RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 USP50Q70EL3 339 aaPredicted RBP11.53□□□□□ -0.56
CHCHD4P3-201ENST00000455954 KBTBD3Q8NAB2 608 aa11.53□□□□□ -0.56
CHCHD4P3-201ENST00000455954 TLR7Q9NYK1 1049 aaKnown RBP11.53□□□□□ -0.56
CHCHD4P3-201ENST00000455954 TAF6LQ9Y6J9 622 aa11.53□□□□□ -0.56
CHCHD4P3-201ENST00000455954 FPGT-TNNI3KV9GXZ4 949 aa11.53□□□□□ -0.56
CHCHD4P3-201ENST00000455954 ECM29Q5VYK3 1845 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 FAM237AA0A1B0GTK4 181 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 EFCAB8A8MWE9 144 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 PSMD14O00487 310 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ZSCAN12O43309 604 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 DHX16O60231 1041 aaKnown RBP11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 CTDNEP1O95476 244 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 PNMA6AP0CW24 399 aaPredicted RBP11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ME1P48163 572 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 CLCN6P51797 869 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 FGD1P98174 961 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ARID5BQ14865 1188 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 CCDC57Q2TAC2 916 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 LRRFIP1Q32MZ4 808 aaKnown RBP11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 EPHA10Q5JZY3 1008 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 JAKMIP3Q5VZ66 844 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ELOA2Q8IYF1 753 aaPredicted RBP11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TXLNBQ8N3L3 684 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 MSL3Q8N5Y2 521 aaKnown RBP11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 DNAJC5GQ8N7S2 189 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TCEANC2Q96MN5 208 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 UBXN6Q9BZV1 441 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ADARB2Q9NS39 739 aaKnown RBP11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ZNF446Q9NWS9 450 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 LEMD3Q9Y2U8 911 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 FHOD1Q9Y613 1164 aa11.52□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TADA3O75528 432 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ITGBL1O95965 494 aaPredicted RBP11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 RPS12P25398 132 aaKnown RBP11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 RFX5P48382 616 aaPredicted RBP11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TUBB4BP68371 445 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 HTRA3P83110 453 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 MAP1SQ66K74 1059 aaPredicted RBP11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ARMCX5Q6P1M9 558 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TMC6Q7Z403 805 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 PODNQ7Z5L7 613 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 LINC00301Q8NCQ3 95 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 UBXN4Q92575 508 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 DPF2Q92785 391 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 DNAJC2Q99543 621 aaKnown RBP11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 SDF4Q9BRK5 362 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 XPO4Q9C0E2 1151 aaKnown RBP11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TMX1Q9H3N1 280 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 KCNQ5Q9NR82 932 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ORC3Q9UBD5 711 aaPredicted RBP11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 CNOT7Q9UIV1 285 aaKnown RBP11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 DBNLQ9UJU6 430 aaKnown RBP11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 PCDHA7Q9UN72 937 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ADAMTSL1Q8N6G6 1762 aa11.51□□□□□ -0.57
CHCHD4P3-201ENST00000455954 WTIPA6NIX2 430 aaPredicted RBP11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 H7C1D1 291 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 SLC3A2P08195 630 aaKnown RBP11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 VIL1P09327 827 aaKnown RBP11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 CMA1P23946 247 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 CHRNDQ07001 517 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 GPS2Q13227 327 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 COL9A3Q14050 684 aaPredicted RBP11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 STK38Q15208 465 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TAF7LQ5H9L4 462 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ZMYM1Q5SVZ6 1142 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 SYT10Q6XYQ8 523 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 STOX1Q6ZVD7 989 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 MNS1Q8NEH6 495 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 DDX11Q96FC9 970 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TRMT1Q9NXH9 659 aaKnown RBP11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 PSD3Q9NYI0 1048 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 IFNKQ9P0W0 207 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TUBE1Q9UJT0 475 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ZBTB12Q9Y330 459 aaPredicted RBP11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ZNF804BA4D1E1 1349 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 NEDD4P46934 1319 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 PASKQ96RG2 1323 aa11.5□□□□□ -0.57
CHCHD4P3-201ENST00000455954 SMC2O95347 1197 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 PDIA3P30101 505 aaKnown RBP11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 PLA2G4AP47712 749 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 FANCCQ00597 558 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TUBB2AQ13885 445 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 NCAPHQ15003 741 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ERCC6LQ2NKX8 1250 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ARHGAP29Q52LW3 1261 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 LDHAL6AQ6ZMR3 332 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 MICALL2Q8IY33 904 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 GPR161Q8N6U8 529 aaKnown RBP11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 JMYQ8N9B5 988 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ZNF594Q96JF6 807 aaPredicted RBP11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TUBB2BQ9BVA1 445 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 COA1Q9GZY4 146 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 CREBZFQ9NS37 354 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 TMEM51Q9NW97 253 aa11.49□□□□□ -0.57
CHCHD4P3-201ENST00000455954 E7EWF7 191 aa11.48□□□□□ -0.57
CHCHD4P3-201ENST00000455954 POTEB2H3BUK9 544 aa11.48□□□□□ -0.57
CHCHD4P3-201ENST00000455954 SPTLC2O15270 562 aa11.48□□□□□ -0.57
CHCHD4P3-201ENST00000455954 ARHGAP6O43182 974 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms