RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 GUCA1BQ9UMX6 200 aa22.29■■□□□ 1.16
LMBR1-213ENST00000454132 CTAGE15A4D2H0 777 aa22.28■■□□□ 1.16
LMBR1-213ENST00000454132 ERLIN1O75477 346 aa22.28■■□□□ 1.16
LMBR1-213ENST00000454132 CTAGE8P0CG41 777 aa22.28■■□□□ 1.16
LMBR1-213ENST00000454132 CTAGE6Q86UF2 777 aa22.28■■□□□ 1.16
LMBR1-213ENST00000454132 CTAGE4Q8IX94 777 aa22.28■■□□□ 1.16
LMBR1-213ENST00000454132 IGDCC4Q8TDY8 1250 aa22.28■■□□□ 1.16
LMBR1-213ENST00000454132 LY9Q9HBG7 655 aa22.28■■□□□ 1.16
LMBR1-213ENST00000454132 NOP2P46087 812 aaKnown RBP22.28■■□□□ 1.16
LMBR1-213ENST00000454132 LRRC31Q6UY01 552 aa22.28■■□□□ 1.16
LMBR1-213ENST00000454132 BLZF1Q9H2G9 400 aa22.28■■□□□ 1.16
LMBR1-213ENST00000454132 ZSWIM5Q9P217 1185 aa22.28■■□□□ 1.16
LMBR1-213ENST00000454132 FAM237AA0A1B0GTK4 181 aa22.27■■□□□ 1.16
LMBR1-213ENST00000454132 GYPCP04921 128 aa22.27■■□□□ 1.16
LMBR1-213ENST00000454132 SARSP49591 514 aaKnown RBP22.27■■□□□ 1.16
LMBR1-213ENST00000454132 PLCD1P51178 756 aa22.27■■□□□ 1.16
LMBR1-213ENST00000454132 ERVK-24P63145 666 aa22.27■■□□□ 1.16
LMBR1-213ENST00000454132 APTXQ7Z2E3 356 aaKnown RBP22.27■■□□□ 1.16
LMBR1-213ENST00000454132 PIH1D3Q9NQM4 214 aaKnown RBP22.27■■□□□ 1.16
LMBR1-213ENST00000454132 TACC3Q9Y6A5 838 aa22.27■■□□□ 1.16
LMBR1-213ENST00000454132 EIF3CLB5ME19 914 aaKnown RBP22.27■■□□□ 1.16
LMBR1-213ENST00000454132 ACTN4O43707 911 aaKnown RBP22.27■■□□□ 1.16
LMBR1-213ENST00000454132 EIF3JO75822 258 aaKnown RBP22.27■■□□□ 1.16
LMBR1-213ENST00000454132 EIF3CQ99613 913 aaKnown RBP22.27■■□□□ 1.16
LMBR1-213ENST00000454132 PSD3Q9NYI0 1048 aa22.27■■□□□ 1.16
LMBR1-213ENST00000454132 WWC3Q9ULE0 1092 aa22.27■■□□□ 1.16
LMBR1-213ENST00000454132 SNAP23O00161 211 aa22.27■■□□□ 1.15
LMBR1-213ENST00000454132 PES1O00541 588 aaKnown RBP22.27■■□□□ 1.15
LMBR1-213ENST00000454132 MFAP3LO75121 409 aa22.27■■□□□ 1.15
LMBR1-213ENST00000454132 PTPREP23469 700 aa22.27■■□□□ 1.15
LMBR1-213ENST00000454132 DPYDQ12882 1025 aa22.27■■□□□ 1.15
LMBR1-213ENST00000454132 ZNF532Q9HCE3 1301 aa22.26■■□□□ 1.15
LMBR1-213ENST00000454132 SYNRGQ9UMZ2 1314 aa22.26■■□□□ 1.15
LMBR1-213ENST00000454132 SAFBQ15424 915 aaKnown RBP eCLIP22.26■■□□□ 1.15
LMBR1-213ENST00000454132 PANX2Q96RD6 677 aa22.26■■□□□ 1.15
LMBR1-213ENST00000454132 NUP88Q99567 741 aaPredicted RBP22.26■■□□□ 1.15
LMBR1-213ENST00000454132 CTNND2Q9UQB3 1225 aa22.26■■□□□ 1.15
LMBR1-213ENST00000454132 ZFYP08048 801 aaPredicted RBP22.26■■□□□ 1.15
LMBR1-213ENST00000454132 HELBQ8NG08 1087 aaPredicted RBP22.26■■□□□ 1.15
LMBR1-213ENST00000454132 DACH1Q9UI36 760 aa22.26■■□□□ 1.15
LMBR1-213ENST00000454132 MRPS25P82663 173 aaKnown RBP22.25■■□□□ 1.15
LMBR1-213ENST00000454132 METTL24Q5JXM2 366 aa22.25■■□□□ 1.15
LMBR1-213ENST00000454132 MSANTD4Q8NCY6 345 aa22.25■■□□□ 1.15
LMBR1-213ENST00000454132 CHP1Q99653 195 aa22.25■■□□□ 1.15
LMBR1-213ENST00000454132 NAPGQ99747 312 aaPredicted RBP22.25■■□□□ 1.15
LMBR1-213ENST00000454132 TAB2Q9NYJ8 693 aa22.25■■□□□ 1.15
LMBR1-213ENST00000454132 RAB21Q9UL25 225 aa22.25■■□□□ 1.15
LMBR1-213ENST00000454132 MMP1P03956 469 aa22.25■■□□□ 1.15
LMBR1-213ENST00000454132 EEF2KMTQ96G04 330 aa22.25■■□□□ 1.15
LMBR1-213ENST00000454132 ADD3Q9UEY8 706 aaKnown RBP22.25■■□□□ 1.15
LMBR1-213ENST00000454132 WNT7AO00755 349 aa22.24■■□□□ 1.15
LMBR1-213ENST00000454132 PRDM1O75626 825 aa22.24■■□□□ 1.15
LMBR1-213ENST00000454132 NOM1Q5C9Z4 860 aaKnown RBP22.24■■□□□ 1.15
LMBR1-213ENST00000454132 RNF40O75150 1001 aa22.24■■□□□ 1.15
LMBR1-213ENST00000454132 EARS2Q5JPH6 523 aaKnown RBP22.24■■□□□ 1.15
LMBR1-213ENST00000454132 N4BP3O15049 544 aa22.24■■□□□ 1.15
LMBR1-213ENST00000454132 FKBP15Q5T1M5 1219 aa22.24■■□□□ 1.15
LMBR1-213ENST00000454132 RASGRP2Q7LDG7 609 aa22.24■■□□□ 1.15
LMBR1-213ENST00000454132 KRT28Q7Z3Y7 464 aa22.24■■□□□ 1.15
LMBR1-213ENST00000454132 GPIHBP1Q8IV16 184 aa22.24■■□□□ 1.15
LMBR1-213ENST00000454132 HNRNPLLQ8WVV9 542 aaKnown RBP22.24■■□□□ 1.15
LMBR1-213ENST00000454132 DRC1Q96MC2 740 aa22.24■■□□□ 1.15
LMBR1-213ENST00000454132 PRKAB2O43741 272 aa22.23■■□□□ 1.15
LMBR1-213ENST00000454132 MYH8P13535 1937 aa22.23■■□□□ 1.15
LMBR1-213ENST00000454132 ADD2P35612 726 aa22.23■■□□□ 1.15
LMBR1-213ENST00000454132 USP5P45974 858 aa22.23■■□□□ 1.15
LMBR1-213ENST00000454132 PLEKHG2Q9H7P9 1386 aa22.22■■□□□ 1.15
LMBR1-213ENST00000454132 SMIM22K7EJ46 135 aa22.22■■□□□ 1.15
LMBR1-213ENST00000454132 MYO1BO43795 1136 aa22.22■■□□□ 1.15
LMBR1-213ENST00000454132 GPTP24298 496 aa22.22■■□□□ 1.15
LMBR1-213ENST00000454132 GTF2A1P52655 376 aaPredicted RBP22.22■■□□□ 1.15
LMBR1-213ENST00000454132 SPATA1Q5VX52 437 aa22.22■■□□□ 1.15
LMBR1-213ENST00000454132 AIDAQ96BJ3 306 aa22.22■■□□□ 1.15
LMBR1-213ENST00000454132 MYO6Q9UM54 1294 aa22.22■■□□□ 1.15
LMBR1-213ENST00000454132 IVLP07476 585 aa22.22■■□□□ 1.15
LMBR1-213ENST00000454132 C4AP0C0L4 1744 aa22.21■■□□□ 1.15
LMBR1-213ENST00000454132 C4BP0C0L5 1744 aa22.21■■□□□ 1.15
LMBR1-213ENST00000454132 TTC31Q49AM3 519 aaPredicted RBP22.21■■□□□ 1.15
LMBR1-213ENST00000454132 TTC19Q6DKK2 380 aaPredicted RBP22.21■■□□□ 1.15
LMBR1-213ENST00000454132 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.21■■□□□ 1.152e-6■■■□□ 14.7
LMBR1-213ENST00000454132 EHD4Q9H223 541 aa22.21■■□□□ 1.15
LMBR1-213ENST00000454132 ARMT1Q9H993 441 aa22.21■■□□□ 1.15
LMBR1-213ENST00000454132 VPS54Q9P1Q0 977 aa22.21■■□□□ 1.15
LMBR1-213ENST00000454132 ARHGAP25P42331 645 aa22.21■■□□□ 1.15
LMBR1-213ENST00000454132 SART3Q15020 963 aaKnown RBP22.21■■□□□ 1.15
LMBR1-213ENST00000454132 NT5DC1Q5TFE4 455 aa22.21■■□□□ 1.15
LMBR1-213ENST00000454132 DCAF5Q96JK2 942 aa22.21■■□□□ 1.15
LMBR1-213ENST00000454132 MEGF6O75095 1541 aa22.21■■□□□ 1.15
LMBR1-213ENST00000454132 OVOS2A0A0G2JMS6 1433 aa22.21■■□□□ 1.15
LMBR1-213ENST00000454132 FMNL1O95466 1100 aaPredicted RBP22.2■■□□□ 1.15
LMBR1-213ENST00000454132 FILIP1LQ4L180 1135 aa22.2■■□□□ 1.15
LMBR1-213ENST00000454132 LDHAL6AQ6ZMR3 332 aa22.2■■□□□ 1.15
LMBR1-213ENST00000454132 SYMPKQ92797 1274 aaKnown RBP22.2■■□□□ 1.15
LMBR1-213ENST00000454132 PAGE5Q96GU1 130 aa22.2■■□□□ 1.15
LMBR1-213ENST00000454132 RGPD5Q99666 1765 aa22.2■■□□□ 1.14
LMBR1-213ENST00000454132 PHKA1P46020 1223 aa22.2■■□□□ 1.14
LMBR1-213ENST00000454132 ZNF174Q15697 407 aa22.2■■□□□ 1.14
LMBR1-213ENST00000454132 MMS19Q96T76 1030 aa22.2■■□□□ 1.14
LMBR1-213ENST00000454132 SIPA1L3O60292 1781 aaPredicted RBP22.2■■□□□ 1.14
LMBR1-213ENST00000454132 ARFGEF2Q9Y6D5 1785 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms