RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 SH3D19Q5HYK7 790 aa26.58■■□□□ 1.85
CPSF7-208ENST00000450000 C20orf194Q5TEA3 1177 aa26.58■■□□□ 1.85
CPSF7-208ENST00000450000 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.58■■□□□ 1.854e-7■■■□□ 16.7
CPSF7-208ENST00000450000 TAOK2Q9UL54 1235 aa26.58■■□□□ 1.85
CPSF7-208ENST00000450000 SLAIN1Q8ND83 568 aa26.57■■□□□ 1.84
CPSF7-208ENST00000450000 DNAJC18Q9H819 358 aa26.57■■□□□ 1.84
CPSF7-208ENST00000450000 CABP5Q9NP86 173 aa26.57■■□□□ 1.84
CPSF7-208ENST00000450000 PAG1Q9NWQ8 432 aa26.57■■□□□ 1.84
CPSF7-208ENST00000450000 ZNF532Q9HCE3 1301 aa26.57■■□□□ 1.84
CPSF7-208ENST00000450000 FAM110CQ1W6H9 321 aa26.56■■□□□ 1.84
CPSF7-208ENST00000450000 FEZ1Q99689 392 aa26.56■■□□□ 1.84
CPSF7-208ENST00000450000 ASCC2Q9H1I8 757 aaPredicted RBP26.56■■□□□ 1.84
CPSF7-208ENST00000450000 EHD4Q9H223 541 aa26.56■■□□□ 1.84
CPSF7-208ENST00000450000 GH2P01242 217 aa26.55■■□□□ 1.84
CPSF7-208ENST00000450000 CERKLQ49MI3 558 aaPredicted RBP26.55■■□□□ 1.84
CPSF7-208ENST00000450000 MCM9Q9NXL9 1143 aa26.55■■□□□ 1.84
CPSF7-208ENST00000450000 ATP5JP18859 108 aa26.54■■□□□ 1.84
CPSF7-208ENST00000450000 FLT3LGP49771 235 aa26.54■■□□□ 1.84
CPSF7-208ENST00000450000 RAB3GAP1Q15042 981 aa26.54■■□□□ 1.84
CPSF7-208ENST00000450000 NKX2-3Q8TAU0 364 aa26.54■■□□□ 1.84
CPSF7-208ENST00000450000 RIOK1Q9BRS2 568 aaKnown RBP26.54■■□□□ 1.84
CPSF7-208ENST00000450000 GABRQQ9UN88 632 aa26.54■■□□□ 1.84
CPSF7-208ENST00000450000 ADCY3O60266 1144 aa26.53■■□□□ 1.84
CPSF7-208ENST00000450000 ABCB5Q2M3G0 1257 aa26.53■■□□□ 1.84
CPSF7-208ENST00000450000 USP17L2Q6R6M4 530 aa26.53■■□□□ 1.84
CPSF7-208ENST00000450000 CCAR1Q8IX12 1150 aaKnown RBP26.53■■□□□ 1.84
CPSF7-208ENST00000450000 AMOTL1Q8IY63 956 aa26.53■■□□□ 1.84
CPSF7-208ENST00000450000 DDRGK1Q96HY6 314 aa26.53■■□□□ 1.84
CPSF7-208ENST00000450000 GPATCH3Q96I76 525 aa26.53■■□□□ 1.84
CPSF7-208ENST00000450000 MTFR1Q15390 333 aa26.52■■□□□ 1.84
CPSF7-208ENST00000450000 ZSCAN25Q6NSZ9 544 aa26.52■■□□□ 1.84
CPSF7-208ENST00000450000 EDC3Q96F86 508 aaKnown RBP26.52■■□□□ 1.84
CPSF7-208ENST00000450000 RNF208Q9H0X6 261 aa26.52■■□□□ 1.84
CPSF7-208ENST00000450000 JAG1P78504 1218 aa26.51■■□□□ 1.83
CPSF7-208ENST00000450000 TATDN1Q6P1N9 297 aa26.51■■□□□ 1.83
CPSF7-208ENST00000450000 HAUS7Q99871 368 aa26.51■■□□□ 1.83
CPSF7-208ENST00000450000 ZSWIM8A7E2V4 1837 aa26.51■■□□□ 1.83
CPSF7-208ENST00000450000 MPHOSPH10O00566 681 aaKnown RBP26.5■■□□□ 1.83
CPSF7-208ENST00000450000 SMARCA5O60264 1052 aaPredicted RBP26.5■■□□□ 1.83
CPSF7-208ENST00000450000 CCL5P13501 91 aa26.5■■□□□ 1.83
CPSF7-208ENST00000450000 HOXA7P31268 230 aaPredicted RBP26.5■■□□□ 1.83
CPSF7-208ENST00000450000 USP14P54578 494 aa26.5■■□□□ 1.83
CPSF7-208ENST00000450000 PLCD1P51178 756 aa26.49■■□□□ 1.83
CPSF7-208ENST00000450000 ZYXQ15942 572 aaKnown RBP26.49■■□□□ 1.83
CPSF7-208ENST00000450000 SHROOM1Q2M3G4 852 aaPredicted RBP26.49■■□□□ 1.83
CPSF7-208ENST00000450000 LCORLQ8N3X6 602 aa26.49■■□□□ 1.83
CPSF7-208ENST00000450000 PXYLP1Q8TE99 480 aa26.49■■□□□ 1.83
CPSF7-208ENST00000450000 GTF3C2Q8WUA4 911 aaPredicted RBP26.49■■□□□ 1.83
CPSF7-208ENST00000450000 SDR42E1Q8WUS8 393 aa26.49■■□□□ 1.83
CPSF7-208ENST00000450000 ARMT1Q9H993 441 aa26.49■■□□□ 1.83
CPSF7-208ENST00000450000 CWC22Q9HCG8 908 aaKnown RBP26.49■■□□□ 1.83
CPSF7-208ENST00000450000 MYO5AQ9Y4I1 1855 aaKnown RBP26.49■■□□□ 1.83
CPSF7-208ENST00000450000 PHIPQ8WWQ0 1821 aa26.49■■□□□ 1.83
CPSF7-208ENST00000450000 ADD2P35612 726 aa26.48■■□□□ 1.83
CPSF7-208ENST00000450000 IRF5Q13568 498 aa26.48■■□□□ 1.83
CPSF7-208ENST00000450000 GPRC5AQ8NFJ5 357 aa26.48■■□□□ 1.83
CPSF7-208ENST00000450000 P2RX7Q99572 595 aaKnown RBP26.48■■□□□ 1.83
CPSF7-208ENST00000450000 PDE4DIPQ5VU43 2346 aa26.48■■□□□ 1.83
CPSF7-208ENST00000450000 TCRBV5S4A2TA0A5A2 114 aa26.47■■□□□ 1.83
CPSF7-208ENST00000450000 MBD4O95243 580 aa26.47■■□□□ 1.83
CPSF7-208ENST00000450000 ELNP15502 786 aa26.47■■□□□ 1.83
CPSF7-208ENST00000450000 HERVK_113P62684 666 aa26.47■■□□□ 1.83
CPSF7-208ENST00000450000 ECHDC1Q9NTX5 307 aa26.47■■□□□ 1.83
CPSF7-208ENST00000450000 ATAD5Q96QE3 1844 aa26.46■■□□□ 1.83
CPSF7-208ENST00000450000 GJB1P08034 283 aa26.46■■□□□ 1.83
CPSF7-208ENST00000450000 GCC1Q96CN9 775 aa26.46■■□□□ 1.83
CPSF7-208ENST00000450000 DCP1AQ9NPI6 582 aaPredicted RBP26.46■■□□□ 1.83
CPSF7-208ENST00000450000 EMILIN3Q9NT22 766 aa26.46■■□□□ 1.83
CPSF7-208ENST00000450000 KIAA0100Q14667 2235 aaKnown RBP26.46■■□□□ 1.83
CPSF7-208ENST00000450000 PTPRFP10586 1907 aa26.45■■□□□ 1.83
CPSF7-208ENST00000450000 INHAP05111 366 aa26.45■■□□□ 1.82
CPSF7-208ENST00000450000 PAGR1Q9BTK6 254 aa26.45■■□□□ 1.82
CPSF7-208ENST00000450000 ATP8A2Q9NTI2 1148 aa26.45■■□□□ 1.82
CPSF7-208ENST00000450000 MORF4L1Q9UBU8 362 aa26.45■■□□□ 1.82
CPSF7-208ENST00000450000 SWAP70Q9UH65 585 aa26.45■■□□□ 1.82
CPSF7-208ENST00000450000 FOCADQ5VW36 1801 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 USP17L15C9J2P7 530 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 USP17L13C9JLJ4 530 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 USP17L11C9JVI0 530 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 USP17L18D6R9N7 530 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 USP17L22D6RA61 530 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 USP17L17D6RBQ6 530 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 USP17L19D6RCP7 530 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 USP17L20D6RJB6 530 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 SHMT1P34896 483 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 USP17L24Q0WX57 530 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 UBE3CQ15386 1083 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 DCTPP1Q9H773 170 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 ZBTB47Q9UFB7 747 aaPredicted RBP26.44■■□□□ 1.82
CPSF7-208ENST00000450000 SIPA1L1O43166 1804 aa26.44■■□□□ 1.82
CPSF7-208ENST00000450000 GJA8P48165 433 aa26.43■■□□□ 1.82
CPSF7-208ENST00000450000 UNC93B1Q9H1C4 597 aa26.43■■□□□ 1.82
CPSF7-208ENST00000450000 MYH1P12882 1939 aa26.42■■□□□ 1.82
CPSF7-208ENST00000450000 MAPK4P31152 587 aa26.42■■□□□ 1.82
CPSF7-208ENST00000450000 KIAA1683Q9H0B3 1180 aa26.42■■□□□ 1.82
CPSF7-208ENST00000450000 SLC4A4Q9Y6R1 1079 aa26.42■■□□□ 1.82
CPSF7-208ENST00000450000 LOC285556D6RIA3 1793 aa26.42■■□□□ 1.82
CPSF7-208ENST00000450000 RBBP6Q7Z6E9 1792 aaKnown RBP26.42■■□□□ 1.82
CPSF7-208ENST00000450000 CDK5RAP2Q96SN8 1893 aa26.42■■□□□ 1.82
CPSF7-208ENST00000450000 PRKAB2O43741 272 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms