RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 CTR9Q6PD62 1173 aa13.92□□□□□ -0.18
COL27A1-202ENST00000451716 FNBP4Q8N3X1 1017 aaPredicted RBP13.92□□□□□ -0.18
COL27A1-202ENST00000451716 KIAA1524Q8TCG1 905 aa13.92□□□□□ -0.18
COL27A1-202ENST00000451716 OXER1Q8TDS5 423 aa13.92□□□□□ -0.18
COL27A1-202ENST00000451716 GPR101Q96P66 508 aaPredicted RBP13.92□□□□□ -0.18
COL27A1-202ENST00000451716 MYH2Q9UKX2 1941 aa13.92□□□□□ -0.18
COL27A1-202ENST00000451716 CYP2D6P10635 497 aa13.92□□□□□ -0.18
COL27A1-202ENST00000451716 TM4SF1P30408 202 aa13.92□□□□□ -0.18
COL27A1-202ENST00000451716 SEC23AQ15436 765 aa13.92□□□□□ -0.18
COL27A1-202ENST00000451716 CEP57L1Q8IYX8 460 aa13.92□□□□□ -0.18
COL27A1-202ENST00000451716 BAZ2BQ9UIF8 2168 aaKnown RBP13.92□□□□□ -0.18
COL27A1-202ENST00000451716 CAVIN2O95810 425 aa13.91□□□□□ -0.18
COL27A1-202ENST00000451716 MMP1P03956 469 aa13.91□□□□□ -0.18
COL27A1-202ENST00000451716 RFC4P35249 363 aa13.91□□□□□ -0.18
COL27A1-202ENST00000451716 SYKP43405 635 aa13.91□□□□□ -0.18
COL27A1-202ENST00000451716 ARID5BQ14865 1188 aa13.91□□□□□ -0.18
COL27A1-202ENST00000451716 ZRSR1Q15695 479 aaKnown RBP13.91□□□□□ -0.18
COL27A1-202ENST00000451716 NOSTRINQ8IVI9 506 aa13.91□□□□□ -0.18
COL27A1-202ENST00000451716 TIAM2Q8IVF5 1701 aa13.91□□□□□ -0.18
COL27A1-202ENST00000451716 CASZ1Q86V15 1759 aa13.91□□□□□ -0.18
COL27A1-202ENST00000451716 ECM29Q5VYK3 1845 aa13.91□□□□□ -0.18
COL27A1-202ENST00000451716 STK36Q9NRP7 1315 aa13.91□□□□□ -0.18
COL27A1-202ENST00000451716 TOB1P50616 345 aaPredicted RBP13.91□□□□□ -0.18
COL27A1-202ENST00000451716 GRIN1Q05586 938 aa13.91□□□□□ -0.18
COL27A1-202ENST00000451716 FAM47AQ5JRC9 791 aa13.91□□□□□ -0.18
COL27A1-202ENST00000451716 ZSCAN10Q96SZ4 725 aaPredicted RBP13.91□□□□□ -0.18
COL27A1-202ENST00000451716 FAM196AQ6ZSG2 479 aa13.9□□□□□ -0.18
COL27A1-202ENST00000451716 TMTC2Q8N394 836 aa13.9□□□□□ -0.18
COL27A1-202ENST00000451716 SHISA4Q96DD7 197 aa13.9□□□□□ -0.18
COL27A1-202ENST00000451716 ANKIB1Q9P2G1 1089 aa13.9□□□□□ -0.18
COL27A1-202ENST00000451716 ANAPC4Q9UJX5 808 aa13.9□□□□□ -0.18
COL27A1-202ENST00000451716 BTAF1O14981 1849 aa13.9□□□□□ -0.18
COL27A1-202ENST00000451716 PLEKHA8P1O95397 391 aa13.9□□□□□ -0.18
COL27A1-202ENST00000451716 NFIXQ14938 502 aa13.9□□□□□ -0.18
COL27A1-202ENST00000451716 SAFBQ15424 915 aaKnown RBP eCLIP13.9□□□□□ -0.18
COL27A1-202ENST00000451716 IFIT1BQ5T764 474 aaKnown RBP13.9□□□□□ -0.18
COL27A1-202ENST00000451716 ZNF592Q92610 1267 aa13.9□□□□□ -0.18
COL27A1-202ENST00000451716 VPS54Q9P1Q0 977 aa13.9□□□□□ -0.18
COL27A1-202ENST00000451716 A0A1B0GUL6 1792 aa13.9□□□□□ -0.19
COL27A1-202ENST00000451716 DYNC1I1O14576 645 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 PNOCQ13519 176 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 WASF1Q92558 559 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 BRIP1Q9BX63 1249 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 CCDC196A0A1B0GTZ2 297 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 FAM205CA6NFA0 338 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 PPP6R2O75170 966 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 DEXIO95424 95 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 FILIP1Q7Z7B0 1213 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 CACTINQ8WUQ7 758 aaKnown RBP13.89□□□□□ -0.19
COL27A1-202ENST00000451716 ANKRD2Q9GZV1 360 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 DCP1AQ9NPI6 582 aaPredicted RBP13.89□□□□□ -0.19
COL27A1-202ENST00000451716 SPTLC3Q9NUV7 552 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 PCDHB6Q9Y5E3 794 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 TPM3P06753 285 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 LONRF3Q496Y0 759 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 TRAPPC3LQ5T215 181 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 JMYQ8N9B5 988 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
COL27A1-202ENST00000451716 V9GY48 417 aaPredicted RBP13.89□□□□□ -0.19
COL27A1-202ENST00000451716 MYH13Q9UKX3 1938 aa13.88□□□□□ -0.19
COL27A1-202ENST00000451716 SCN7AQ01118 1682 aa13.88□□□□□ -0.19
COL27A1-202ENST00000451716 FOXN1O15353 648 aa13.88□□□□□ -0.19
COL27A1-202ENST00000451716 IGSF3O75054 1194 aa13.88□□□□□ -0.19
COL27A1-202ENST00000451716 EP400NLQ6ZTU2 488 aa13.88□□□□□ -0.19
COL27A1-202ENST00000451716 NAT10Q9H0A0 1025 aaKnown RBP13.88□□□□□ -0.19
COL27A1-202ENST00000451716 CABP5Q9NP86 173 aa13.88□□□□□ -0.19
COL27A1-202ENST00000451716 HPSEQ9Y251 543 aa13.88□□□□□ -0.19
COL27A1-202ENST00000451716 GRIK5Q16478 980 aa13.88□□□□□ -0.19
COL27A1-202ENST00000451716 RESP18Q5W5W9 173 aa13.88□□□□□ -0.19
COL27A1-202ENST00000451716 SARM1Q6SZW1 724 aa13.88□□□□□ -0.19
COL27A1-202ENST00000451716 IQCA1Q86XH1 822 aa13.88□□□□□ -0.19
COL27A1-202ENST00000451716 PLCD4Q9BRC7 762 aa13.88□□□□□ -0.19
COL27A1-202ENST00000451716 EARS2Q5JPH6 523 aaKnown RBP13.87□□□□□ -0.19
COL27A1-202ENST00000451716 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.87□□□□□ -0.19
COL27A1-202ENST00000451716 CATIPQ7Z7H3 387 aa13.87□□□□□ -0.19
COL27A1-202ENST00000451716 DZIP1Q86YF9 867 aaKnown RBP13.87□□□□□ -0.19
COL27A1-202ENST00000451716 TSC1Q92574 1164 aa13.87□□□□□ -0.19
COL27A1-202ENST00000451716 CRNKL1Q9BZJ0 848 aaKnown RBP13.87□□□□□ -0.19
COL27A1-202ENST00000451716 NID2Q14112 1375 aa13.87□□□□□ -0.19
COL27A1-202ENST00000451716 SEMA3EO15041 775 aa13.87□□□□□ -0.19
COL27A1-202ENST00000451716 USP17L8P0C7I0 530 aa13.87□□□□□ -0.19
COL27A1-202ENST00000451716 AKAP17AQ02040 695 aaKnown RBP13.87□□□□□ -0.19
COL27A1-202ENST00000451716 DIXDC1Q155Q3 683 aa13.87□□□□□ -0.19
COL27A1-202ENST00000451716 PKN1Q16512 942 aa13.87□□□□□ -0.19
COL27A1-202ENST00000451716 MEX3CQ5U5Q3 659 aaKnown RBP13.87□□□□□ -0.19
COL27A1-202ENST00000451716 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.87□□□□□ -0.19
COL27A1-202ENST00000451716 KCNH3Q9ULD8 1083 aa13.87□□□□□ -0.19
COL27A1-202ENST00000451716 NLRP12P59046 1061 aa13.86□□□□□ -0.19
COL27A1-202ENST00000451716 TROAPQ12815 778 aa13.86□□□□□ -0.19
COL27A1-202ENST00000451716 NOM1Q5C9Z4 860 aaKnown RBP13.86□□□□□ -0.19
COL27A1-202ENST00000451716 KRI1Q8N9T8 703 aaKnown RBP13.86□□□□□ -0.19
COL27A1-202ENST00000451716 MCM9Q9NXL9 1143 aa13.86□□□□□ -0.19
COL27A1-202ENST00000451716 FUT2Q10981 343 aa13.86□□□□□ -0.19
COL27A1-202ENST00000451716 FOXP4Q8IVH2 680 aaPredicted RBP13.86□□□□□ -0.19
COL27A1-202ENST00000451716 PDILTQ8N807 584 aa13.86□□□□□ -0.19
COL27A1-202ENST00000451716 CNBD1Q8NA66 436 aa13.86□□□□□ -0.19
COL27A1-202ENST00000451716 GJD4Q96KN9 370 aaPredicted RBP13.86□□□□□ -0.19
COL27A1-202ENST00000451716 MTA3Q9BTC8 594 aa13.86□□□□□ -0.19
COL27A1-202ENST00000451716 FOXP1Q9H334 677 aaPredicted RBP13.86□□□□□ -0.19
COL27A1-202ENST00000451716 CUTAO60888 179 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms