6	P78332	1123 aa	Known RBP	13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	ZBTB17	Q13105	803 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	KCNV2	Q8TDN2	545 aa		13.7	□□□□□ -0.22
NEDD4L-208	ENST00000456173	PNMA6E	A0A0J9YXQ4	647 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	TCP1	P17987	556 aa	Known RBP	13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	PDE4D	Q08499	809 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	CUL4A	Q13619	759 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	MYSM1	Q5VVJ2	828 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	RRAGA	Q7L523	313 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	PARP9	Q8IXQ6	854 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	NSD2	O96028	1365 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	TSPY2	A6NKD2	308 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	KRT12	Q99456	494 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	CCDC61	Q9Y6R9	512 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	PEX26	Q7Z412	305 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	KRT23	Q9C075	422 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	SPOP	O43791	374 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	TBCA	O75347	108 aa	Known RBP	13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	SLC7A5	Q01650	507 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	PTH1R	Q03431	593 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	BICD1	Q96G01	975 aa		13.69	□□□□□ -0.22
NEDD4L-208	ENST00000456173	IFIT1B	Q5T764	474 aa	Known RBP	13.68	□□□□□ -0.22
NEDD4L-208	ENST00000456173	DTHD1	Q6ZMT9	781 aa		13.68	□□□□□ -0.22
NEDD4L-208	ENST00000456173	CCDC105	Q8IYK2	499 aa		13.68	□□□□□ -0.22
NEDD4L-208	ENST00000456173	KAT14	Q9H8E8	782 aa		13.68	□□□□□ -0.22
NEDD4L-208	ENST00000456173	NLRC4	Q9NPP4	1024 aa		13.68	□□□□□ -0.22
NEDD4L-208	ENST00000456173	KRIT1	O00522	736 aa		13.68	□□□□□ -0.22
NEDD4L-208	ENST00000456173	DIS3L2	Q8IYB7	885 aa	Known RBP	13.68	□□□□□ -0.22
NEDD4L-208	ENST00000456173	FBXO41	Q8TF61	875 aa		13.68	□□□□□ -0.22
NEDD4L-208	ENST00000456173	HAUS1	Q96CS2	278 aa		13.68	□□□□□ -0.22
NEDD4L-208	ENST00000456173	SYNC	Q9H7C4	482 aa		13.68	□□□□□ -0.22
NEDD4L-208	ENST00000456173	HEXIM1	O94992	359 aa	Known RBP	13.68	□□□□□ -0.22
NEDD4L-208	ENST00000456173	RBL2	Q08999	1139 aa		13.68	□□□□□ -0.22
NEDD4L-208	ENST00000456173	TMTC2	Q8N394	836 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms