RNA–Protein interactions for RNA: ENST00000451506.5

PTPRN-209, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-209ENST00000451506 TTC39AQ5SRH9 613 aa20.97■□□□□ 0.95
PTPRN-209ENST00000451506 FOXP4Q8IVH2 680 aaPredicted RBP20.97■□□□□ 0.95
PTPRN-209ENST00000451506 FRAT1Q92837 279 aaPredicted RBP20.97■□□□□ 0.95
PTPRN-209ENST00000451506 TXNRD2Q9NNW7 524 aa20.97■□□□□ 0.95
PTPRN-209ENST00000451506 TMOD4Q9NZQ9 345 aa20.97■□□□□ 0.95
PTPRN-209ENST00000451506 C19orf81C9J6K1 198 aa20.96■□□□□ 0.95
PTPRN-209ENST00000451506 HERVK_113P62684 666 aa20.96■□□□□ 0.95
PTPRN-209ENST00000451506 CCDC158Q5M9N0 1113 aa20.96■□□□□ 0.95
PTPRN-209ENST00000451506 MAP3K21Q5TCX8 1036 aa20.96■□□□□ 0.95
PTPRN-209ENST00000451506 ZNF512BQ96KM6 892 aaPredicted RBP20.96■□□□□ 0.95
PTPRN-209ENST00000451506 GINM1Q9NU53 330 aa20.96■□□□□ 0.95
PTPRN-209ENST00000451506 PALD1Q9ULE6 856 aa20.96■□□□□ 0.95
PTPRN-209ENST00000451506 CDK5RAP2Q96SN8 1893 aa20.95■□□□□ 0.94
PTPRN-209ENST00000451506 USP17L10C9JJH3 530 aa20.95■□□□□ 0.94
PTPRN-209ENST00000451506 CYP2B6P20813 491 aa20.95■□□□□ 0.94
PTPRN-209ENST00000451506 TMEM57Q8N5G2 664 aa20.95■□□□□ 0.94
PTPRN-209ENST00000451506 GPRC5AQ8NFJ5 357 aa20.95■□□□□ 0.94
PTPRN-209ENST00000451506 SSH3Q8TE77 659 aa20.95■□□□□ 0.94
PTPRN-209ENST00000451506 GDF15Q99988 308 aa20.95■□□□□ 0.94
PTPRN-209ENST00000451506 NBPF3Q9H094 633 aa20.95■□□□□ 0.94
PTPRN-209ENST00000451506 RBPJLQ9UBG7 517 aa20.95■□□□□ 0.94
PTPRN-209ENST00000451506 OGDHLQ9ULD0 1010 aa20.95■□□□□ 0.94
PTPRN-209ENST00000451506 ZBTB21Q9ULJ3 1066 aa20.95■□□□□ 0.94
PTPRN-209ENST00000451506 FOCADQ5VW36 1801 aa20.94■□□□□ 0.94
PTPRN-209ENST00000451506 CCER2I3L3R5 266 aa20.94■□□□□ 0.94
PTPRN-209ENST00000451506 IGSF3O75054 1194 aa20.94■□□□□ 0.94
PTPRN-209ENST00000451506 GDF11O95390 407 aa20.94■□□□□ 0.94
PTPRN-209ENST00000451506 XRCC5P13010 732 aaKnown RBP20.94■□□□□ 0.94
PTPRN-209ENST00000451506 BMP8BP34820 402 aa20.94■□□□□ 0.94
PTPRN-209ENST00000451506 C7orf61Q8IZ16 206 aa20.94■□□□□ 0.94
PTPRN-209ENST00000451506 CRACR2BQ8N4Y2 399 aaPredicted RBP20.94■□□□□ 0.94
PTPRN-209ENST00000451506 LRCH3Q96II8 777 aa20.94■□□□□ 0.94
PTPRN-209ENST00000451506 PIH1D3Q9NQM4 214 aaKnown RBP20.94■□□□□ 0.94
PTPRN-209ENST00000451506 LAMA3Q16787 3333 aa20.94■□□□□ 0.94
PTPRN-209ENST00000451506 ZAP70P43403 619 aa20.93■□□□□ 0.94
PTPRN-209ENST00000451506 ATP8B2P98198 1209 aa20.93■□□□□ 0.94
PTPRN-209ENST00000451506 POTEEQ6S8J3 1075 aa20.93■□□□□ 0.94
PTPRN-209ENST00000451506 SOCS4Q8WXH5 440 aa20.93■□□□□ 0.94
PTPRN-209ENST00000451506 USP6NLQ92738 828 aa20.93■□□□□ 0.94
PTPRN-209ENST00000451506 NUDT12Q9BQG2 462 aa20.93■□□□□ 0.94
PTPRN-209ENST00000451506 EMILIN3Q9NT22 766 aa20.93■□□□□ 0.94
PTPRN-209ENST00000451506 DDX60LQ5H9U9 1706 aaKnown RBP20.92■□□□□ 0.94
PTPRN-209ENST00000451506 PRKAR2AP13861 404 aaKnown RBP20.92■□□□□ 0.94
PTPRN-209ENST00000451506 MAPK4P31152 587 aa20.92■□□□□ 0.94
PTPRN-209ENST00000451506 Q3C1V9 767 aa20.92■□□□□ 0.94
PTPRN-209ENST00000451506 TRIM34Q9BYJ4 488 aa20.92■□□□□ 0.94
PTPRN-209ENST00000451506 C11orf49Q9H6J7 331 aa20.92■□□□□ 0.94
PTPRN-209ENST00000451506 SAP30BPQ9UHR5 308 aaKnown RBP20.92■□□□□ 0.94
PTPRN-209ENST00000451506 ZMYND8Q9ULU4 1186 aaPredicted RBP20.92■□□□□ 0.94
PTPRN-209ENST00000451506 SURF6O75683 361 aaKnown RBP20.91■□□□□ 0.94
PTPRN-209ENST00000451506 ERVK-9P63128 1117 aa20.91■□□□□ 0.94
PTPRN-209ENST00000451506 ERVK-24P63145 666 aa20.91■□□□□ 0.94
PTPRN-209ENST00000451506 DYNLL1P63167 89 aaKnown RBP20.91■□□□□ 0.94
PTPRN-209ENST00000451506 OS9Q13438 667 aaPredicted RBP20.91■□□□□ 0.94
PTPRN-209ENST00000451506 PORCNQ9H237 461 aa20.91■□□□□ 0.94
PTPRN-209ENST00000451506 DBNLQ9UJU6 430 aaKnown RBP20.91■□□□□ 0.94
PTPRN-209ENST00000451506 MYO5AQ9Y4I1 1855 aaKnown RBP20.9■□□□□ 0.94
PTPRN-209ENST00000451506 PFASO15067 1338 aa20.9■□□□□ 0.94
PTPRN-209ENST00000451506 HLA-DOAP06340 250 aa20.9■□□□□ 0.94
PTPRN-209ENST00000451506 MORN1Q5T089 497 aa20.9■□□□□ 0.94
PTPRN-209ENST00000451506 ZKSCAN2Q63HK3 967 aa20.9■□□□□ 0.94
PTPRN-209ENST00000451506 TRMT44Q8IYL2 757 aaKnown RBP20.9■□□□□ 0.94
PTPRN-209ENST00000451506 GTF3C2Q8WUA4 911 aaPredicted RBP20.9■□□□□ 0.94
PTPRN-209ENST00000451506 NOP58Q9Y2X3 529 aaKnown RBP20.9■□□□□ 0.94
PTPRN-209ENST00000451506 ZKSCAN1P17029 563 aaPredicted RBP20.89■□□□□ 0.93
PTPRN-209ENST00000451506 CYP7A1P22680 504 aa20.89■□□□□ 0.93
PTPRN-209ENST00000451506 CACNB2Q08289 660 aaPredicted RBP20.89■□□□□ 0.93
PTPRN-209ENST00000451506 PDE3AQ14432 1141 aa20.89■□□□□ 0.93
PTPRN-209ENST00000451506 TATDN1Q6P1N9 297 aa20.89■□□□□ 0.93
PTPRN-209ENST00000451506 USP17L2Q6R6M4 530 aa20.89■□□□□ 0.93
PTPRN-209ENST00000451506 GPR142Q7Z601 462 aa20.89■□□□□ 0.93
PTPRN-209ENST00000451506 TLR7Q9NYK1 1049 aaKnown RBP20.89■□□□□ 0.93
PTPRN-209ENST00000451506 GH2P01242 217 aa20.88■□□□□ 0.93
PTPRN-209ENST00000451506 COL6A1P12109 1028 aa20.88■□□□□ 0.93
PTPRN-209ENST00000451506 SYN1P17600 705 aa20.88■□□□□ 0.93
PTPRN-209ENST00000451506 CCL14Q16627 93 aa20.88■□□□□ 0.93
PTPRN-209ENST00000451506 C12orf42Q96LP6 360 aa20.88■□□□□ 0.93
PTPRN-209ENST00000451506 PAGR1Q9BTK6 254 aa20.88■□□□□ 0.93
PTPRN-209ENST00000451506 C1orf115Q9H7X2 142 aa20.88■□□□□ 0.93
PTPRN-209ENST00000451506 RGS2P41220 211 aa20.87■□□□□ 0.93
PTPRN-209ENST00000451506 MAGEA10P43363 369 aaPredicted RBP20.87■□□□□ 0.93
PTPRN-209ENST00000451506 LHX8Q68G74 356 aa20.87■□□□□ 0.93
PTPRN-209ENST00000451506 PLEKHH3Q7Z736 793 aa20.87■□□□□ 0.93
PTPRN-209ENST00000451506 EAF2Q96CJ1 260 aaPredicted RBP20.87■□□□□ 0.93
PTPRN-209ENST00000451506 CCDC8Q9H0W5 538 aaPredicted RBP20.87■□□□□ 0.93
PTPRN-209ENST00000451506 CNMDO75829 334 aa20.86■□□□□ 0.93
PTPRN-209ENST00000451506 IDH1O75874 414 aaKnown RBP20.86■□□□□ 0.93
PTPRN-209ENST00000451506 CCND3P30281 292 aaPredicted RBP20.86■□□□□ 0.93
PTPRN-209ENST00000451506 GPR153Q6NV75 609 aa20.86■□□□□ 0.93
PTPRN-209ENST00000451506 CERS3Q8IU89 383 aa20.86■□□□□ 0.93
PTPRN-209ENST00000451506 CCAR1Q8IX12 1150 aaKnown RBP20.86■□□□□ 0.93
PTPRN-209ENST00000451506 MIGA1Q8NAN2 632 aa20.86■□□□□ 0.93
PTPRN-209ENST00000451506 APBA2Q99767 749 aa20.86■□□□□ 0.93
PTPRN-209ENST00000451506 EHD4Q9H223 541 aa20.86■□□□□ 0.93
PTPRN-209ENST00000451506 SLC17A8Q8NDX2 589 aa20.85■□□□□ 0.93
PTPRN-209ENST00000451506 SERPINB13Q9UIV8 391 aa20.85■□□□□ 0.93
PTPRN-209ENST00000451506 RABGAP1Q9Y3P9 1069 aa20.85■□□□□ 0.93
PTPRN-209ENST00000451506 COL6A3P12111 3177 aa20.84■□□□□ 0.93
PTPRN-209ENST00000451506 USP17L15C9J2P7 530 aa20.84■□□□□ 0.93
PTPRN-209ENST00000451506 USP17L13C9JLJ4 530 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms