RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 FCGRTP55899 365 aa19.92■□□□□ 0.78
NCKIPSD-208ENST00000454134 EVX2Q03828 476 aa19.92■□□□□ 0.78
NCKIPSD-208ENST00000454134 SH3D19Q5HYK7 790 aa19.92■□□□□ 0.78
NCKIPSD-208ENST00000454134 NBPF11Q86T75 865 aa19.92■□□□□ 0.78
NCKIPSD-208ENST00000454134 LCORLQ8N3X6 602 aa19.92■□□□□ 0.78
NCKIPSD-208ENST00000454134 CRNKL1Q9BZJ0 848 aaKnown RBP19.92■□□□□ 0.78
NCKIPSD-208ENST00000454134 DCTPP1Q9H773 170 aa19.92■□□□□ 0.78
NCKIPSD-208ENST00000454134 SERPINB13Q9UIV8 391 aa19.92■□□□□ 0.78
NCKIPSD-208ENST00000454134 GH2P01242 217 aa19.91■□□□□ 0.78
NCKIPSD-208ENST00000454134 HOXD10P28358 340 aa19.91■□□□□ 0.78
NCKIPSD-208ENST00000454134 ADD2P35612 726 aa19.91■□□□□ 0.78
NCKIPSD-208ENST00000454134 PRMT2P55345 433 aa19.91■□□□□ 0.78
NCKIPSD-208ENST00000454134 RRP1P56182 461 aaKnown RBP19.91■□□□□ 0.78
NCKIPSD-208ENST00000454134 TTC6Q86TZ1 520 aa19.91■□□□□ 0.78
NCKIPSD-208ENST00000454134 ANKRD13CQ8N6S4 541 aa19.91■□□□□ 0.78
NCKIPSD-208ENST00000454134 SDR42E1Q8WUS8 393 aa19.91■□□□□ 0.78
NCKIPSD-208ENST00000454134 EHD4Q9H223 541 aa19.91■□□□□ 0.78
NCKIPSD-208ENST00000454134 ARMT1Q9H993 441 aa19.91■□□□□ 0.78
NCKIPSD-208ENST00000454134 PNMA3Q9UL41 463 aa19.91■□□□□ 0.78
NCKIPSD-208ENST00000454134 PCDHB15Q9Y5E8 787 aa19.91■□□□□ 0.78
NCKIPSD-208ENST00000454134 MYPNQ86TC9 1320 aa19.91■□□□□ 0.78
NCKIPSD-208ENST00000454134 NAV1Q8NEY1 1877 aa19.9■□□□□ 0.78
NCKIPSD-208ENST00000454134 POLR3DP05423 398 aaPredicted RBP19.9■□□□□ 0.78
NCKIPSD-208ENST00000454134 EN2P19622 333 aaPredicted RBP19.9■□□□□ 0.78
NCKIPSD-208ENST00000454134 BACE1P56817 501 aa19.9■□□□□ 0.78
NCKIPSD-208ENST00000454134 PRKCZQ05513 592 aa19.9■□□□□ 0.78
NCKIPSD-208ENST00000454134 TATDN1Q6P1N9 297 aa19.9■□□□□ 0.78
NCKIPSD-208ENST00000454134 RAET1EQ8TD07 263 aa19.9■□□□□ 0.78
NCKIPSD-208ENST00000454134 ASCC2Q9H1I8 757 aaPredicted RBP19.9■□□□□ 0.78
NCKIPSD-208ENST00000454134 MCM9Q9NXL9 1143 aa19.9■□□□□ 0.78
NCKIPSD-208ENST00000454134 GABRQQ9UN88 632 aa19.9■□□□□ 0.78
NCKIPSD-208ENST00000454134 DDX60LQ5H9U9 1706 aaKnown RBP19.9■□□□□ 0.78
NCKIPSD-208ENST00000454134 MGAMO43451 1857 aa19.9■□□□□ 0.78
NCKIPSD-208ENST00000454134 MBD4O95243 580 aa19.89■□□□□ 0.77
NCKIPSD-208ENST00000454134 TSHZ3Q63HK5 1081 aa19.89■□□□□ 0.77
NCKIPSD-208ENST00000454134 TMEM106CQ9BVX2 250 aa19.89■□□□□ 0.77
NCKIPSD-208ENST00000454134 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.89■□□□□ 0.77
NCKIPSD-208ENST00000454134 ECHDC1Q9NTX5 307 aa19.89■□□□□ 0.77
NCKIPSD-208ENST00000454134 GINM1Q9NU53 330 aa19.89■□□□□ 0.77
NCKIPSD-208ENST00000454134 TMOD4Q9NZQ9 345 aa19.89■□□□□ 0.77
NCKIPSD-208ENST00000454134 USP17L10C9JJH3 530 aa19.88■□□□□ 0.77
NCKIPSD-208ENST00000454134 PRKAB2O43741 272 aa19.88■□□□□ 0.77
NCKIPSD-208ENST00000454134 CYP2D6P10635 497 aa19.88■□□□□ 0.77
NCKIPSD-208ENST00000454134 SHMT1P34896 483 aa19.88■□□□□ 0.77
NCKIPSD-208ENST00000454134 PABPC4Q13310 644 aaKnown RBP eCLIP19.88■□□□□ 0.77
NCKIPSD-208ENST00000454134 CERKLQ49MI3 558 aaPredicted RBP19.88■□□□□ 0.77
NCKIPSD-208ENST00000454134 DCP1AQ9NPI6 582 aaPredicted RBP19.88■□□□□ 0.77
NCKIPSD-208ENST00000454134 RBBP6Q7Z6E9 1792 aaKnown RBP19.88■□□□□ 0.77
NCKIPSD-208ENST00000454134 KIAA0100Q14667 2235 aaKnown RBP19.87■□□□□ 0.77
NCKIPSD-208ENST00000454134 C19orf81C9J6K1 198 aa19.87■□□□□ 0.77
NCKIPSD-208ENST00000454134 RAB3GAP1Q15042 981 aa19.87■□□□□ 0.77
NCKIPSD-208ENST00000454134 TNPO2O14787 897 aaKnown RBP19.86■□□□□ 0.77
NCKIPSD-208ENST00000454134 GRK4P32298 578 aa19.86■□□□□ 0.77
NCKIPSD-208ENST00000454134 GCLCP48506 637 aaPredicted RBP19.86■□□□□ 0.77
NCKIPSD-208ENST00000454134 IRX3P78415 501 aaPredicted RBP19.86■□□□□ 0.77
NCKIPSD-208ENST00000454134 GABPAQ06546 454 aa19.86■□□□□ 0.77
NCKIPSD-208ENST00000454134 ZYXQ15942 572 aaKnown RBP19.86■□□□□ 0.77
NCKIPSD-208ENST00000454134 FAM110CQ1W6H9 321 aa19.86■□□□□ 0.77
NCKIPSD-208ENST00000454134 ABCB5Q2M3G0 1257 aa19.86■□□□□ 0.77
NCKIPSD-208ENST00000454134 CRBNQ96SW2 442 aa19.86■□□□□ 0.77
NCKIPSD-208ENST00000454134 EMILIN3Q9NT22 766 aa19.86■□□□□ 0.77
NCKIPSD-208ENST00000454134 MYH7P12883 1935 aa19.85■□□□□ 0.77
NCKIPSD-208ENST00000454134 PEX10O60683 326 aa19.85■□□□□ 0.77
NCKIPSD-208ENST00000454134 FLT3LGP49771 235 aa19.85■□□□□ 0.77
NCKIPSD-208ENST00000454134 UBE3CQ15386 1083 aa19.85■□□□□ 0.77
NCKIPSD-208ENST00000454134 MTFR1Q15390 333 aa19.85■□□□□ 0.77
NCKIPSD-208ENST00000454134 SLC44A5Q8NCS7 719 aa19.85■□□□□ 0.77
NCKIPSD-208ENST00000454134 P2RX7Q99572 595 aaKnown RBP19.85■□□□□ 0.77
NCKIPSD-208ENST00000454134 FEZ1Q99689 392 aa19.85■□□□□ 0.77
NCKIPSD-208ENST00000454134 HOXA7P31268 230 aaPredicted RBP19.84■□□□□ 0.77
NCKIPSD-208ENST00000454134 USP17L2Q6R6M4 530 aa19.84■□□□□ 0.77
NCKIPSD-208ENST00000454134 ACER1Q8TDN7 264 aa19.84■□□□□ 0.77
NCKIPSD-208ENST00000454134 GPATCH3Q96I76 525 aa19.84■□□□□ 0.77
NCKIPSD-208ENST00000454134 CABP5Q9NP86 173 aa19.84■□□□□ 0.77
NCKIPSD-208ENST00000454134 BIN2Q9UBW5 565 aaPredicted RBP19.84■□□□□ 0.77
NCKIPSD-208ENST00000454134 BRCA2P51587 3418 aa19.84■□□□□ 0.77
NCKIPSD-208ENST00000454134 PDE4DIPQ5VU43 2346 aa19.84■□□□□ 0.77
NCKIPSD-208ENST00000454134 CYP2D7A0A087X1C5 515 aa19.83■□□□□ 0.77
NCKIPSD-208ENST00000454134 SMIM22K7EJ46 135 aa19.83■□□□□ 0.77
NCKIPSD-208ENST00000454134 GUCY1A2P33402 732 aa19.83■□□□□ 0.77
NCKIPSD-208ENST00000454134 ZSCAN25Q6NSZ9 544 aa19.83■□□□□ 0.77
NCKIPSD-208ENST00000454134 DYNLL2Q96FJ2 89 aa19.83■□□□□ 0.77
NCKIPSD-208ENST00000454134 PUS7LQ9H0K6 701 aaKnown RBP19.83■□□□□ 0.77
NCKIPSD-208ENST00000454134 ATP8A2Q9NTI2 1148 aa19.83■□□□□ 0.77
NCKIPSD-208ENST00000454134 TAOK2Q9UL54 1235 aa19.83■□□□□ 0.77
NCKIPSD-208ENST00000454134 BAZ2AQ9UIF9 1905 aaKnown RBP19.82■□□□□ 0.76
NCKIPSD-208ENST00000454134 MPHOSPH10O00566 681 aaKnown RBP19.82■□□□□ 0.76
NCKIPSD-208ENST00000454134 ADCY3O60266 1144 aa19.82■□□□□ 0.76
NCKIPSD-208ENST00000454134 ELNP15502 786 aa19.82■□□□□ 0.76
NCKIPSD-208ENST00000454134 HERVK_113P62684 666 aa19.82■□□□□ 0.76
NCKIPSD-208ENST00000454134 SEPT2Q15019 361 aa19.82■□□□□ 0.76
NCKIPSD-208ENST00000454134 OTUD7AQ8TE49 926 aaPredicted RBP19.82■□□□□ 0.76
NCKIPSD-208ENST00000454134 COA7Q96BR5 231 aa19.82■□□□□ 0.76
NCKIPSD-208ENST00000454134 TXNRD2Q9NNW7 524 aa19.82■□□□□ 0.76
NCKIPSD-208ENST00000454134 SLC4A4Q9Y6R1 1079 aa19.82■□□□□ 0.76
NCKIPSD-208ENST00000454134 KBTBD3Q8NAB2 608 aa19.81■□□□□ 0.76
NCKIPSD-208ENST00000454134 SLAIN1Q8ND83 568 aa19.81■□□□□ 0.76
NCKIPSD-208ENST00000454134 KIAA1683Q9H0B3 1180 aa19.81■□□□□ 0.76
NCKIPSD-208ENST00000454134 MORF4L1Q9UBU8 362 aa19.81■□□□□ 0.76
NCKIPSD-208ENST00000454134 DOCK3Q8IZD9 2030 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms