RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ZNF333Q96JL9 665 aa18.48■□□□□ 0.55
CHD3-205ENST00000449744 YTHDC1Q96MU7 727 aaKnown RBP18.48■□□□□ 0.55
CHD3-205ENST00000449744 HAUS7Q99871 368 aa18.48■□□□□ 0.55
CHD3-205ENST00000449744 EHD4Q9H223 541 aa18.48■□□□□ 0.55
CHD3-205ENST00000449744 DCTPP1Q9H773 170 aa18.48■□□□□ 0.55
CHD3-205ENST00000449744 ZBTB21Q9ULJ3 1066 aa18.48■□□□□ 0.55
CHD3-205ENST00000449744 MYPNQ86TC9 1320 aa18.48■□□□□ 0.55
CHD3-205ENST00000449744 MTMR2Q13614 643 aa18.47■□□□□ 0.55
CHD3-205ENST00000449744 PRPF38BQ5VTL8 546 aaKnown RBP18.47■□□□□ 0.55
CHD3-205ENST00000449744 TCRBV5S4A2TA0A5A2 114 aa18.46■□□□□ 0.55
CHD3-205ENST00000449744 POTEFA5A3E0 1075 aa18.46■□□□□ 0.55
CHD3-205ENST00000449744 C19orf81C9J6K1 198 aa18.46■□□□□ 0.55
CHD3-205ENST00000449744 USP17L10C9JJH3 530 aa18.46■□□□□ 0.55
CHD3-205ENST00000449744 ADD2P35612 726 aa18.46■□□□□ 0.55
CHD3-205ENST00000449744 RRP1P56182 461 aaKnown RBP18.46■□□□□ 0.55
CHD3-205ENST00000449744 BACE1P56817 501 aa18.46■□□□□ 0.55
CHD3-205ENST00000449744 JAG1P78504 1218 aa18.46■□□□□ 0.55
CHD3-205ENST00000449744 ANKRD13CQ8N6S4 541 aa18.46■□□□□ 0.55
CHD3-205ENST00000449744 SH3TC2Q8TF17 1288 aa18.46■□□□□ 0.55
CHD3-205ENST00000449744 GPATCH3Q96I76 525 aa18.46■□□□□ 0.55
CHD3-205ENST00000449744 ECHDC1Q9NTX5 307 aa18.46■□□□□ 0.55
CHD3-205ENST00000449744 MCM9Q9NXL9 1143 aa18.46■□□□□ 0.55
CHD3-205ENST00000449744 MYCP01106 439 aaPredicted RBP18.45■□□□□ 0.54
CHD3-205ENST00000449744 GH2P01242 217 aa18.45■□□□□ 0.54
CHD3-205ENST00000449744 GCLCP48506 637 aaPredicted RBP18.45■□□□□ 0.54
CHD3-205ENST00000449744 SHROOM1Q2M3G4 852 aaPredicted RBP18.45■□□□□ 0.54
CHD3-205ENST00000449744 CERKLQ49MI3 558 aaPredicted RBP18.45■□□□□ 0.54
CHD3-205ENST00000449744 ZSCAN25Q6NSZ9 544 aa18.45■□□□□ 0.54
CHD3-205ENST00000449744 TATDN1Q6P1N9 297 aa18.45■□□□□ 0.54
CHD3-205ENST00000449744 LCORLQ8N3X6 602 aa18.45■□□□□ 0.54
CHD3-205ENST00000449744 ARMT1Q9H993 441 aa18.45■□□□□ 0.54
CHD3-205ENST00000449744 CABP5Q9NP86 173 aa18.45■□□□□ 0.54
CHD3-205ENST00000449744 LOC285556D6RIA3 1793 aa18.45■□□□□ 0.54
CHD3-205ENST00000449744 TNPO2O14787 897 aaKnown RBP18.44■□□□□ 0.54
CHD3-205ENST00000449744 PLCD1P51178 756 aa18.44■□□□□ 0.54
CHD3-205ENST00000449744 IRX3P78415 501 aaPredicted RBP18.44■□□□□ 0.54
CHD3-205ENST00000449744 FAM110CQ1W6H9 321 aa18.44■□□□□ 0.54
CHD3-205ENST00000449744 SDR42E1Q8WUS8 393 aa18.44■□□□□ 0.54
CHD3-205ENST00000449744 FEZ1Q99689 392 aa18.44■□□□□ 0.54
CHD3-205ENST00000449744 ASCC2Q9H1I8 757 aaPredicted RBP18.44■□□□□ 0.54
CHD3-205ENST00000449744 MBD4O95243 580 aa18.43■□□□□ 0.54
CHD3-205ENST00000449744 GRK4P32298 578 aa18.43■□□□□ 0.54
CHD3-205ENST00000449744 PRKCZQ05513 592 aa18.43■□□□□ 0.54
CHD3-205ENST00000449744 RAB3GAP1Q15042 981 aa18.43■□□□□ 0.54
CHD3-205ENST00000449744 UBE3CQ15386 1083 aa18.43■□□□□ 0.54
CHD3-205ENST00000449744 ABCB5Q2M3G0 1257 aa18.43■□□□□ 0.54
CHD3-205ENST00000449744 DCP1AQ9NPI6 582 aaPredicted RBP18.43■□□□□ 0.54
CHD3-205ENST00000449744 NAV1Q8NEY1 1877 aa18.43■□□□□ 0.54
CHD3-205ENST00000449744 SLFNL1Q499Z3 407 aa18.42■□□□□ 0.54
CHD3-205ENST00000449744 USP17L2Q6R6M4 530 aa18.42■□□□□ 0.54
CHD3-205ENST00000449744 COA7Q96BR5 231 aa18.42■□□□□ 0.54
CHD3-205ENST00000449744 DDRGK1Q96HY6 314 aa18.42■□□□□ 0.54
CHD3-205ENST00000449744 BIN2Q9UBW5 565 aaPredicted RBP18.42■□□□□ 0.54
CHD3-205ENST00000449744 PCDHB15Q9Y5E8 787 aa18.42■□□□□ 0.54
CHD3-205ENST00000449744 MGAMO43451 1857 aa18.41■□□□□ 0.54
CHD3-205ENST00000449744 TNRC18O15417 2968 aaPredicted RBP18.41■□□□□ 0.54
CHD3-205ENST00000449744 EN2P19622 333 aaPredicted RBP18.41■□□□□ 0.54
CHD3-205ENST00000449744 HOXA7P31268 230 aaPredicted RBP18.41■□□□□ 0.54
CHD3-205ENST00000449744 SHMT1P34896 483 aa18.41■□□□□ 0.54
CHD3-205ENST00000449744 AMOTL1Q8IY63 956 aa18.41■□□□□ 0.54
CHD3-205ENST00000449744 ATP8A2Q9NTI2 1148 aa18.41■□□□□ 0.54
CHD3-205ENST00000449744 GABRQQ9UN88 632 aa18.41■□□□□ 0.54
CHD3-205ENST00000449744 RBBP6Q7Z6E9 1792 aaKnown RBP18.4■□□□□ 0.54
CHD3-205ENST00000449744 MPHOSPH10O00566 681 aaKnown RBP18.4■□□□□ 0.54
CHD3-205ENST00000449744 PRKAB2O43741 272 aa18.4■□□□□ 0.54
CHD3-205ENST00000449744 UBXN2AP68543 259 aa18.4■□□□□ 0.54
CHD3-205ENST00000449744 GABPAQ06546 454 aa18.4■□□□□ 0.54
CHD3-205ENST00000449744 ZYXQ15942 572 aaKnown RBP18.4■□□□□ 0.54
CHD3-205ENST00000449744 SLAIN1Q8ND83 568 aa18.4■□□□□ 0.54
CHD3-205ENST00000449744 CRBNQ96SW2 442 aa18.4■□□□□ 0.54
CHD3-205ENST00000449744 ZBTB47Q9UFB7 747 aaPredicted RBP18.4■□□□□ 0.54
CHD3-205ENST00000449744 DDX60LQ5H9U9 1706 aaKnown RBP18.4■□□□□ 0.54
CHD3-205ENST00000449744 CYP2D6P10635 497 aa18.39■□□□□ 0.53
CHD3-205ENST00000449744 FLT3LGP49771 235 aa18.39■□□□□ 0.53
CHD3-205ENST00000449744 USP14P54578 494 aa18.39■□□□□ 0.53
CHD3-205ENST00000449744 P2RX7Q99572 595 aaKnown RBP18.39■□□□□ 0.53
CHD3-205ENST00000449744 EMILIN3Q9NT22 766 aa18.39■□□□□ 0.53
CHD3-205ENST00000449744 SWAP70Q9UH65 585 aa18.39■□□□□ 0.53
CHD3-205ENST00000449744 TAOK2Q9UL54 1235 aa18.39■□□□□ 0.53
CHD3-205ENST00000449744 SLC4A4Q9Y6R1 1079 aa18.39■□□□□ 0.53
CHD3-205ENST00000449744 ADCY3O60266 1144 aa18.38■□□□□ 0.53
CHD3-205ENST00000449744 CHGBP05060 677 aa18.38■□□□□ 0.53
CHD3-205ENST00000449744 HERVK_113P62684 666 aa18.38■□□□□ 0.53
CHD3-205ENST00000449744 TSHZ3Q63HK5 1081 aa18.38■□□□□ 0.53
CHD3-205ENST00000449744 KBTBD3Q8NAB2 608 aa18.38■□□□□ 0.53
CHD3-205ENST00000449744 GTF3C2Q8WUA4 911 aaPredicted RBP18.38■□□□□ 0.53
CHD3-205ENST00000449744 C12orf42Q96LP6 360 aa18.38■□□□□ 0.53
CHD3-205ENST00000449744 PCDH10Q9P2E7 1040 aa18.38■□□□□ 0.53
CHD3-205ENST00000449744 KIAA0100Q14667 2235 aaKnown RBP18.38■□□□□ 0.53
CHD3-205ENST00000449744 MYH7P12883 1935 aa18.37■□□□□ 0.53
CHD3-205ENST00000449744 ERC2O15083 957 aa18.37■□□□□ 0.53
CHD3-205ENST00000449744 EVX2Q03828 476 aa18.37■□□□□ 0.53
CHD3-205ENST00000449744 IRF5Q13568 498 aa18.37■□□□□ 0.53
CHD3-205ENST00000449744 MTFR1Q15390 333 aa18.37■□□□□ 0.53
CHD3-205ENST00000449744 KIAA1683Q9H0B3 1180 aa18.37■□□□□ 0.53
CHD3-205ENST00000449744 PUS7LQ9H0K6 701 aaKnown RBP18.37■□□□□ 0.53
CHD3-205ENST00000449744 MORF4L1Q9UBU8 362 aa18.37■□□□□ 0.53
CHD3-205ENST00000449744 TTC41PQ6P2S7 1318 aa18.37■□□□□ 0.53
CHD3-205ENST00000449744 USP17L15C9J2P7 530 aa18.36■□□□□ 0.53
CHD3-205ENST00000449744 USP17L13C9JLJ4 530 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms