RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 IRF5Q13568 498 aa34.5■■■■□ 3.11
CBX4-202ENST00000448310 IL1RAPL2Q9NP60 686 aa34.5■■■■□ 3.11
CBX4-202ENST00000448310 HLA-DOAP06340 250 aa34.49■■■■□ 3.11
CBX4-202ENST00000448310 GCLCP48506 637 aaPredicted RBP34.49■■■■□ 3.11
CBX4-202ENST00000448310 BACE1P56817 501 aa34.49■■■■□ 3.11
CBX4-202ENST00000448310 PXYLP1Q8TE99 480 aa34.49■■■■□ 3.11
CBX4-202ENST00000448310 U2AF1L4Q8WU68 220 aaKnown RBP34.49■■■■□ 3.11
CBX4-202ENST00000448310 TMOD4Q9NZQ9 345 aa34.48■■■■□ 3.11
CBX4-202ENST00000448310 ZBTB21Q9ULJ3 1066 aa34.48■■■■□ 3.11
CBX4-202ENST00000448310 H0YGN5 161 aa34.47■■■■□ 3.11
CBX4-202ENST00000448310 USP5P45974 858 aa34.47■■■■□ 3.11
CBX4-202ENST00000448310 RHPN1Q8TCX5 695 aa34.46■■■■□ 3.11
CBX4-202ENST00000448310 APBB1O00213 710 aa34.45■■■■□ 3.11
CBX4-202ENST00000448310 IRX3P78415 501 aaPredicted RBP34.45■■■■□ 3.11
CBX4-202ENST00000448310 MAP3K12Q12852 859 aa34.45■■■■□ 3.11
CBX4-202ENST00000448310 UBE2Q1Q7Z7E8 422 aa34.45■■■■□ 3.11
CBX4-202ENST00000448310 COLQQ9Y215 455 aaPredicted RBP34.45■■■■□ 3.11
CBX4-202ENST00000448310 PLXNB2O15031 1838 aa34.44■■■■□ 3.1
CBX4-202ENST00000448310 PEX10O60683 326 aa34.44■■■■□ 3.1
CBX4-202ENST00000448310 DPF3Q92784 378 aa34.44■■■■□ 3.1
CBX4-202ENST00000448310 PCDH10Q9P2E7 1040 aa34.44■■■■□ 3.1
CBX4-202ENST00000448310 USP17L10C9JJH3 530 aa34.43■■■■□ 3.1
CBX4-202ENST00000448310 SGPL1O95470 568 aa34.43■■■■□ 3.1
CBX4-202ENST00000448310 P2RX7Q99572 595 aaKnown RBP34.43■■■■□ 3.1
CBX4-202ENST00000448310 GINM1Q9NU53 330 aa34.43■■■■□ 3.1
CBX4-202ENST00000448310 C19orf81C9J6K1 198 aa34.42■■■■□ 3.1
CBX4-202ENST00000448310 HSP90AB4PQ58FF6 505 aa34.42■■■■□ 3.1
CBX4-202ENST00000448310 BCL11AQ9H165 835 aa34.42■■■■□ 3.1
CBX4-202ENST00000448310 COG6Q9Y2V7 657 aa34.42■■■■□ 3.1
CBX4-202ENST00000448310 NAV1Q8NEY1 1877 aa34.41■■■■□ 3.1
CBX4-202ENST00000448310 FARP2O94887 1054 aaPredicted RBP34.41■■■■□ 3.1
CBX4-202ENST00000448310 GH2P01242 217 aa34.41■■■■□ 3.1
CBX4-202ENST00000448310 HOXA7P31268 230 aaPredicted RBP34.41■■■■□ 3.1
CBX4-202ENST00000448310 CERS3Q8IU89 383 aa34.41■■■■□ 3.1
CBX4-202ENST00000448310 DEFB118Q96PH6 123 aa34.41■■■■□ 3.1
CBX4-202ENST00000448310 MORF4L1Q9UBU8 362 aa34.41■■■■□ 3.1
CBX4-202ENST00000448310 MS4A1P11836 297 aa34.4■■■■□ 3.1
CBX4-202ENST00000448310 TXNRD2Q9NNW7 524 aa34.4■■■■□ 3.1
CBX4-202ENST00000448310 GJD2Q9UKL4 321 aa34.4■■■■□ 3.1
CBX4-202ENST00000448310 DDX60LQ5H9U9 1706 aaKnown RBP34.4■■■■□ 3.1
CBX4-202ENST00000448310 HERVK_113P62684 666 aa34.39■■■■□ 3.1
CBX4-202ENST00000448310 EMILIN3Q9NT22 766 aa34.39■■■■□ 3.1
CBX4-202ENST00000448310 TRIOBPQ9H2D6 2365 aa34.38■■■■□ 3.09
CBX4-202ENST00000448310 TATDN1Q6P1N9 297 aa34.38■■■■□ 3.09
CBX4-202ENST00000448310 SIRT2Q8IXJ6 389 aa34.38■■■■□ 3.09
CBX4-202ENST00000448310 RIOK1Q9BRS2 568 aaKnown RBP34.38■■■■□ 3.09
CBX4-202ENST00000448310 PAK6Q9NQU5 681 aaPredicted RBP34.38■■■■□ 3.09
CBX4-202ENST00000448310 SERPINB13Q9UIV8 391 aa34.38■■■■□ 3.09
CBX4-202ENST00000448310 TFRCP02786 760 aaKnown RBP34.37■■■■□ 3.09
CBX4-202ENST00000448310 RPAP2Q8IXW5 612 aaPredicted RBP34.37■■■■□ 3.09
CBX4-202ENST00000448310 CLASRPQ8N2M8 674 aaKnown RBP34.37■■■■□ 3.09
CBX4-202ENST00000448310 HTATIP2Q9BUP3 242 aa34.37■■■■□ 3.09
CBX4-202ENST00000448310 EHD4Q9H223 541 aa34.37■■■■□ 3.09
CBX4-202ENST00000448310 ZYXQ15942 572 aaKnown RBP34.36■■■■□ 3.09
CBX4-202ENST00000448310 KIF1BPQ96EK5 621 aa34.36■■■■□ 3.09
CBX4-202ENST00000448310 DNAJC2Q99543 621 aaKnown RBP34.36■■■■□ 3.09
CBX4-202ENST00000448310 ZBTB40Q9NUA8 1239 aa34.36■■■■□ 3.09
CBX4-202ENST00000448310 DDX19BQ9UMR2 479 aa34.36■■■■□ 3.09
CBX4-202ENST00000448310 MAGEB6P1A0A0J9YX57 407 aa34.35■■■■□ 3.09
CBX4-202ENST00000448310 PDE6AP16499 860 aa34.35■■■■□ 3.09
CBX4-202ENST00000448310 TRIM32Q13049 653 aa34.35■■■■□ 3.09
CBX4-202ENST00000448310 TTF1Q15361 905 aaPredicted RBP34.35■■■■□ 3.09
CBX4-202ENST00000448310 TMED8Q6PL24 325 aaPredicted RBP34.35■■■■□ 3.09
CBX4-202ENST00000448310 USP17L2Q6R6M4 530 aa34.35■■■■□ 3.09
CBX4-202ENST00000448310 TTC6Q86TZ1 520 aa34.35■■■■□ 3.09
CBX4-202ENST00000448310 GPRC5AQ8NFJ5 357 aa34.35■■■■□ 3.09
CBX4-202ENST00000448310 XRN2Q9H0D6 950 aaKnown RBP eCLIP34.35■■■■□ 3.094e-7■■■■□ 25.9
CBX4-202ENST00000448310 GOLIM4O00461 696 aa34.34■■■■□ 3.09
CBX4-202ENST00000448310 HMGCRP04035 888 aa34.34■■■■□ 3.09
CBX4-202ENST00000448310 IFIT2P09913 472 aaKnown RBP34.34■■■■□ 3.09
CBX4-202ENST00000448310 FXR1P51114 621 aaKnown RBP eCLIP34.34■■■■□ 3.09
CBX4-202ENST00000448310 PLCD1P51178 756 aa34.34■■■■□ 3.09
CBX4-202ENST00000448310 SLC9C2Q5TAH2 1124 aa34.34■■■■□ 3.09
CBX4-202ENST00000448310 FEZ1Q99689 392 aa34.34■■■■□ 3.09
CBX4-202ENST00000448310 RBPJLQ9UBG7 517 aa34.34■■■■□ 3.09
CBX4-202ENST00000448310 HMMRO75330 724 aa34.33■■■■□ 3.09
CBX4-202ENST00000448310 RAB3GAP1Q15042 981 aa34.33■■■■□ 3.09
CBX4-202ENST00000448310 CERKLQ49MI3 558 aaPredicted RBP34.33■■■■□ 3.09
CBX4-202ENST00000448310 CHRDL2Q6WN34 429 aa34.33■■■■□ 3.09
CBX4-202ENST00000448310 EDC3Q96F86 508 aaKnown RBP34.33■■■■□ 3.09
CBX4-202ENST00000448310 PAGR1Q9BTK6 254 aa34.33■■■■□ 3.09
CBX4-202ENST00000448310 CYP2B6P20813 491 aa34.32■■■■□ 3.08
CBX4-202ENST00000448310 EVX2Q03828 476 aa34.32■■■■□ 3.08
CBX4-202ENST00000448310 Q3C1V9 767 aa34.32■■■■□ 3.08
CBX4-202ENST00000448310 POTEEQ6S8J3 1075 aa34.32■■■■□ 3.08
CBX4-202ENST00000448310 CRISPLD2Q9H0B8 497 aa34.32■■■■□ 3.08
CBX4-202ENST00000448310 ZNF532Q9HCE3 1301 aa34.31■■■■□ 3.08
CBX4-202ENST00000448310 SHMT1P34896 483 aa34.31■■■■□ 3.08
CBX4-202ENST00000448310 ABCB5Q2M3G0 1257 aa34.31■■■■□ 3.08
CBX4-202ENST00000448310 TRIB2Q92519 343 aa34.31■■■■□ 3.08
CBX4-202ENST00000448310 ALPK3Q96L96 1907 aa34.31■■■■□ 3.08
CBX4-202ENST00000448310 POLR3DP05423 398 aaPredicted RBP34.3■■■■□ 3.08
CBX4-202ENST00000448310 ERVK-9P63128 1117 aa34.3■■■■□ 3.08
CBX4-202ENST00000448310 ERVK-24P63145 666 aa34.3■■■■□ 3.08
CBX4-202ENST00000448310 ACER1Q8TDN7 264 aa34.3■■■■□ 3.08
CBX4-202ENST00000448310 PPIL4Q8WUA2 492 aaKnown RBP eCLIP34.3■■■■□ 3.08
CBX4-202ENST00000448310 PORCNQ9H237 461 aa34.3■■■■□ 3.08
CBX4-202ENST00000448310 C12orf42Q96LP6 360 aa34.29■■■■□ 3.08
CBX4-202ENST00000448310 CRNKL1Q9BZJ0 848 aaKnown RBP34.29■■■■□ 3.08
CBX4-202ENST00000448310 TCRBV5S4A2TA0A5A2 114 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms