RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 METTL16Q86W50 562 aaKnown RBP31.45■■■□□ 2.63
NEK6-211ENST00000454453 GPRC5AQ8NFJ5 357 aa31.45■■■□□ 2.63
NEK6-211ENST00000454453 MTMR10Q9NXD2 777 aa31.45■■■□□ 2.63
NEK6-211ENST00000454453 CT47B1P0C2W7 299 aaPredicted RBP31.44■■■□□ 2.62
NEK6-211ENST00000454453 CCL14Q16627 93 aa31.44■■■□□ 2.62
NEK6-211ENST00000454453 LHX8Q68G74 356 aa31.44■■■□□ 2.62
NEK6-211ENST00000454453 ADGRA1Q86SQ6 560 aa31.44■■■□□ 2.62
NEK6-211ENST00000454453 PORCNQ9H237 461 aa31.44■■■□□ 2.62
NEK6-211ENST00000454453 AATFQ9NY61 560 aaKnown RBP eCLIP31.44■■■□□ 2.62
NEK6-211ENST00000454453 ASNSP08243 561 aa31.43■■■□□ 2.62
NEK6-211ENST00000454453 GNAI3P08754 354 aa31.43■■■□□ 2.62
NEK6-211ENST00000454453 GORABQ5T7V8 394 aa31.43■■■□□ 2.62
NEK6-211ENST00000454453 SOCS4Q8WXH5 440 aa31.43■■■□□ 2.62
NEK6-211ENST00000454453 DHX36Q9H2U1 1008 aaKnown RBP31.43■■■□□ 2.62
NEK6-211ENST00000454453 TMOD4Q9NZQ9 345 aa31.43■■■□□ 2.62
NEK6-211ENST00000454453 LRP2BPQ9P2M1 347 aa31.43■■■□□ 2.62
NEK6-211ENST00000454453 STXBP5LQ9Y2K9 1186 aa31.43■■■□□ 2.62
NEK6-211ENST00000454453 MAST2Q6P0Q8 1798 aa31.43■■■□□ 2.62
NEK6-211ENST00000454453 FOCADQ5VW36 1801 aa31.42■■■□□ 2.62
NEK6-211ENST00000454453 CCND3P30281 292 aaPredicted RBP31.42■■■□□ 2.62
NEK6-211ENST00000454453 MAPKAPK5Q8IW41 473 aa31.42■■■□□ 2.62
NEK6-211ENST00000454453 TGFBRAP1Q8WUH2 860 aa31.42■■■□□ 2.62
NEK6-211ENST00000454453 UBE2OQ9C0C9 1292 aaKnown RBP31.42■■■□□ 2.62
NEK6-211ENST00000454453 PNMA6EA0A0J9YXQ4 647 aa31.41■■■□□ 2.62
NEK6-211ENST00000454453 GDF11O95390 407 aa31.41■■■□□ 2.62
NEK6-211ENST00000454453 RARSP54136 660 aaKnown RBP31.41■■■□□ 2.62
NEK6-211ENST00000454453 LRRC26Q2I0M4 334 aa31.41■■■□□ 2.62
NEK6-211ENST00000454453 MORN1Q5T089 497 aa31.41■■■□□ 2.62
NEK6-211ENST00000454453 FLT1P17948 1338 aa31.41■■■□□ 2.62
NEK6-211ENST00000454453 DNAH12Q6ZR08 3092 aa31.4■■■□□ 2.62
NEK6-211ENST00000454453 C19orf81C9J6K1 198 aa31.4■■■□□ 2.62
NEK6-211ENST00000454453 ZKSCAN1P17029 563 aaPredicted RBP31.4■■■□□ 2.62
NEK6-211ENST00000454453 ERVK-9P63128 1117 aa31.4■■■□□ 2.62
NEK6-211ENST00000454453 ERVK-24P63145 666 aa31.4■■■□□ 2.62
NEK6-211ENST00000454453 GPR142Q7Z601 462 aa31.4■■■□□ 2.62
NEK6-211ENST00000454453 SNRKQ9NRH2 765 aa31.4■■■□□ 2.62
NEK6-211ENST00000454453 EMILIN3Q9NT22 766 aa31.4■■■□□ 2.62
NEK6-211ENST00000454453 USP17L10C9JJH3 530 aa31.39■■■□□ 2.62
NEK6-211ENST00000454453 MAPK4P31152 587 aa31.39■■■□□ 2.62
NEK6-211ENST00000454453 PPP4CP60510 307 aa31.39■■■□□ 2.62
NEK6-211ENST00000454453 NAA16Q6N069 864 aaPredicted RBP31.39■■■□□ 2.62
NEK6-211ENST00000454453 PALD1Q9ULE6 856 aa31.39■■■□□ 2.62
NEK6-211ENST00000454453 LAMA2P24043 3122 aaKnown RBP31.39■■■□□ 2.62
NEK6-211ENST00000454453 UQCRFS1P1P0C7P4 283 aa31.38■■■□□ 2.61
NEK6-211ENST00000454453 ARHGAP45Q92619 1136 aa31.38■■■□□ 2.61
NEK6-211ENST00000454453 ZBTB21Q9ULJ3 1066 aa31.38■■■□□ 2.61
NEK6-211ENST00000454453 TNNQ9UQP3 1299 aa31.38■■■□□ 2.61
NEK6-211ENST00000454453 FOXP4Q8IVH2 680 aaPredicted RBP31.37■■■□□ 2.61
NEK6-211ENST00000454453 TRMT44Q8IYL2 757 aaKnown RBP31.37■■■□□ 2.61
NEK6-211ENST00000454453 PAGR1Q9BTK6 254 aa31.37■■■□□ 2.61
NEK6-211ENST00000454453 FRMPD3Q5JV73 1810 aa31.37■■■□□ 2.61
NEK6-211ENST00000454453 MYO5AQ9Y4I1 1855 aaKnown RBP31.37■■■□□ 2.61
NEK6-211ENST00000454453 CUL9Q8IWT3 2517 aa31.37■■■□□ 2.61
NEK6-211ENST00000454453 BAG3O95817 575 aa31.36■■■□□ 2.61
NEK6-211ENST00000454453 PDE3AQ14432 1141 aa31.36■■■□□ 2.61
NEK6-211ENST00000454453 NOL10Q9BSC4 688 aaKnown RBP31.36■■■□□ 2.61
NEK6-211ENST00000454453 CNMDO75829 334 aa31.35■■■□□ 2.61
NEK6-211ENST00000454453 CYP2E1P05181 493 aaPredicted RBP31.35■■■□□ 2.61
NEK6-211ENST00000454453 RGS2P41220 211 aa31.35■■■□□ 2.61
NEK6-211ENST00000454453 MDM2Q00987 491 aaPredicted RBP31.35■■■□□ 2.61
NEK6-211ENST00000454453 PLEKHH3Q7Z736 793 aa31.35■■■□□ 2.61
NEK6-211ENST00000454453 PLCG2P16885 1265 aa31.34■■■□□ 2.61
NEK6-211ENST00000454453 G3BP1Q13283 466 aaKnown RBP eCLIP31.34■■■□□ 2.61
NEK6-211ENST00000454453 CRACR2BQ8N4Y2 399 aaPredicted RBP31.34■■■□□ 2.61
NEK6-211ENST00000454453 APBA2Q99767 749 aa31.34■■■□□ 2.61
NEK6-211ENST00000454453 GINM1Q9NU53 330 aa31.34■■■□□ 2.61
NEK6-211ENST00000454453 FLRT1Q9NZU1 646 aa31.34■■■□□ 2.61
NEK6-211ENST00000454453 SAP30BPQ9UHR5 308 aaKnown RBP31.34■■■□□ 2.61
NEK6-211ENST00000454453 DBNDD2Q9BQY9 259 aa31.33■■■□□ 2.61
NEK6-211ENST00000454453 GNAI2P04899 355 aa31.31■■■□□ 2.6
NEK6-211ENST00000454453 DYNLL1P63167 89 aaKnown RBP31.31■■■□□ 2.6
NEK6-211ENST00000454453 NDUFB9Q9Y6M9 179 aa31.31■■■□□ 2.6
NEK6-211ENST00000454453 TRIM27P14373 513 aa31.3■■■□□ 2.6
NEK6-211ENST00000454453 MAP2K5Q13163 448 aa31.3■■■□□ 2.6
NEK6-211ENST00000454453 TNNI3KQ59H18 835 aa31.3■■■□□ 2.6
NEK6-211ENST00000454453 TTC39AQ5SRH9 613 aa31.3■■■□□ 2.6
NEK6-211ENST00000454453 USP17L2Q6R6M4 530 aa31.3■■■□□ 2.6
NEK6-211ENST00000454453 GTF3C2Q8WUA4 911 aaPredicted RBP31.3■■■□□ 2.6
NEK6-211ENST00000454453 TRIM34Q9BYJ4 488 aa31.3■■■□□ 2.6
NEK6-211ENST00000454453 PIH1D3Q9NQM4 214 aaKnown RBP31.3■■■□□ 2.6
NEK6-211ENST00000454453 FPGT-TNNI3KV9GXZ4 949 aa31.3■■■□□ 2.6
NEK6-211ENST00000454453 GH2P01242 217 aa31.29■■■□□ 2.6
NEK6-211ENST00000454453 CCAR1Q8IX12 1150 aaKnown RBP31.29■■■□□ 2.6
NEK6-211ENST00000454453 C12orf42Q96LP6 360 aa31.29■■■□□ 2.6
NEK6-211ENST00000454453 EYSQ5T1H1 3165 aa31.28■■■□□ 2.6
NEK6-211ENST00000454453 POTEB2H3BUK9 544 aa31.28■■■□□ 2.6
NEK6-211ENST00000454453 ZAP70P43403 619 aa31.28■■■□□ 2.6
NEK6-211ENST00000454453 ZYXQ15942 572 aaKnown RBP31.28■■■□□ 2.6
NEK6-211ENST00000454453 EDC3Q96F86 508 aaKnown RBP31.28■■■□□ 2.6
NEK6-211ENST00000454453 GUCD1Q96NT3 240 aa31.28■■■□□ 2.6
NEK6-211ENST00000454453 GPR108Q9NPR9 543 aa31.28■■■□□ 2.6
NEK6-211ENST00000454453 RABGAP1Q9Y3P9 1069 aa31.28■■■□□ 2.6
NEK6-211ENST00000454453 TATDN1Q6P1N9 297 aa31.27■■■□□ 2.6
NEK6-211ENST00000454453 POLA2Q14181 598 aa31.26■■■□□ 2.59
NEK6-211ENST00000454453 COL25A1Q9BXS0 654 aaPredicted RBP31.26■■■□□ 2.59
NEK6-211ENST00000454453 SENP6Q9GZR1 1112 aaPredicted RBP31.26■■■□□ 2.59
NEK6-211ENST00000454453 HLA-DOAP06340 250 aa31.25■■■□□ 2.59
NEK6-211ENST00000454453 CCDC158Q5M9N0 1113 aa31.25■■■□□ 2.59
NEK6-211ENST00000454453 CATSPERGQ6ZRH7 1159 aa31.25■■■□□ 2.59
NEK6-211ENST00000454453 BTBD7Q9P203 1132 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms