RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 SLC9C1Q4G0N8 1177 aa18.76■□□□□ 0.59
VCX3B-204ENST00000453306 ZKSCAN4Q969J2 545 aaPredicted RBP18.76■□□□□ 0.59
VCX3B-204ENST00000453306 CRNKL1Q9BZJ0 848 aaKnown RBP18.76■□□□□ 0.59
VCX3B-204ENST00000453306 OSBPL5Q9H0X9 879 aaPredicted RBP18.76■□□□□ 0.59
VCX3B-204ENST00000453306 PALD1Q9ULE6 856 aa18.76■□□□□ 0.59
VCX3B-204ENST00000453306 CCDC171Q6TFL3 1326 aa18.75■□□□□ 0.59
VCX3B-204ENST00000453306 PATL2C9JE40 543 aaKnown RBP18.75■□□□□ 0.59
VCX3B-204ENST00000453306 GNRH1P01148 92 aa18.75■□□□□ 0.59
VCX3B-204ENST00000453306 HSPD1P10809 573 aaKnown RBP18.75■□□□□ 0.59
VCX3B-204ENST00000453306 ATRNL1Q5VV63 1379 aa18.74■□□□□ 0.59
VCX3B-204ENST00000453306 BTBD19C9JJ37 291 aa18.74■□□□□ 0.59
VCX3B-204ENST00000453306 IRF6O14896 467 aa18.74■□□□□ 0.59
VCX3B-204ENST00000453306 USP5P45974 858 aa18.74■□□□□ 0.59
VCX3B-204ENST00000453306 PLCD1P51178 756 aa18.74■□□□□ 0.59
VCX3B-204ENST00000453306 SLC4A8Q2Y0W8 1093 aa18.74■□□□□ 0.59
VCX3B-204ENST00000453306 IFNL3Q8IZI9 196 aa18.74■□□□□ 0.59
VCX3B-204ENST00000453306 TACC3Q9Y6A5 838 aa18.74■□□□□ 0.59
VCX3B-204ENST00000453306 USP17L12C9JPN9 530 aa18.73■□□□□ 0.59
VCX3B-204ENST00000453306 USP17L21D6R901 530 aa18.73■□□□□ 0.59
VCX3B-204ENST00000453306 PRMT2P55345 433 aa18.73■□□□□ 0.59
VCX3B-204ENST00000453306 CTR9Q6PD62 1173 aa18.73■□□□□ 0.59
VCX3B-204ENST00000453306 MIGA2Q7L4E1 593 aa18.73■□□□□ 0.59
VCX3B-204ENST00000453306 CERS3Q8IU89 383 aa18.73■□□□□ 0.59
VCX3B-204ENST00000453306 ZNF333Q96JL9 665 aa18.73■□□□□ 0.59
VCX3B-204ENST00000453306 ATP8A2Q9NTI2 1148 aa18.73■□□□□ 0.59
VCX3B-204ENST00000453306 HTTP42858 3142 aa18.72■□□□□ 0.59
VCX3B-204ENST00000453306 FGAP02671 866 aa18.72■□□□□ 0.59
VCX3B-204ENST00000453306 LACTBP83111 547 aaPredicted RBP18.72■□□□□ 0.59
VCX3B-204ENST00000453306 LSG1Q9H089 658 aaKnown RBP18.72■□□□□ 0.59
VCX3B-204ENST00000453306 PTCH2Q9Y6C5 1203 aa18.72■□□□□ 0.59
VCX3B-204ENST00000453306 SEC24BO95487 1268 aa18.71■□□□□ 0.59
VCX3B-204ENST00000453306 GNAT2P19087 354 aa18.71■□□□□ 0.59
VCX3B-204ENST00000453306 EN2P19622 333 aaPredicted RBP18.71■□□□□ 0.59
VCX3B-204ENST00000453306 RRP1BQ14684 758 aaKnown RBP18.71■□□□□ 0.59
VCX3B-204ENST00000453306 ALX1Q15699 326 aa18.71■□□□□ 0.59
VCX3B-204ENST00000453306 C8orf34Q49A92 452 aa18.71■□□□□ 0.59
VCX3B-204ENST00000453306 DNAJC18Q9H819 358 aa18.71■□□□□ 0.59
VCX3B-204ENST00000453306 MCM9Q9NXL9 1143 aa18.71■□□□□ 0.59
VCX3B-204ENST00000453306 ZNF112Q9UJU3 913 aa18.71■□□□□ 0.59
VCX3B-204ENST00000453306 RAD50Q92878 1312 aa18.71■□□□□ 0.59
VCX3B-204ENST00000453306 RBBP6Q7Z6E9 1792 aaKnown RBP18.7■□□□□ 0.58
VCX3B-204ENST00000453306 FAM196BA6NMK8 535 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 APPP05067 770 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 INPP5BP32019 993 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 CAP1Q01518 475 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 MAP3K10Q02779 954 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 C12orf60Q5U649 245 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 GIMAP6Q6P9H5 292 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 ANKRD23Q86SG2 305 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 METTL16Q86W50 562 aaKnown RBP18.7■□□□□ 0.58
VCX3B-204ENST00000453306 NKX2-3Q8TAU0 364 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 RUFY2Q8WXA3 655 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 DYNLL2Q96FJ2 89 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 INCENPQ9NQS7 918 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 TAF6LQ9Y6J9 622 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 MYH7P12883 1935 aa18.7■□□□□ 0.58
VCX3B-204ENST00000453306 HOXD10P28358 340 aa18.69■□□□□ 0.58
VCX3B-204ENST00000453306 GABPAQ06546 454 aa18.69■□□□□ 0.58
VCX3B-204ENST00000453306 SBK1Q52WX2 424 aa18.69■□□□□ 0.58
VCX3B-204ENST00000453306 NOL9Q5SY16 702 aaKnown RBP18.69■□□□□ 0.58
VCX3B-204ENST00000453306 DSCC1Q9BVC3 393 aa18.69■□□□□ 0.58
VCX3B-204ENST00000453306 NBPF3Q9H094 633 aa18.69■□□□□ 0.58
VCX3B-204ENST00000453306 KCNH4Q9UQ05 1017 aa18.69■□□□□ 0.58
VCX3B-204ENST00000453306 PDHXO00330 501 aa18.68■□□□□ 0.58
VCX3B-204ENST00000453306 JAG1P78504 1218 aa18.68■□□□□ 0.58
VCX3B-204ENST00000453306 ZSCAN29Q8IWY8 852 aaPredicted RBP18.68■□□□□ 0.58
VCX3B-204ENST00000453306 SLC44A5Q8NCS7 719 aa18.68■□□□□ 0.58
VCX3B-204ENST00000453306 MAP4K1Q92918 833 aa18.68■□□□□ 0.58
VCX3B-204ENST00000453306 COL2A1P02458 1487 aaPredicted RBP18.68■□□□□ 0.58
VCX3B-204ENST00000453306 PHF20L1A8MW92 1017 aa18.67■□□□□ 0.58
VCX3B-204ENST00000453306 SHROOM1Q2M3G4 852 aaPredicted RBP18.67■□□□□ 0.58
VCX3B-204ENST00000453306 C17orf99Q6UX52 265 aa18.67■□□□□ 0.58
VCX3B-204ENST00000453306 CENPFP49454 3210 aa18.67■□□□□ 0.58
VCX3B-204ENST00000453306 MINDY4BA8MYZ0 360 aa18.66■□□□□ 0.58
VCX3B-204ENST00000453306 CXCL11O14625 94 aa18.66■□□□□ 0.58
VCX3B-204ENST00000453306 POLR3DP05423 398 aaPredicted RBP18.66■□□□□ 0.58
VCX3B-204ENST00000453306 TDO2P48775 406 aa18.66■□□□□ 0.58
VCX3B-204ENST00000453306 PARK7Q99497 189 aaKnown RBP18.66■□□□□ 0.58
VCX3B-204ENST00000453306 ARHGAP39Q9C0H5 1083 aa18.66■□□□□ 0.58
VCX3B-204ENST00000453306 DHX36Q9H2U1 1008 aaKnown RBP18.66■□□□□ 0.58
VCX3B-204ENST00000453306 PICK1Q9NRD5 415 aa18.66■□□□□ 0.58
VCX3B-204ENST00000453306 PI4KBQ9UBF8 816 aa18.66■□□□□ 0.58
VCX3B-204ENST00000453306 PSMC4P43686 418 aa18.65■□□□□ 0.58
VCX3B-204ENST00000453306 MFAP1P55081 439 aaKnown RBP18.65■□□□□ 0.58
VCX3B-204ENST00000453306 HAND2P61296 217 aa18.65■□□□□ 0.58
VCX3B-204ENST00000453306 CTDSPL2Q05D32 466 aa18.65■□□□□ 0.58
VCX3B-204ENST00000453306 COL9A3Q14050 684 aaPredicted RBP18.65■□□□□ 0.58
VCX3B-204ENST00000453306 FASTKD5Q7L8L6 764 aaKnown RBP18.65■□□□□ 0.58
VCX3B-204ENST00000453306 FOXP4Q8IVH2 680 aaPredicted RBP18.65■□□□□ 0.58
VCX3B-204ENST00000453306 STK11IPQ8N1F8 1099 aa18.65■□□□□ 0.58
VCX3B-204ENST00000453306 SH3TC2Q8TF17 1288 aa18.65■□□□□ 0.58
VCX3B-204ENST00000453306 NAPBQ9H115 298 aa18.65■□□□□ 0.58
VCX3B-204ENST00000453306 CPA4Q9UI42 421 aa18.65■□□□□ 0.58
VCX3B-204ENST00000453306 RBM8AQ9Y5S9 174 aaKnown RBP18.65■□□□□ 0.58
VCX3B-204ENST00000453306 DDX60LQ5H9U9 1706 aaKnown RBP18.64■□□□□ 0.57
VCX3B-204ENST00000453306 TBC1D12O60347 775 aa18.64■□□□□ 0.57
VCX3B-204ENST00000453306 FMNL1O95466 1100 aaPredicted RBP18.64■□□□□ 0.57
VCX3B-204ENST00000453306 SHMT1P34896 483 aa18.64■□□□□ 0.57
VCX3B-204ENST00000453306 PPARAQ07869 468 aa18.64■□□□□ 0.57
VCX3B-204ENST00000453306 NECTIN1Q15223 517 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms