RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 MTMR2Q13614 643 aa14.33□□□□□ -0.12
HERC3-207ENST00000452979 NAA16Q6N069 864 aaPredicted RBP14.33□□□□□ -0.12
HERC3-207ENST00000452979 TRMT44Q8IYL2 757 aaKnown RBP14.33□□□□□ -0.12
HERC3-207ENST00000452979 USP6NLQ92738 828 aa14.33□□□□□ -0.12
HERC3-207ENST00000452979 LRCH3Q96II8 777 aa14.33□□□□□ -0.12
HERC3-207ENST00000452979 ZNF512BQ96KM6 892 aaPredicted RBP14.33□□□□□ -0.12
HERC3-207ENST00000452979 C11orf49Q9H6J7 331 aa14.33□□□□□ -0.12
HERC3-207ENST00000452979 DNAJC18Q9H819 358 aa14.33□□□□□ -0.12
HERC3-207ENST00000452979 TXNRD2Q9NNW7 524 aa14.33□□□□□ -0.12
HERC3-207ENST00000452979 AATFQ9NY61 560 aaKnown RBP eCLIP14.33□□□□□ -0.12
HERC3-207ENST00000452979 TMOD4Q9NZQ9 345 aa14.33□□□□□ -0.12
HERC3-207ENST00000452979 RBPJLQ9UBG7 517 aa14.33□□□□□ -0.12
HERC3-207ENST00000452979 COL6A3P12111 3177 aa14.32□□□□□ -0.12
HERC3-207ENST00000452979 USP17L10C9JJH3 530 aa14.32□□□□□ -0.12
HERC3-207ENST00000452979 TRIM27P14373 513 aa14.32□□□□□ -0.12
HERC3-207ENST00000452979 CYP2B6P20813 491 aa14.32□□□□□ -0.12
HERC3-207ENST00000452979 IRX3P78415 501 aaPredicted RBP14.32□□□□□ -0.12
HERC3-207ENST00000452979 ADGRA1Q86SQ6 560 aa14.32□□□□□ -0.12
HERC3-207ENST00000452979 C7orf61Q8IZ16 206 aa14.32□□□□□ -0.12
HERC3-207ENST00000452979 SLC17A8Q8NDX2 589 aa14.32□□□□□ -0.12
HERC3-207ENST00000452979 TGFBRAP1Q8WUH2 860 aa14.32□□□□□ -0.12
HERC3-207ENST00000452979 SOCS4Q8WXH5 440 aa14.32□□□□□ -0.12
HERC3-207ENST00000452979 YTHDC1Q96MU7 727 aaKnown RBP14.32□□□□□ -0.12
HERC3-207ENST00000452979 NUDT12Q9BQG2 462 aa14.32□□□□□ -0.12
HERC3-207ENST00000452979 FLT1P17948 1338 aa14.32□□□□□ -0.12
HERC3-207ENST00000452979 CYP2E1P05181 493 aaPredicted RBP14.31□□□□□ -0.12
HERC3-207ENST00000452979 COL6A1P12109 1028 aa14.31□□□□□ -0.12
HERC3-207ENST00000452979 PRKAR2AP13861 404 aaKnown RBP14.31□□□□□ -0.12
HERC3-207ENST00000452979 MAPK4P31152 587 aa14.31□□□□□ -0.12
HERC3-207ENST00000452979 POLA2Q14181 598 aa14.31□□□□□ -0.12
HERC3-207ENST00000452979 Q3C1V9 767 aa14.31□□□□□ -0.12
HERC3-207ENST00000452979 TNNI3KQ59H18 835 aa14.31□□□□□ -0.12
HERC3-207ENST00000452979 CCDC158Q5M9N0 1113 aa14.31□□□□□ -0.12
HERC3-207ENST00000452979 POTEEQ6S8J3 1075 aa14.31□□□□□ -0.12
HERC3-207ENST00000452979 ATF7IPQ6VMQ6 1270 aa14.31□□□□□ -0.12
HERC3-207ENST00000452979 MAPKAPK5Q8IW41 473 aa14.31□□□□□ -0.12
HERC3-207ENST00000452979 SNRKQ9NRH2 765 aa14.31□□□□□ -0.12
HERC3-207ENST00000452979 EMILIN3Q9NT22 766 aa14.31□□□□□ -0.12
HERC3-207ENST00000452979 ZBTB21Q9ULJ3 1066 aa14.31□□□□□ -0.12
HERC3-207ENST00000452979 FPGT-TNNI3KV9GXZ4 949 aa14.31□□□□□ -0.12
HERC3-207ENST00000452979 PEX10O60683 326 aa14.3□□□□□ -0.12
HERC3-207ENST00000452979 ERVK-9P63128 1117 aa14.3□□□□□ -0.12
HERC3-207ENST00000452979 ERVK-24P63145 666 aa14.3□□□□□ -0.12
HERC3-207ENST00000452979 LRIT3Q3SXY7 679 aa14.3□□□□□ -0.12
HERC3-207ENST00000452979 TTC39AQ5SRH9 613 aa14.3□□□□□ -0.12
HERC3-207ENST00000452979 MORN1Q5T089 497 aa14.3□□□□□ -0.12
HERC3-207ENST00000452979 LHX8Q68G74 356 aa14.3□□□□□ -0.12
HERC3-207ENST00000452979 SSH3Q8TE77 659 aa14.3□□□□□ -0.12
HERC3-207ENST00000452979 GTF3C2Q8WUA4 911 aaPredicted RBP14.3□□□□□ -0.12
HERC3-207ENST00000452979 DBNDD2Q9BQY9 259 aa14.3□□□□□ -0.12
HERC3-207ENST00000452979 PALD1Q9ULE6 856 aa14.3□□□□□ -0.12
HERC3-207ENST00000452979 ZMYND8Q9ULU4 1186 aaPredicted RBP14.3□□□□□ -0.12
HERC3-207ENST00000452979 ZBED9Q6R2W3 1325 aa14.3□□□□□ -0.12
HERC3-207ENST00000452979 MYH1P12882 1939 aa14.29□□□□□ -0.12
HERC3-207ENST00000452979 DLL1O00548 723 aa14.29□□□□□ -0.12
HERC3-207ENST00000452979 CACNB2Q08289 660 aaPredicted RBP14.29□□□□□ -0.12
HERC3-207ENST00000452979 SHROOM1Q2M3G4 852 aaPredicted RBP14.29□□□□□ -0.12
HERC3-207ENST00000452979 TATDN1Q6P1N9 297 aa14.29□□□□□ -0.12
HERC3-207ENST00000452979 CRACR2BQ8N4Y2 399 aaPredicted RBP14.29□□□□□ -0.12
HERC3-207ENST00000452979 TNNQ9UQP3 1299 aa14.29□□□□□ -0.12
HERC3-207ENST00000452979 PFASO15067 1338 aa14.29□□□□□ -0.12
HERC3-207ENST00000452979 BCAR3O75815 825 aa14.28□□□□□ -0.12
HERC3-207ENST00000452979 GDF11O95390 407 aa14.28□□□□□ -0.12
HERC3-207ENST00000452979 SYN1P17600 705 aa14.28□□□□□ -0.12
HERC3-207ENST00000452979 RGS2P41220 211 aa14.28□□□□□ -0.12
HERC3-207ENST00000452979 MAGEA10P43363 369 aaPredicted RBP14.28□□□□□ -0.12
HERC3-207ENST00000452979 ATP8B2P98198 1209 aa14.28□□□□□ -0.12
HERC3-207ENST00000452979 PDE3AQ14432 1141 aa14.28□□□□□ -0.12
HERC3-207ENST00000452979 USP17L2Q6R6M4 530 aa14.28□□□□□ -0.12
HERC3-207ENST00000452979 GPR142Q7Z601 462 aa14.28□□□□□ -0.12
HERC3-207ENST00000452979 PLEKHH3Q7Z736 793 aa14.28□□□□□ -0.12
HERC3-207ENST00000452979 C12orf42Q96LP6 360 aa14.28□□□□□ -0.12
HERC3-207ENST00000452979 TRIM34Q9BYJ4 488 aa14.28□□□□□ -0.12
HERC3-207ENST00000452979 PORCNQ9H237 461 aa14.28□□□□□ -0.12
HERC3-207ENST00000452979 PIH1D3Q9NQM4 214 aaKnown RBP14.28□□□□□ -0.12
HERC3-207ENST00000452979 FRMPD3Q5JV73 1810 aa14.27□□□□□ -0.12
HERC3-207ENST00000452979 HLA-DOAP06340 250 aa14.27□□□□□ -0.13
HERC3-207ENST00000452979 ZKSCAN1P17029 563 aaPredicted RBP14.27□□□□□ -0.13
HERC3-207ENST00000452979 CCND3P30281 292 aaPredicted RBP14.27□□□□□ -0.13
HERC3-207ENST00000452979 ZAP70P43403 619 aa14.27□□□□□ -0.13
HERC3-207ENST00000452979 TDHQ8IZJ6 230 aa14.27□□□□□ -0.13
HERC3-207ENST00000452979 NOP58Q9Y2X3 529 aaKnown RBP14.27□□□□□ -0.13
HERC3-207ENST00000452979 RABGAP1Q9Y3P9 1069 aa14.27□□□□□ -0.13
HERC3-207ENST00000452979 USP17L15C9J2P7 530 aa14.26□□□□□ -0.13
HERC3-207ENST00000452979 USP17L13C9JLJ4 530 aa14.26□□□□□ -0.13
HERC3-207ENST00000452979 USP17L11C9JVI0 530 aa14.26□□□□□ -0.13
HERC3-207ENST00000452979 USP17L18D6R9N7 530 aa14.26□□□□□ -0.13
HERC3-207ENST00000452979 USP17L22D6RA61 530 aa14.26□□□□□ -0.13
HERC3-207ENST00000452979 USP17L17D6RBQ6 530 aa14.26□□□□□ -0.13
HERC3-207ENST00000452979 USP17L19D6RCP7 530 aa14.26□□□□□ -0.13
HERC3-207ENST00000452979 USP17L20D6RJB6 530 aa14.26□□□□□ -0.13
HERC3-207ENST00000452979 DYNLL1P63167 89 aaKnown RBP14.26□□□□□ -0.13
HERC3-207ENST00000452979 USP17L24Q0WX57 530 aa14.26□□□□□ -0.13
HERC3-207ENST00000452979 MAP2K5Q13163 448 aa14.26□□□□□ -0.13
HERC3-207ENST00000452979 CCL14Q16627 93 aa14.26□□□□□ -0.13
HERC3-207ENST00000452979 CERS3Q8IU89 383 aa14.26□□□□□ -0.13
HERC3-207ENST00000452979 CCAR1Q8IX12 1150 aaKnown RBP14.26□□□□□ -0.13
HERC3-207ENST00000452979 TMEM57Q8N5G2 664 aa14.26□□□□□ -0.13
HERC3-207ENST00000452979 FRAT1Q92837 279 aaPredicted RBP14.26□□□□□ -0.13
HERC3-207ENST00000452979 CLUAP1Q96AJ1 413 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms