RNA–Protein interactions for RNA: ENST00000453634.5

CHKB-CPT1B-202, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHKB-CPT1B, Length 2,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-202ENST00000453634 NBPF3Q9H094 633 aa12.69□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 UBN2Q6ZU65 1347 aa12.69□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 PARP4Q9UKK3 1724 aaKnown RBP12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 PHACTR2O75167 634 aa12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 GYPCP04921 128 aa12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 FKBP4Q02790 459 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 MMS22LQ6ZRQ5 1243 aa12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 SGMS1Q86VZ5 419 aa12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 PHKBQ93100 1093 aa12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 HPCAL4Q9UM19 191 aa12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 SRPRBQ9Y5M8 271 aaKnown RBP12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 RANBP6O60518 1105 aaKnown RBP12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 SPECC1Q5M775 1068 aa12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 CYP26C1Q6V0L0 522 aa12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 CPLX3Q8WVH0 158 aa12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 PUS7LQ9H0K6 701 aaKnown RBP12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 FOXP1Q9H334 677 aaPredicted RBP12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 FAM217BQ9NTX9 383 aaPredicted RBP12.68□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 LRRC10BA6NIK2 292 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 ZBTB43O43298 467 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 MMP1P03956 469 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 KCNA6P17658 529 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 TRIM14Q14142 442 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 LRRC24Q50LG9 513 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 CYB5R4Q7L1T6 521 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 RPGRIP1Q96KN7 1286 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 MYCBPQ99417 103 aaPredicted RBP12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 TBC1D2BQ9UPU7 963 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 CDHR2Q9BYE9 1310 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 SYNRGQ9UMZ2 1314 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 ZC3H4Q9UPT8 1303 aaKnown RBP12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 MST1RQ04912 1400 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 KIF1AQ12756 1690 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 FMNL1O95466 1100 aaPredicted RBP12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 FXR1P51114 621 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 TRAPPC11Q7Z392 1133 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 ACRBPQ8NEB7 543 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 IGDCC4Q8TDY8 1250 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 COG1Q8WTW3 980 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 CEP89Q96ST8 783 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 CEP131Q9UPN4 1083 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 NID2Q14112 1375 aa12.67□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 PSMD14O00487 310 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 GPAA1O43292 621 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 GCP02774 474 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 ERVK-24P63145 666 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 GRIN1Q05586 938 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 SSRP1Q08945 709 aaKnown RBP12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 SAFBQ15424 915 aaKnown RBP eCLIP12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 ABHD10Q9NUJ1 306 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 MYO5AQ9Y4I1 1855 aaKnown RBP12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 TFRCP02786 760 aaKnown RBP12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 MYH7P12883 1935 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 NBPF14Q5TI25 921 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 SH3RF1Q7Z6J0 888 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 BCL9LQ86UU0 1499 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 GSDMAQ96QA5 445 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 SEC31BQ9NQW1 1179 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 CEP126Q9P2H0 1117 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 LAMB4A4D0S4 1761 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 TJP1Q07157 1748 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 ATRNO75882 1429 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 ABL1P00519 1130 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 LIFRP42702 1097 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 MCTP2Q6DN12 878 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 TBC1D10CQ8IV04 446 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 GRAMD1CQ8IYS0 662 aa12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 LIMA1Q9UHB6 759 aaKnown RBP12.66□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 GOLGA8AA7E2F4 631 aa12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 BTBD18B2RXH4 712 aa12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 IFNAR1P17181 557 aa12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 STIM1Q13586 685 aa12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 NCAPH2Q6IBW4 605 aa12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 LY9Q9HBG7 655 aa12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 CWC25Q9NXE8 425 aaPredicted RBP12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 ZNF662Q6ZS27 426 aa12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 MICU3Q86XE3 530 aa12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 DIS3L2Q8IYB7 885 aaKnown RBP12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 SMARCC1Q92922 1105 aaPredicted RBP12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 ZBTB9Q96C00 473 aa12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 DRC1Q96MC2 740 aa12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 HAUS4Q9H6D7 363 aa12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 STRN4Q9NRL3 753 aa12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 AATFQ9NY61 560 aaKnown RBP eCLIP12.65□□□□□ -0.38
CHKB-CPT1B-202ENST00000453634 PPP1R3GB7ZBB8 358 aa12.64□□□□□ -0.39
CHKB-CPT1B-202ENST00000453634 RXRAP19793 462 aa12.64□□□□□ -0.39
CHKB-CPT1B-202ENST00000453634 SF3B2Q13435 895 aaKnown RBP12.64□□□□□ -0.39
CHKB-CPT1B-202ENST00000453634 PAPD7Q5XG87 772 aaKnown RBP12.64□□□□□ -0.39
CHKB-CPT1B-202ENST00000453634 XAGE2Q96GT9 111 aa12.64□□□□□ -0.39
CHKB-CPT1B-202ENST00000453634 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■■■□□ 17.9
CHKB-CPT1B-202ENST00000453634 LRP6O75581 1613 aa12.64□□□□□ -0.39
CHKB-CPT1B-202ENST00000453634 PHKG2P15735 406 aa12.64□□□□□ -0.39
CHKB-CPT1B-202ENST00000453634 CCDC91Q7Z6B0 441 aa12.64□□□□□ -0.39
CHKB-CPT1B-202ENST00000453634 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
CHKB-CPT1B-202ENST00000453634 SLC26A6Q9BXS9 759 aa12.64□□□□□ -0.39
CHKB-CPT1B-202ENST00000453634 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.395e-7■■■□□ 16
CHKB-CPT1B-202ENST00000453634 IQSEC3Q9UPP2 1182 aaPredicted RBP12.64□□□□□ -0.39
CHKB-CPT1B-202ENST00000453634 NUP188Q5SRE5 1749 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms