RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.3□□□□□ -0.12
GARNL3-210ENST00000453030 PIH1D3Q9NQM4 214 aaKnown RBP14.3□□□□□ -0.12
GARNL3-210ENST00000453030 TMOD4Q9NZQ9 345 aa14.3□□□□□ -0.12
GARNL3-210ENST00000453030 DBNLQ9UJU6 430 aaKnown RBP14.3□□□□□ -0.12
GARNL3-210ENST00000453030 PALD1Q9ULE6 856 aa14.3□□□□□ -0.12
GARNL3-210ENST00000453030 NR2E3Q9Y5X4 410 aa14.3□□□□□ -0.12
GARNL3-210ENST00000453030 PEX10O60683 326 aa14.29□□□□□ -0.12
GARNL3-210ENST00000453030 HMGCRP04035 888 aa14.29□□□□□ -0.12
GARNL3-210ENST00000453030 DYNLL1P63167 89 aaKnown RBP14.29□□□□□ -0.12
GARNL3-210ENST00000453030 DIS3LQ8TF46 1054 aaKnown RBP14.29□□□□□ -0.12
GARNL3-210ENST00000453030 WDR18Q9BV38 432 aa14.29□□□□□ -0.12
GARNL3-210ENST00000453030 CCDC8Q9H0W5 538 aaPredicted RBP14.29□□□□□ -0.12
GARNL3-210ENST00000453030 ZBTB21Q9ULJ3 1066 aa14.29□□□□□ -0.12
GARNL3-210ENST00000453030 ZBTB7BO15156 539 aaPredicted RBP14.28□□□□□ -0.12
GARNL3-210ENST00000453030 EVI5O60447 810 aa14.28□□□□□ -0.12
GARNL3-210ENST00000453030 IDH1O75874 414 aaKnown RBP14.28□□□□□ -0.12
GARNL3-210ENST00000453030 HLA-DOAP06340 250 aa14.28□□□□□ -0.12
GARNL3-210ENST00000453030 RLBP1P12271 317 aa14.28□□□□□ -0.12
GARNL3-210ENST00000453030 CYP7A1P22680 504 aa14.28□□□□□ -0.12
GARNL3-210ENST00000453030 BACE1P56817 501 aa14.28□□□□□ -0.12
GARNL3-210ENST00000453030 PPP4CP60510 307 aa14.28□□□□□ -0.12
GARNL3-210ENST00000453030 ATP8B2P98198 1209 aa14.28□□□□□ -0.12
GARNL3-210ENST00000453030 HNRNPUQ00839 825 aaKnown RBP eCLIP14.28□□□□□ -0.12
GARNL3-210ENST00000453030 TRIM32Q13049 653 aa14.28□□□□□ -0.12
GARNL3-210ENST00000453030 MIGA1Q8NAN2 632 aa14.28□□□□□ -0.12
GARNL3-210ENST00000453030 PAWRQ96IZ0 340 aaKnown RBP14.28□□□□□ -0.12
GARNL3-210ENST00000453030 NDUFB9Q9Y6M9 179 aa14.28□□□□□ -0.12
GARNL3-210ENST00000453030 HERVK_113P62684 666 aa14.27□□□□□ -0.13
GARNL3-210ENST00000453030 CRISPLD2Q9H0B8 497 aa14.27□□□□□ -0.13
GARNL3-210ENST00000453030 MORF4L1Q9UBU8 362 aa14.27□□□□□ -0.13
GARNL3-210ENST00000453030 DNAH12Q6ZR08 3092 aa14.27□□□□□ -0.13
GARNL3-210ENST00000453030 MYH7P12883 1935 aa14.26□□□□□ -0.13
GARNL3-210ENST00000453030 BAZ2AQ9UIF9 1905 aaKnown RBP14.26□□□□□ -0.13
GARNL3-210ENST00000453030 USP17L10C9JJH3 530 aa14.26□□□□□ -0.13
GARNL3-210ENST00000453030 CYP2B6P20813 491 aa14.26□□□□□ -0.13
GARNL3-210ENST00000453030 ZYXQ15942 572 aaKnown RBP14.26□□□□□ -0.13
GARNL3-210ENST00000453030 NECAB2Q7Z6G3 386 aa14.26□□□□□ -0.13
GARNL3-210ENST00000453030 METTL16Q86W50 562 aaKnown RBP14.26□□□□□ -0.13
GARNL3-210ENST00000453030 MAGEB6Q8N7X4 407 aa14.26□□□□□ -0.13
GARNL3-210ENST00000453030 TRIB2Q92519 343 aa14.26□□□□□ -0.13
GARNL3-210ENST00000453030 EAF2Q96CJ1 260 aaPredicted RBP14.26□□□□□ -0.13
GARNL3-210ENST00000453030 ZNF512BQ96KM6 892 aaPredicted RBP14.26□□□□□ -0.13
GARNL3-210ENST00000453030 P2RX7Q99572 595 aaKnown RBP14.26□□□□□ -0.13
GARNL3-210ENST00000453030 PAGR1Q9BTK6 254 aa14.26□□□□□ -0.13
GARNL3-210ENST00000453030 TXNRD2Q9NNW7 524 aa14.26□□□□□ -0.13
GARNL3-210ENST00000453030 GJD2Q9UKL4 321 aa14.26□□□□□ -0.13
GARNL3-210ENST00000453030 COL6A3P12111 3177 aa14.26□□□□□ -0.13
GARNL3-210ENST00000453030 GH2P01242 217 aa14.25□□□□□ -0.13
GARNL3-210ENST00000453030 HOXA7P31268 230 aaPredicted RBP14.25□□□□□ -0.13
GARNL3-210ENST00000453030 USP5P45974 858 aa14.25□□□□□ -0.13
GARNL3-210ENST00000453030 FOXP4Q8IVH2 680 aaPredicted RBP14.25□□□□□ -0.13
GARNL3-210ENST00000453030 C7orf61Q8IZ16 206 aa14.25□□□□□ -0.13
GARNL3-210ENST00000453030 GPRC5AQ8NFJ5 357 aa14.25□□□□□ -0.13
GARNL3-210ENST00000453030 FEZ1Q99689 392 aa14.25□□□□□ -0.13
GARNL3-210ENST00000453030 PRO3102Q9H379 93 aa14.25□□□□□ -0.13
GARNL3-210ENST00000453030 HMX1Q9NP08 348 aaPredicted RBP14.25□□□□□ -0.13
GARNL3-210ENST00000453030 EXOC6BQ9Y2D4 811 aa14.25□□□□□ -0.13
GARNL3-210ENST00000453030 NOP58Q9Y2X3 529 aaKnown RBP14.25□□□□□ -0.13
GARNL3-210ENST00000453030 RPTORQ8N122 1335 aa14.24□□□□□ -0.13
GARNL3-210ENST00000453030 C19orf81C9J6K1 198 aa14.24□□□□□ -0.13
GARNL3-210ENST00000453030 PRKAR2AP13861 404 aaKnown RBP14.24□□□□□ -0.13
GARNL3-210ENST00000453030 ERVK-9P63128 1117 aa14.24□□□□□ -0.13
GARNL3-210ENST00000453030 ERVK-24P63145 666 aa14.24□□□□□ -0.13
GARNL3-210ENST00000453030 PDE3AQ14432 1141 aa14.24□□□□□ -0.13
GARNL3-210ENST00000453030 CEP85Q6P2H3 762 aa14.24□□□□□ -0.13
GARNL3-210ENST00000453030 CCAR1Q8IX12 1150 aaKnown RBP14.24□□□□□ -0.13
GARNL3-210ENST00000453030 SOCS4Q8WXH5 440 aa14.24□□□□□ -0.13
GARNL3-210ENST00000453030 NUDT12Q9BQG2 462 aa14.24□□□□□ -0.13
GARNL3-210ENST00000453030 ANTXR1Q9H6X2 564 aa14.24□□□□□ -0.13
GARNL3-210ENST00000453030 GINM1Q9NU53 330 aa14.24□□□□□ -0.13
GARNL3-210ENST00000453030 CAPN2P17655 700 aa14.23□□□□□ -0.13
GARNL3-210ENST00000453030 AACSQ86V21 672 aa14.23□□□□□ -0.13
GARNL3-210ENST00000453030 ANKLE1Q8NAG6 615 aa14.23□□□□□ -0.13
GARNL3-210ENST00000453030 PORCNQ9H237 461 aa14.23□□□□□ -0.13
GARNL3-210ENST00000453030 CWC22Q9HCG8 908 aaKnown RBP14.23□□□□□ -0.13
GARNL3-210ENST00000453030 EMILIN3Q9NT22 766 aa14.23□□□□□ -0.13
GARNL3-210ENST00000453030 STAP2Q9UGK3 403 aa14.23□□□□□ -0.13
GARNL3-210ENST00000453030 ZMYND8Q9ULU4 1186 aaPredicted RBP14.23□□□□□ -0.13
GARNL3-210ENST00000453030 ZKSCAN1P17029 563 aaPredicted RBP14.22□□□□□ -0.13
GARNL3-210ENST00000453030 MAPK4P31152 587 aa14.22□□□□□ -0.13
GARNL3-210ENST00000453030 MAP3K12Q12852 859 aa14.22□□□□□ -0.13
GARNL3-210ENST00000453030 RAB3GAP1Q15042 981 aa14.22□□□□□ -0.13
GARNL3-210ENST00000453030 USP17L2Q6R6M4 530 aa14.22□□□□□ -0.13
GARNL3-210ENST00000453030 RBPJLQ9UBG7 517 aa14.22□□□□□ -0.13
GARNL3-210ENST00000453030 SERPINB13Q9UIV8 391 aa14.22□□□□□ -0.13
GARNL3-210ENST00000453030 PARP14Q460N5 1801 aa14.22□□□□□ -0.13
GARNL3-210ENST00000453030 A0A0G2JMZ2 1700 aa14.21□□□□□ -0.13
GARNL3-210ENST00000453030 IGSF3O75054 1194 aa14.21□□□□□ -0.13
GARNL3-210ENST00000453030 MNX1P50219 401 aaPredicted RBP14.21□□□□□ -0.13
GARNL3-210ENST00000453030 CCL14Q16627 93 aa14.21□□□□□ -0.13
GARNL3-210ENST00000453030 Q3C1V9 767 aa14.21□□□□□ -0.13
GARNL3-210ENST00000453030 MAP3K21Q5TCX8 1036 aa14.21□□□□□ -0.13
GARNL3-210ENST00000453030 POTEEQ6S8J3 1075 aa14.21□□□□□ -0.13
GARNL3-210ENST00000453030 GPR142Q7Z601 462 aa14.21□□□□□ -0.13
GARNL3-210ENST00000453030 CERS3Q8IU89 383 aa14.21□□□□□ -0.13
GARNL3-210ENST00000453030 ERC1Q8IUD2 1116 aa14.21□□□□□ -0.13
GARNL3-210ENST00000453030 PANK1Q8TE04 598 aa14.21□□□□□ -0.13
GARNL3-210ENST00000453030 GTF3C2Q8WUA4 911 aaPredicted RBP14.21□□□□□ -0.13
GARNL3-210ENST00000453030 NBPF3Q9H094 633 aa14.21□□□□□ -0.13
GARNL3-210ENST00000453030 BCL11AQ9H165 835 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms