RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZAR1Q86SH2 424 aa6.98□□□□□ -1.29
HMGB1P48-201ENST00000446155 SLFN12Q8IYM2 578 aa6.98□□□□□ -1.29
HMGB1P48-201ENST00000446155 SHISA5Q8N114 240 aa6.98□□□□□ -1.29
HMGB1P48-201ENST00000446155 RBBP8NLQ8NC74 664 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P48-201ENST00000446155 FOXQ1Q9C009 403 aa6.98□□□□□ -1.29
HMGB1P48-201ENST00000446155 PPT2Q9UMR5 302 aa6.98□□□□□ -1.29
HMGB1P48-201ENST00000446155 SLC22A31A6NKX4 558 aa6.97□□□□□ -1.29
HMGB1P48-201ENST00000446155 LRIG2O94898 1065 aa6.97□□□□□ -1.29
HMGB1P48-201ENST00000446155 FSTP19883 344 aa6.97□□□□□ -1.29
HMGB1P48-201ENST00000446155 MCM4P33991 863 aa6.97□□□□□ -1.29
HMGB1P48-201ENST00000446155 NFIAQ12857 509 aa6.97□□□□□ -1.29
HMGB1P48-201ENST00000446155 CDK5R2Q13319 367 aa6.97□□□□□ -1.29
HMGB1P48-201ENST00000446155 GNL2Q13823 731 aaKnown RBP6.97□□□□□ -1.29
HMGB1P48-201ENST00000446155 PRAMEF13Q5VWM6 474 aa6.97□□□□□ -1.29
HMGB1P48-201ENST00000446155 MCF2L2Q86YR7 1114 aa6.97□□□□□ -1.29
HMGB1P48-201ENST00000446155 DBNDD2Q9BQY9 259 aa6.97□□□□□ -1.29
HMGB1P48-201ENST00000446155 ANTXR1Q9H6X2 564 aa6.97□□□□□ -1.29
HMGB1P48-201ENST00000446155 GMIPQ9P107 970 aa6.97□□□□□ -1.29
HMGB1P48-201ENST00000446155 UPK3BL1B0FP48 263 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 CHURC1-FNTBB4DL54 471 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 UPK3BL2E5RIL1 263 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 FURINP09958 794 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 IMPDH2P12268 514 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 ITGB7P26010 798 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 ARID5AQ03989 594 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 CDCP2Q5VXM1 449 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 OVOS1Q6IE37 1185 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 FAM214BQ7L5A3 538 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 TMEM40Q8WWA1 233 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 SHDQ96IW2 340 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 LGR6Q9HBX8 967 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 SSU72Q9NP77 194 aaKnown RBP6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 STRIP2Q9ULQ0 834 aa6.96□□□□□ -1.3
HMGB1P48-201ENST00000446155 GSC2O15499 205 aa6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 IGLV1-40P01703 118 aa6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 F13BP05160 661 aa6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 GIPRP48546 466 aa6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 LRRFIP1Q32MZ4 808 aaKnown RBP6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 SLC51AQ86UW1 340 aa6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 MFSD2AQ8NA29 543 aa6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 FAM13CQ8NE31 585 aa6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 ATG4CQ96DT6 458 aa6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 DPH2Q9BQC3 489 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 DUSP23Q9BVJ7 150 aa6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 SRRTQ9BXP5 876 aaKnown RBP6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 CNNM2Q9H8M5 875 aa6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 PRDM10Q9NQV6 1147 aa6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 COL17A1Q9UMD9 1497 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P48-201ENST00000446155 TNFRSF10CO14798 259 aa6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 LEFTY1O75610 366 aa6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 SLITRK5O94991 958 aa6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 YARSP54577 528 aaKnown RBP6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 OGFOD3Q6PK18 319 aa6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 CCDC81Q6ZN84 652 aa6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 LSRQ86X29 649 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 VPS37DQ86XT2 251 aa6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 TAB3Q8N5C8 712 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 DNAJB8Q8NHS0 232 aa6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 PPP1R13LQ8WUF5 828 aa6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 CYB5D2Q8WUJ1 264 aa6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 MFSD14AQ96MC6 490 aa6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 TBC1D32Q96NH3 1257 aa6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 FERD3LQ96RJ6 166 aa6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 KLHL3Q9UH77 587 aa6.94□□□□□ -1.3
HMGB1P48-201ENST00000446155 FAM170BA6NMN3 283 aa6.93□□□□□ -1.3
HMGB1P48-201ENST00000446155 EOMESO95936 686 aa6.93□□□□□ -1.3
HMGB1P48-201ENST00000446155 NME1P15531 152 aaKnown RBP6.93□□□□□ -1.3
HMGB1P48-201ENST00000446155 DNAJA1P31689 397 aaKnown RBP6.93□□□□□ -1.3
HMGB1P48-201ENST00000446155 MLECQ14165 292 aa6.93□□□□□ -1.3
HMGB1P48-201ENST00000446155 ARSHQ5FYA8 562 aa6.93□□□□□ -1.3
HMGB1P48-201ENST00000446155 ZDHHC13Q8IUH4 622 aa6.93□□□□□ -1.3
HMGB1P48-201ENST00000446155 TOP6BLQ8N6T0 577 aa6.93□□□□□ -1.3
HMGB1P48-201ENST00000446155 RGS13O14921 159 aa6.92□□□□□ -1.3
HMGB1P48-201ENST00000446155 FAM87AP0C7U9 286 aa6.92□□□□□ -1.3
HMGB1P48-201ENST00000446155 EIF6P56537 245 aaKnown RBP6.92□□□□□ -1.3
HMGB1P48-201ENST00000446155 LETMD1Q6P1Q0 360 aa6.92□□□□□ -1.3
HMGB1P48-201ENST00000446155 NLRC3Q7RTR2 1065 aa6.92□□□□□ -1.3
HMGB1P48-201ENST00000446155 FAM169BQ8N8A8 192 aa6.92□□□□□ -1.3
HMGB1P48-201ENST00000446155 SHKBP1Q8TBC3 707 aa6.92□□□□□ -1.3
HMGB1P48-201ENST00000446155 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.92□□□□□ -1.3
HMGB1P48-201ENST00000446155 USP35Q9P2H5 1018 aa6.92□□□□□ -1.3
HMGB1P48-201ENST00000446155 PRR19A6NJB7 356 aa6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 UBOX5O94941 541 aa6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 ACRP10323 421 aa6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 CPSF6Q16630 551 aaKnown RBP eCLIP6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 PRSS36Q5K4E3 855 aa6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 INTS3Q68E01 1043 aaKnown RBP6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 ZNF765Q7L2R6 523 aa6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 C19orf47Q8N9M1 422 aaKnown RBP6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 OR6P1Q8NGX9 317 aa6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 RIN3Q8TB24 985 aa6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 HEXIM2Q96MH2 286 aaKnown RBP6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 MIPEPQ99797 713 aa6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 TM9SF2Q99805 663 aa6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 SEMA6BQ9H3T3 888 aa6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 CNTNAP4Q9C0A0 1308 aa6.91□□□□□ -1.3
HMGB1P48-201ENST00000446155 WDR64B1ANS9 1081 aa6.9□□□□□ -1.3
HMGB1P48-201ENST00000446155 RUFY4Q6ZNE9 571 aa6.9□□□□□ -1.3
HMGB1P48-201ENST00000446155 FBXL6Q8N531 539 aa6.9□□□□□ -1.3
HMGB1P48-201ENST00000446155 GIMAP7Q8NHV1 300 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms