RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 POMGNT1Q8WZA1 660 aa9.85□□□□□ -0.83
NIPBL-202ENST00000448238 MIS12Q9H081 205 aa9.85□□□□□ -0.83
NIPBL-202ENST00000448238 TJAP1Q5JTD0 557 aa9.85□□□□□ -0.83
NIPBL-202ENST00000448238 HP1BP3Q5SSJ5 553 aaPredicted RBP9.85□□□□□ -0.83
NIPBL-202ENST00000448238 SCYL3Q8IZE3 742 aa9.85□□□□□ -0.83
NIPBL-202ENST00000448238 NCOA7Q8NI08 942 aa9.85□□□□□ -0.83
NIPBL-202ENST00000448238 RSAD2Q8WXG1 361 aa9.85□□□□□ -0.83
NIPBL-202ENST00000448238 MRPS27Q92552 414 aaKnown RBP9.85□□□□□ -0.83
NIPBL-202ENST00000448238 TUBGCP3Q96CW5 907 aa9.85□□□□□ -0.83
NIPBL-202ENST00000448238 RAD54L2Q9Y4B4 1467 aa9.85□□□□□ -0.83
NIPBL-202ENST00000448238 BCRP11274 1271 aa9.85□□□□□ -0.83
NIPBL-202ENST00000448238 TBC1D10BQ4KMP7 808 aaPredicted RBP9.85□□□□□ -0.83
NIPBL-202ENST00000448238 ACBD5Q5T8D3 534 aaPredicted RBP9.85□□□□□ -0.83
NIPBL-202ENST00000448238 CARD10Q9BWT7 1032 aa9.85□□□□□ -0.83
NIPBL-202ENST00000448238 ORC3Q9UBD5 711 aaPredicted RBP9.85□□□□□ -0.83
NIPBL-202ENST00000448238 H3BRJ5 948 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 KPNA2P52292 529 aaKnown RBP9.84□□□□□ -0.83
NIPBL-202ENST00000448238 ZSCAN23Q3MJ62 389 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 TLK2Q86UE8 772 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 TRIM59Q8IWR1 403 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 GOLGA8KD6RF30 607 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 DTNBO60941 627 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 HARSP12081 509 aaKnown RBP9.84□□□□□ -0.83
NIPBL-202ENST00000448238 POLE2P56282 527 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 GSTO1P78417 241 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 IQCB1Q15051 598 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 KRT79Q5XKE5 535 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 CCDC186Q7Z3E2 898 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 EFCAB13Q8IY85 973 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 CCDC105Q8IYK2 499 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 DTNBP1Q96EV8 351 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 MRPL40Q9NQ50 206 aaKnown RBP9.84□□□□□ -0.83
NIPBL-202ENST00000448238 KCNG1Q9UIX4 513 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 ANAPC5Q9UJX4 755 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 USP16Q9Y5T5 823 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 HGSO14964 777 aaPredicted RBP9.84□□□□□ -0.83
NIPBL-202ENST00000448238 SLC9C1Q4G0N8 1177 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 PRPF40BQ6NWY9 871 aaKnown RBP9.84□□□□□ -0.83
NIPBL-202ENST00000448238 NUMA1Q14980 2115 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 IPO5O00410 1097 aaKnown RBP9.84□□□□□ -0.83
NIPBL-202ENST00000448238 TNFAIP3P21580 790 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 AFMP43652 599 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 ZGPATQ8N5A5 531 aaKnown RBP9.84□□□□□ -0.83
NIPBL-202ENST00000448238 CLSTN2Q9H4D0 955 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 ZPR1O75312 459 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 ATL3Q6DD88 541 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 ISM2Q6H9L7 571 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 CSRNP1Q96S65 589 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 C1orf115Q9H7X2 142 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 MBD2Q9UBB5 411 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 SPDYE16A6NNV3 312 aaPredicted RBP9.84□□□□□ -0.83
NIPBL-202ENST00000448238 H0Y626 953 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 TRIM16O95361 564 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 HIF1AQ16665 826 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 SPDYE2Q495Y8 402 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 LRRC8CQ8TDW0 803 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 MYO18AQ92614 2054 aaKnown RBP9.84□□□□□ -0.83
NIPBL-202ENST00000448238 MICAL3Q7RTP6 2002 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 GJB2P29033 226 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 POLR2BP30876 1174 aaKnown RBP9.84□□□□□ -0.83
NIPBL-202ENST00000448238 CNGA2Q16280 664 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 SAAL1Q96ER3 474 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 RUNDC3BQ96NL0 473 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 SPZ1Q9BXG8 430 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 TRIM45Q9H8W5 580 aaPredicted RBP9.84□□□□□ -0.83
NIPBL-202ENST00000448238 SYTL2Q9HCH5 934 aa9.84□□□□□ -0.83
NIPBL-202ENST00000448238 NVLO15381 856 aaKnown RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 MTHFSP49914 203 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 IFIT5Q13325 482 aaKnown RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 BRDTQ58F21 947 aaPredicted RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 NLRP4Q96MN2 994 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 ING2Q9H160 280 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 KLHL31Q9H511 634 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 P4HA1P13674 534 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 TCF3P15923 654 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 HACE1Q8IYU2 909 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 SPDYE1Q8NFV5 336 aaPredicted RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 CEP70Q8NHQ1 597 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 ATP11BQ9Y2G3 1177 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 SNX5Q9Y5X3 404 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 KIF1CO43896 1103 aaKnown RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 ORC4O43929 436 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 GNA11P29992 359 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 TRIM71Q2Q1W2 868 aaKnown RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 GOLGA5Q8TBA6 731 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 MTBPQ96DY7 904 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 KIF2CQ99661 725 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 NBPF10Q6P3W6 841 aaKnown RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 SCYL1Q96KG9 808 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 JRKLQ9Y4A0 524 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 RASSF10A6NK89 507 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 DKC1O60832 514 aaKnown RBP eCLIP9.83□□□□□ -0.844e-9■□□□□ 10.7
NIPBL-202ENST00000448238 YWHAEP62258 255 aaKnown RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 RAD51AP2Q09MP3 1159 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 CCDC13Q8IYE1 715 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 OGFOD1Q8N543 542 aa9.83□□□□□ -0.84
NIPBL-202ENST00000448238 TRPC5Q9UL62 973 aaPredicted RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 PSDA5PKW4 1024 aaPredicted RBP9.83□□□□□ -0.84
NIPBL-202ENST00000448238 EIF3CLB5ME19 914 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms