RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ZNF444Q8N0Y2 327 aaPredicted RBP11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 TBC1D22AQ8WUA7 517 aa11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 PIBF1Q8WXW3 757 aa11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 MASTLQ96GX5 879 aa11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 MKRN1Q9UHC7 482 aaKnown RBP11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 V9GY48 417 aaPredicted RBP11.02□□□□□ -0.64
COL6A4P1-201ENST00000446690 MYH13Q9UKX3 1938 aa11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 KINO60870 393 aaKnown RBP11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 YEATS4O95619 227 aa11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 CALM1P0DP23 149 aa11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 CALM2P0DP24 149 aa11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 CALM3P0DP25 149 aa11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 RCAN1P53805 252 aa11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 SLF2Q8IX21 1173 aa11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 SLC44A5Q8NCS7 719 aa11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 MXD3Q9BW11 206 aa11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 USP25Q9UHP3 1055 aa11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 MTMR7Q9Y216 660 aa11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 BAZ2AQ9UIF9 1905 aaKnown RBP11.02□□□□□ -0.65
COL6A4P1-201ENST00000446690 GPR75-ASB3A0A0A6YYF3 556 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 MMP1P03956 469 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 TSPY3P0CV98 308 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 TSPY8P0CW00 308 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 TROAPQ12815 778 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 SNW1Q13573 536 aaKnown RBP11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 PPP2R5BQ15173 497 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 EZH2Q15910 746 aaKnown RBP11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 UVSSAQ2YD98 709 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 C2CD5Q86YS7 1000 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 DIS3L2Q8IYB7 885 aaKnown RBP11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 CTCFLQ8NI51 663 aaPredicted RBP11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 MRPS27Q92552 414 aaKnown RBP11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 COA1Q9GZY4 146 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 DUOX1Q9NRD9 1551 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 NID2Q14112 1375 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 IGSF3O75054 1194 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 ATP2B1P20020 1258 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 U2AF2P26368 475 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 NDUFA8P51970 172 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 FAM160A1Q05DH4 1040 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 ANO6Q4KMQ2 910 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 KAT14Q9H8E8 782 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 RBM28Q9NW13 759 aaKnown RBP11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 VPS54Q9P1Q0 977 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 MRVI1Q9Y6F6 885 aa11.01□□□□□ -0.65
COL6A4P1-201ENST00000446690 CHD4Q14839 1912 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 USP17L3A6NCW0 530 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 USP17L4A6NCW7 530 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 H0YIN7 160 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 DDAH1O94760 285 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 XBP1P17861 261 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 NR5A1Q13285 461 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 PICALMQ13492 652 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 SLC39A14Q15043 492 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 POTEAQ6S8J7 498 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 USP17L1Q7RTZ2 530 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 NOSTRINQ8IVI9 506 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 RGS22Q8NE09 1264 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 ERCC4Q92889 916 aaPredicted RBP11□□□□□ -0.65
COL6A4P1-201ENST00000446690 SDF4Q9BRK5 362 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 RNF26Q9BY78 433 aaPredicted RBP11□□□□□ -0.65
COL6A4P1-201ENST00000446690 IL17RBQ9NRM6 502 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 WDHD1O75717 1129 aaPredicted RBP11□□□□□ -0.65
COL6A4P1-201ENST00000446690 PLCG2P16885 1265 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 CLCN1P35523 988 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 ENGASEQ8NFI3 743 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 OXER1Q8TDS5 423 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 PDLIM2Q96JY6 352 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 ZMYND15Q9H091 742 aa11□□□□□ -0.65
COL6A4P1-201ENST00000446690 RGS17Q9UGC6 210 aaPredicted RBP11□□□□□ -0.65
COL6A4P1-201ENST00000446690 A0A1W2PQ27 194 aa10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 A0A1W2PQ64 194 aa10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 A0A1W2PQD8 194 aa10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 ESPNB1AK53 854 aa10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 PRPF3O43395 683 aaKnown RBP10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 PTMAP06454 111 aaKnown RBP10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 CHRNA5P30532 468 aa10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 SCNN1DP51172 638 aa10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 LUZP1Q86V48 1076 aa10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 CERS3Q8IU89 383 aa10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 SRBD1Q8N5C6 995 aaKnown RBP10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 NAP1L5Q96NT1 182 aaPredicted RBP10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 DBNDD1Q9H9R9 158 aa10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 STX8Q9UNK0 236 aa10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 TTF2Q9UNY4 1162 aaKnown RBP10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 FLT1P17948 1338 aa10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 FAM205AQ6ZU69 1335 aa10.99□□□□□ -0.65
COL6A4P1-201ENST00000446690 CTAGE5O15320 804 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 ADCY5O95622 1261 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 RHBDL3P58872 404 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 SLC15A2Q16348 729 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 PKN1Q16512 942 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 RCSD1Q6JBY9 416 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 TMTC3Q6ZXV5 915 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 FMR1NBQ8N0W7 255 aaPredicted RBP10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 CERS5Q8N5B7 392 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 MAP3K14Q99558 947 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 DNAJC25Q9H1X3 360 aa10.98□□□□□ -0.65
COL6A4P1-201ENST00000446690 FOXP1Q9H334 677 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms