RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 PLEKHH2Q8IVE3 1493 aa5.39□□□□□ -1.55
HMGB3P22-202ENST00000451823 KDM5DQ9BY66 1539 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 ZNF608Q9ULD9 1512 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 BIN1O00499 593 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 GPR182O15218 404 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 PAPLNO95428 1278 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 IGHA2P01877 340 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 PPP2R3AQ06190 1150 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 AOC3Q16853 763 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 KIF4BQ2VIQ3 1234 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 PRPF40BQ6NWY9 871 aaKnown RBP5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 TXNDC2Q86VQ3 553 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 WFDC3Q8IUB2 231 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 PI4K2BQ8TCG2 481 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 FRAT1Q92837 279 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 NLRP2Q9NX02 1062 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 AKAP2Q9Y2D5 859 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 CARMIL2Q6F5E8 1435 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 LAMC3Q9Y6N6 1575 aa5.38□□□□□ -1.55
HMGB3P22-202ENST00000451823 ADGBQ8N7X0 1667 aa5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 VIRMAQ69YN4 1812 aaKnown RBP5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 ZNF648Q5T619 568 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 PI16Q6UXB8 463 aa5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 ARHGAP27Q6ZUM4 889 aa5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 STK35Q8TDR2 534 aa5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 MISP3Q96FF7 219 aa5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 DUSP23Q9BVJ7 150 aa5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 KRT82Q9NSB4 513 aa5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 MBNL3Q9NUK0 354 aaKnown RBP5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 GPN3Q9UHW5 284 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 PCDHGC5Q9Y5F6 944 aa5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 U3KQE9 123 aa5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 CLASP1Q7Z460 1538 aa5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 CEP170Q5SW79 1584 aa5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 LAMC1P11047 1609 aa5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 CROCC2H7BZ55 1655 aa5.37□□□□□ -1.55
HMGB3P22-202ENST00000451823 RNASE1P07998 156 aaKnown RBP5.36□□□□□ -1.55
HMGB3P22-202ENST00000451823 FUT4P22083 530 aa5.36□□□□□ -1.55
HMGB3P22-202ENST00000451823 ARNTP27540 789 aa5.36□□□□□ -1.55
HMGB3P22-202ENST00000451823 JAG1P78504 1218 aa5.36□□□□□ -1.55
HMGB3P22-202ENST00000451823 PRKCQQ04759 706 aa5.36□□□□□ -1.55
HMGB3P22-202ENST00000451823 ZNF124Q15973 351 aa5.36□□□□□ -1.55
HMGB3P22-202ENST00000451823 MPRIPQ6WCQ1 1025 aa5.36□□□□□ -1.55
HMGB3P22-202ENST00000451823 ATG4DQ86TL0 474 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P22-202ENST00000451823 PDZD3Q86UT5 571 aa5.36□□□□□ -1.55
HMGB3P22-202ENST00000451823 HOMEZQ8IX15 550 aa5.36□□□□□ -1.55
HMGB3P22-202ENST00000451823 BCO2Q9BYV7 579 aa5.36□□□□□ -1.55
HMGB3P22-202ENST00000451823 PLAGL2Q9UPG8 496 aa5.36□□□□□ -1.55
HMGB3P22-202ENST00000451823 CDK13Q14004 1512 aaKnown RBP5.35□□□□□ -1.55
HMGB3P22-202ENST00000451823 PTPRGP23470 1445 aa5.35□□□□□ -1.55
HMGB3P22-202ENST00000451823 OXCT1P55809 520 aa5.35□□□□□ -1.55
HMGB3P22-202ENST00000451823 PLCB3Q01970 1234 aa5.35□□□□□ -1.55
HMGB3P22-202ENST00000451823 ZC3H12AQ5D1E8 599 aaKnown RBP5.35□□□□□ -1.55
HMGB3P22-202ENST00000451823 MAP1SQ66K74 1059 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P22-202ENST00000451823 NXPE4Q6UWF7 544 aa5.35□□□□□ -1.55
HMGB3P22-202ENST00000451823 DMRTB1Q96MA1 342 aa5.35□□□□□ -1.55
HMGB3P22-202ENST00000451823 RC3H2Q9HBD1 1191 aaKnown RBP5.35□□□□□ -1.55
HMGB3P22-202ENST00000451823 CBX8Q9HC52 389 aa5.35□□□□□ -1.55
HMGB3P22-202ENST00000451823 CSADQ9Y600 493 aa5.35□□□□□ -1.55
HMGB3P22-202ENST00000451823 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P22-202ENST00000451823 ADCY10Q96PN6 1610 aa5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 URB2Q14146 1524 aaKnown RBP5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 GPRASP1Q5JY77 1395 aa5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 USP19O94966 1318 aa5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 TMEM265A0A087WTH1 108 aa5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 IFI16Q16666 785 aaKnown RBP5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 NPM2Q86SE8 214 aaKnown RBP5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 SULF2Q8IWU5 870 aa5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 RNF214Q8ND24 703 aa5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 ISL2Q96A47 359 aa5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 HRASLS5Q96KN8 279 aa5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 HEXIM2Q96MH2 286 aaKnown RBP5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 CRBNQ96SW2 442 aa5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 RBCK1Q9BYM8 510 aa5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 ADAMTS6Q9UKP5 1117 aa5.34□□□□□ -1.55
HMGB3P22-202ENST00000451823 IQGAP2Q13576 1575 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 KIAA0586Q9BVV6 1533 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 NLRP1Q9C000 1473 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 ZNF521Q96K83 1311 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 FARP2O94887 1054 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 XRCC5P13010 732 aaKnown RBP5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 NME2P22392 152 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 CENPQQ7L2Z9 268 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 FAM214BQ7L5A3 538 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 C12orf40Q86WS4 652 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 TOP6BLQ8N6T0 577 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 GRIN3AQ8TCU5 1115 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 GPBAR1Q8TDU6 330 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 FAM168AQ92567 244 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 ALKBH8Q96BT7 664 aaKnown RBP5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 EMILIN2Q9BXX0 1053 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 MKNK2Q9HBH9 465 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 TARBP1Q13395 1621 aaKnown RBP5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 TRPM1Q7Z4N2 1603 aa5.33□□□□□ -1.56
HMGB3P22-202ENST00000451823 ABCC10Q5T3U5 1492 aa5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 SHANK2Q9UPX8 1470 aa5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 CCDC144AA2RUR9 1427 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms