RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 OPTNQ96CV9 577 aa16.95■□□□□ 0.3
SREBF1-207ENST00000447641 FAM227BQ96M60 508 aa16.95■□□□□ 0.3
SREBF1-207ENST00000447641 MCM9Q9NXL9 1143 aa16.95■□□□□ 0.3
SREBF1-207ENST00000447641 DOCK1Q14185 1865 aa16.95■□□□□ 0.3
SREBF1-207ENST00000447641 PATL2C9JE40 543 aaKnown RBP16.94■□□□□ 0.3
SREBF1-207ENST00000447641 FOXP2O15409 715 aa16.94■□□□□ 0.3
SREBF1-207ENST00000447641 CAP2P40123 477 aa16.94■□□□□ 0.3
SREBF1-207ENST00000447641 CRHR2Q13324 411 aa16.94■□□□□ 0.3
SREBF1-207ENST00000447641 SBK1Q52WX2 424 aa16.94■□□□□ 0.3
SREBF1-207ENST00000447641 C12orf60Q5U649 245 aa16.94■□□□□ 0.3
SREBF1-207ENST00000447641 TATDN1Q6P1N9 297 aa16.94■□□□□ 0.3
SREBF1-207ENST00000447641 CTR9Q6PD62 1173 aa16.94■□□□□ 0.3
SREBF1-207ENST00000447641 SCYL3Q8IZE3 742 aa16.94■□□□□ 0.3
SREBF1-207ENST00000447641 MS4A4AQ96JQ5 239 aa16.94■□□□□ 0.3
SREBF1-207ENST00000447641 PTPN18Q99952 460 aa16.94■□□□□ 0.3
SREBF1-207ENST00000447641 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.94■□□□□ 0.3
SREBF1-207ENST00000447641 SERPINB13Q9UIV8 391 aa16.94■□□□□ 0.3
SREBF1-207ENST00000447641 PTPN22Q9Y2R2 807 aa16.94■□□□□ 0.3
SREBF1-207ENST00000447641 PHIPQ8WWQ0 1821 aa16.93■□□□□ 0.3
SREBF1-207ENST00000447641 A0A0D9SFI3 127 aa16.93■□□□□ 0.3
SREBF1-207ENST00000447641 TESPA1A2RU30 521 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-207ENST00000447641 USP17L12C9JPN9 530 aa16.93■□□□□ 0.3
SREBF1-207ENST00000447641 USP17L21D6R901 530 aa16.93■□□□□ 0.3
SREBF1-207ENST00000447641 POLR3DP05423 398 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-207ENST00000447641 CYP2D6P10635 497 aa16.93■□□□□ 0.3
SREBF1-207ENST00000447641 EVX2Q03828 476 aa16.93■□□□□ 0.3
SREBF1-207ENST00000447641 PPATQ06203 517 aa16.93■□□□□ 0.3
SREBF1-207ENST00000447641 NMIQ13287 307 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-207ENST00000447641 MCMDC2Q4G0Z9 681 aa16.93■□□□□ 0.3
SREBF1-207ENST00000447641 EPB41L4AQ9HCS5 686 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-207ENST00000447641 ATAD5Q96QE3 1844 aa16.93■□□□□ 0.3
SREBF1-207ENST00000447641 PTPRAP18433 802 aa16.92■□□□□ 0.3
SREBF1-207ENST00000447641 FXR1P51114 621 aaKnown RBP eCLIP16.92■□□□□ 0.3
SREBF1-207ENST00000447641 INHBEP58166 350 aa16.92■□□□□ 0.3
SREBF1-207ENST00000447641 JAG1P78504 1218 aa16.92■□□□□ 0.3
SREBF1-207ENST00000447641 PPIL2Q13356 520 aa16.92■□□□□ 0.3
SREBF1-207ENST00000447641 SLC4A8Q2Y0W8 1093 aa16.92■□□□□ 0.3
SREBF1-207ENST00000447641 CRACR2BQ8N4Y2 399 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-207ENST00000447641 ARMC5Q96C12 935 aa16.92■□□□□ 0.3
SREBF1-207ENST00000447641 SMIM22K7EJ46 135 aa16.91■□□□□ 0.3
SREBF1-207ENST00000447641 HIP1O00291 1037 aa16.91■□□□□ 0.3
SREBF1-207ENST00000447641 IRF6O14896 467 aa16.91■□□□□ 0.3
SREBF1-207ENST00000447641 EN2P19622 333 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-207ENST00000447641 SHMT1P34896 483 aa16.91■□□□□ 0.3
SREBF1-207ENST00000447641 ALX1Q15699 326 aa16.91■□□□□ 0.3
SREBF1-207ENST00000447641 CCDC129Q6ZRS4 1044 aa16.91■□□□□ 0.3
SREBF1-207ENST00000447641 SKAP1Q86WV1 359 aa16.91■□□□□ 0.3
SREBF1-207ENST00000447641 IFNL3Q8IZI9 196 aa16.91■□□□□ 0.3
SREBF1-207ENST00000447641 OTUD5Q96G74 571 aa16.91■□□□□ 0.3
SREBF1-207ENST00000447641 DDRGK1Q96HY6 314 aa16.91■□□□□ 0.3
SREBF1-207ENST00000447641 GINM1Q9NU53 330 aa16.91■□□□□ 0.3
SREBF1-207ENST00000447641 KCNH4Q9UQ05 1017 aa16.91■□□□□ 0.3
SREBF1-207ENST00000447641 CYP2D7A0A087X1C5 515 aa16.9■□□□□ 0.3
SREBF1-207ENST00000447641 PICK1Q9NRD5 415 aa16.9■□□□□ 0.3
SREBF1-207ENST00000447641 ARPP21Q9UBL0 812 aaPredicted RBP16.9■□□□□ 0.3
SREBF1-207ENST00000447641 AFG3L2Q9Y4W6 797 aa16.9■□□□□ 0.3
SREBF1-207ENST00000447641 COL6A3P12111 3177 aa16.89■□□□□ 0.29
SREBF1-207ENST00000447641 CXCL11O14625 94 aa16.89■□□□□ 0.29
SREBF1-207ENST00000447641 GTF2A2P52657 109 aa16.89■□□□□ 0.29
SREBF1-207ENST00000447641 VPS53Q5VIR6 699 aa16.89■□□□□ 0.29
SREBF1-207ENST00000447641 C16orf86Q6ZW13 317 aa16.89■□□□□ 0.29
SREBF1-207ENST00000447641 ZNF589Q86UQ0 364 aaPredicted RBP16.89■□□□□ 0.29
SREBF1-207ENST00000447641 DYNLL2Q96FJ2 89 aa16.89■□□□□ 0.29
SREBF1-207ENST00000447641 ERO1AQ96HE7 468 aa16.89■□□□□ 0.29
SREBF1-207ENST00000447641 TRIM34Q9BYJ4 488 aa16.89■□□□□ 0.29
SREBF1-207ENST00000447641 SWAP70Q9UH65 585 aa16.89■□□□□ 0.29
SREBF1-207ENST00000447641 ZHX2Q9Y6X8 837 aa16.89■□□□□ 0.29
SREBF1-207ENST00000447641 PTPRFP10586 1907 aa16.89■□□□□ 0.29
SREBF1-207ENST00000447641 LAMA3Q16787 3333 aa16.89■□□□□ 0.29
SREBF1-207ENST00000447641 CEP290O15078 2479 aa16.88■□□□□ 0.29
SREBF1-207ENST00000447641 APPP05067 770 aa16.88■□□□□ 0.29
SREBF1-207ENST00000447641 ASNSP08243 561 aa16.88■□□□□ 0.29
SREBF1-207ENST00000447641 CHMLP26374 656 aa16.88■□□□□ 0.29
SREBF1-207ENST00000447641 SNAPC2Q13487 334 aa16.88■□□□□ 0.29
SREBF1-207ENST00000447641 MOGSQ13724 837 aa16.88■□□□□ 0.29
SREBF1-207ENST00000447641 SHROOM1Q2M3G4 852 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-207ENST00000447641 BRI3BPQ8WY22 251 aa16.88■□□□□ 0.29
SREBF1-207ENST00000447641 ZNF333Q96JL9 665 aa16.88■□□□□ 0.29
SREBF1-207ENST00000447641 TBC1D2Q9BYX2 928 aa16.88■□□□□ 0.29
SREBF1-207ENST00000447641 NACAP1Q9BZK3 213 aa16.88■□□□□ 0.29
SREBF1-207ENST00000447641 DIAPH3Q9NSV4 1193 aa16.88■□□□□ 0.29
SREBF1-207ENST00000447641 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-207ENST00000447641 CCDC171Q6TFL3 1326 aa16.88■□□□□ 0.29
SREBF1-207ENST00000447641 ROBO3Q96MS0 1386 aa16.88■□□□□ 0.29
SREBF1-207ENST00000447641 USP17L5A8MUK1 530 aa16.87■□□□□ 0.29
SREBF1-207ENST00000447641 HSPD1P10809 573 aaKnown RBP16.87■□□□□ 0.29
SREBF1-207ENST00000447641 CETPP11597 493 aa16.87■□□□□ 0.29
SREBF1-207ENST00000447641 CDK8P49336 464 aa16.87■□□□□ 0.29
SREBF1-207ENST00000447641 CERKLQ49MI3 558 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-207ENST00000447641 BMP2KLQ5H9B9 411 aa16.87■□□□□ 0.29
SREBF1-207ENST00000447641 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
SREBF1-207ENST00000447641 AMOTL1Q8IY63 956 aa16.87■□□□□ 0.29
SREBF1-207ENST00000447641 SLC44A5Q8NCS7 719 aa16.87■□□□□ 0.29
SREBF1-207ENST00000447641 WDR18Q9BV38 432 aa16.87■□□□□ 0.29
SREBF1-207ENST00000447641 EFCC1Q9HA90 598 aa16.87■□□□□ 0.29
SREBF1-207ENST00000447641 ZBTB21Q9ULJ3 1066 aa16.87■□□□□ 0.29
SREBF1-207ENST00000447641 MYH8P13535 1937 aa16.87■□□□□ 0.29
SREBF1-207ENST00000447641 GUCY1A2P33402 732 aa16.86■□□□□ 0.29
SREBF1-207ENST00000447641 TDO2P48775 406 aa16.86■□□□□ 0.29
SREBF1-207ENST00000447641 MFAP1P55081 439 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms