RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 MYCP01106 439 aaPredicted RBP13.24□□□□□ -0.29
NPIPB3-202ENST00000448012 BCRP11274 1271 aa13.24□□□□□ -0.29
NPIPB3-202ENST00000448012 METTL16Q86W50 562 aaKnown RBP13.24□□□□□ -0.29
NPIPB3-202ENST00000448012 ANKRD13CQ8N6S4 541 aa13.24□□□□□ -0.29
NPIPB3-202ENST00000448012 ZNF333Q96JL9 665 aa13.24□□□□□ -0.29
NPIPB3-202ENST00000448012 EHD4Q9H223 541 aa13.24□□□□□ -0.29
NPIPB3-202ENST00000448012 MCM9Q9NXL9 1143 aa13.24□□□□□ -0.29
NPIPB3-202ENST00000448012 ZBTB21Q9ULJ3 1066 aa13.24□□□□□ -0.29
NPIPB3-202ENST00000448012 GH2P01242 217 aa13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 GRK4P32298 578 aa13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 BACE1P56817 501 aa13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 FAM110CQ1W6H9 321 aa13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 ABCB5Q2M3G0 1257 aa13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 LRRFIP1Q32MZ4 808 aaKnown RBP13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 CERKLQ49MI3 558 aaPredicted RBP13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 SH3D19Q5HYK7 790 aa13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 TREML2Q5T2D2 321 aa13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 SLAIN1Q8ND83 568 aa13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 SH3TC2Q8TF17 1288 aa13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 HAUS7Q99871 368 aa13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 ECHDC1Q9NTX5 307 aa13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 TAOK2Q9UL54 1235 aa13.23□□□□□ -0.29
NPIPB3-202ENST00000448012 POTEFA5A3E0 1075 aa13.22□□□□□ -0.29
NPIPB3-202ENST00000448012 USP14P54578 494 aa13.22□□□□□ -0.29
NPIPB3-202ENST00000448012 RAB3GAP1Q15042 981 aa13.22□□□□□ -0.29
NPIPB3-202ENST00000448012 USP17L2Q6R6M4 530 aa13.22□□□□□ -0.29
NPIPB3-202ENST00000448012 NKX2-3Q8TAU0 364 aa13.22□□□□□ -0.29
NPIPB3-202ENST00000448012 GTF3C2Q8WUA4 911 aaPredicted RBP13.22□□□□□ -0.29
NPIPB3-202ENST00000448012 RIOK1Q9BRS2 568 aaKnown RBP13.22□□□□□ -0.29
NPIPB3-202ENST00000448012 ASCC2Q9H1I8 757 aaPredicted RBP13.22□□□□□ -0.29
NPIPB3-202ENST00000448012 CWC22Q9HCG8 908 aaKnown RBP13.22□□□□□ -0.29
NPIPB3-202ENST00000448012 DOCK1Q14185 1865 aa13.21□□□□□ -0.29
NPIPB3-202ENST00000448012 MPHOSPH10O00566 681 aaKnown RBP13.21□□□□□ -0.29
NPIPB3-202ENST00000448012 SMARCA5O60264 1052 aaPredicted RBP13.21□□□□□ -0.29
NPIPB3-202ENST00000448012 MBD4O95243 580 aa13.21□□□□□ -0.29
NPIPB3-202ENST00000448012 CAP1Q01518 475 aa13.21□□□□□ -0.29
NPIPB3-202ENST00000448012 PRKCZQ05513 592 aa13.21□□□□□ -0.29
NPIPB3-202ENST00000448012 RRP1BQ14684 758 aaKnown RBP13.21□□□□□ -0.29
NPIPB3-202ENST00000448012 PRPF38BQ5VTL8 546 aaKnown RBP13.21□□□□□ -0.29
NPIPB3-202ENST00000448012 DNAJC18Q9H819 358 aa13.21□□□□□ -0.29
NPIPB3-202ENST00000448012 ATP8A2Q9NTI2 1148 aa13.21□□□□□ -0.29
NPIPB3-202ENST00000448012 ADCY3O60266 1144 aa13.2□□□□□ -0.3
NPIPB3-202ENST00000448012 EN2P19622 333 aaPredicted RBP13.2□□□□□ -0.3
NPIPB3-202ENST00000448012 ADD2P35612 726 aa13.2□□□□□ -0.3
NPIPB3-202ENST00000448012 FLT3LGP49771 235 aa13.2□□□□□ -0.3
NPIPB3-202ENST00000448012 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
NPIPB3-202ENST00000448012 TATDN1Q6P1N9 297 aa13.2□□□□□ -0.3
NPIPB3-202ENST00000448012 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
NPIPB3-202ENST00000448012 YTHDC1Q96MU7 727 aaKnown RBP13.2□□□□□ -0.3
NPIPB3-202ENST00000448012 DCTPP1Q9H773 170 aa13.2□□□□□ -0.3
NPIPB3-202ENST00000448012 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
NPIPB3-202ENST00000448012 SWAP70Q9UH65 585 aa13.2□□□□□ -0.3
NPIPB3-202ENST00000448012 ERC2O15083 957 aa13.19□□□□□ -0.3
NPIPB3-202ENST00000448012 HOXA7P31268 230 aaPredicted RBP13.19□□□□□ -0.3
NPIPB3-202ENST00000448012 RRP1P56182 461 aaKnown RBP13.19□□□□□ -0.3
NPIPB3-202ENST00000448012 ZYXQ15942 572 aaKnown RBP13.19□□□□□ -0.3
NPIPB3-202ENST00000448012 LCORLQ8N3X6 602 aa13.19□□□□□ -0.3
NPIPB3-202ENST00000448012 GPRC5AQ8NFJ5 357 aa13.19□□□□□ -0.3
NPIPB3-202ENST00000448012 SDR42E1Q8WUS8 393 aa13.19□□□□□ -0.3
NPIPB3-202ENST00000448012 DCP1AQ9NPI6 582 aaPredicted RBP13.19□□□□□ -0.3
NPIPB3-202ENST00000448012 TCRBV5S4A2TA0A5A2 114 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 USP17L15C9J2P7 530 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 ZFYP08048 801 aaPredicted RBP13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 CTGFP29279 349 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 PLCD1P51178 756 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 HERVK_113P62684 666 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 CCNA1P78396 465 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 USP17L24Q0WX57 530 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 IRF5Q13568 498 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 RNF208Q9H0X6 261 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 SH2D4AQ9H788 454 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 GABRQQ9UN88 632 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 SLC4A4Q9Y6R1 1079 aa13.18□□□□□ -0.3
NPIPB3-202ENST00000448012 GLRX3O76003 335 aaKnown RBP13.17□□□□□ -0.3
NPIPB3-202ENST00000448012 CCL5P13501 91 aa13.17□□□□□ -0.3
NPIPB3-202ENST00000448012 CAPN2P17655 700 aa13.17□□□□□ -0.3
NPIPB3-202ENST00000448012 TMEM179Q6ZVK1 233 aa13.17□□□□□ -0.3
NPIPB3-202ENST00000448012 PXYLP1Q8TE99 480 aa13.17□□□□□ -0.3
NPIPB3-202ENST00000448012 CCDC17Q96LX7 622 aa13.17□□□□□ -0.3
NPIPB3-202ENST00000448012 P2RX7Q99572 595 aaKnown RBP13.17□□□□□ -0.3
NPIPB3-202ENST00000448012 PAGR1Q9BTK6 254 aa13.17□□□□□ -0.3
NPIPB3-202ENST00000448012 KIAA1683Q9H0B3 1180 aa13.17□□□□□ -0.3
NPIPB3-202ENST00000448012 MORF4L1Q9UBU8 362 aa13.17□□□□□ -0.3
NPIPB3-202ENST00000448012 GJB1P08034 283 aa13.16□□□□□ -0.3
NPIPB3-202ENST00000448012 MAPK4P31152 587 aa13.16□□□□□ -0.3
NPIPB3-202ENST00000448012 SHMT1P34896 483 aa13.16□□□□□ -0.3
NPIPB3-202ENST00000448012 JAG1P78504 1218 aa13.16□□□□□ -0.3
NPIPB3-202ENST00000448012 KBTBD3Q8NAB2 608 aa13.16□□□□□ -0.3
NPIPB3-202ENST00000448012 SOCS4Q8WXH5 440 aa13.16□□□□□ -0.3
NPIPB3-202ENST00000448012 GCC1Q96CN9 775 aa13.16□□□□□ -0.3
NPIPB3-202ENST00000448012 C12orf42Q96LP6 360 aa13.16□□□□□ -0.3
NPIPB3-202ENST00000448012 ARHGEF10LQ9HCE6 1279 aa13.16□□□□□ -0.3
NPIPB3-202ENST00000448012 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms