RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 C7orf61Q8IZ16 206 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 NKAPQ8N5F7 415 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 BICD2Q8TD16 824 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 FNIP1Q8TF40 1166 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 HDAC7Q8WUI4 952 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 CPLX3Q8WVH0 158 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 ANKRD49Q8WVL7 239 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 RSAD2Q8WXG1 361 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 CTNNBL1Q8WYA6 563 aaPredicted RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 CCT6BQ92526 530 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 HDAC2Q92769 488 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 ARHGEF2Q92974 986 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 RSRC1Q96IZ7 334 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 ZMAT2Q96NC0 199 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 NCAPGQ9BPX3 1015 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 ISCA1Q9BUE6 129 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 ASPSCR1Q9BZE9 553 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 LMAN2LQ9H0V9 348 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 ZWILCHQ9H900 591 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 FBRSQ9HAH7 460 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 ZSWIM6Q9HCJ5 1215 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 BRMS1Q9HCU9 246 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 TCF7L2Q9NQB0 619 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 SMYD2Q9NRG4 433 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 DNAAF2Q9NVR5 837 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 PIH1D1Q9NWS0 290 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 KCTD5Q9NXV2 234 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 TMOD4Q9NZQ9 345 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 STK26Q9P289 416 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 MTRRQ9UBK8 725 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 CFDP1Q9UEE9 299 aaPredicted RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 RCAN3Q9UKA8 241 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 DUSP12Q9UNI6 340 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 MAPRE3Q9UPY8 281 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 ITM2BQ9Y287 266 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 KIF3AQ9Y496 699 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 LRRFIP2Q9Y608 721 aaKnown RBP3.2□□□□□ -1.9
UBBP3-201ENST00000445497 SNCAIPQ9Y6H5 919 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 AK5Q9Y6K8 562 aa3.2□□□□□ -1.9
UBBP3-201ENST00000445497 GOLGA6L10A0A0M3HER8 536 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 MOXD2PA6NHM9 499 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 TTLL13PA6NNM8 815 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 VSTM5A8MXK1 200 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 H0YC42 278 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 M0QX08 132 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 STXBP3O00186 592 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 PIK3CDO00329 1044 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 PLOD2O00469 737 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 PDPK1O15530 556 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 MAFKO60675 156 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 KPNA6O60684 536 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 KRT38O76015 456 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 ASMTLO95671 621 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 AGR2O95994 175 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 CAPNS1P04632 268 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 TSPY4P0CV99 314 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 TSPY10P0CW01 314 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 HARSP12081 509 aaKnown RBP3.19□□□□□ -1.9
UBBP3-201ENST00000445497 MYCLP1P12525 358 aaPredicted RBP3.19□□□□□ -1.9
UBBP3-201ENST00000445497 SKILP12757 684 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 CD44P16070 742 aaKnown RBP3.19□□□□□ -1.9
UBBP3-201ENST00000445497 POU3F3P20264 500 aaPredicted RBP3.19□□□□□ -1.9
UBBP3-201ENST00000445497 CD9P21926 228 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 ENPP1P22413 925 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 IL4RP24394 825 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 MZF1P28698 734 aaPredicted RBP3.19□□□□□ -1.9
UBBP3-201ENST00000445497 HOXD12P35452 270 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 KRT20P35900 424 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 SCNN1AP37088 669 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 NASPP49321 788 aaPredicted RBP3.19□□□□□ -1.9
UBBP3-201ENST00000445497 PDE6CP51160 858 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 PMS1P54277 932 aaKnown RBP3.19□□□□□ -1.9
UBBP3-201ENST00000445497 EVCP57679 992 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 CCDC173Q0VFZ6 552 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 SQSTM1Q13501 440 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 NCOA4Q13772 614 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 PPP2R5DQ14738 602 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 RABEP1Q15276 862 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 CLUL1Q15846 466 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 CNGA3Q16281 694 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 PKN2Q16513 984 aaKnown RBP3.19□□□□□ -1.9
UBBP3-201ENST00000445497 INF2Q27J81 1249 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 C11orf91Q3C1V1 193 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 MAP7D1Q3KQU3 841 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 AKAP4Q5JQC9 854 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 RRP12Q5JTH9 1297 aaKnown RBP3.19□□□□□ -1.9
UBBP3-201ENST00000445497 CFAP58Q5T655 872 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 VPS53Q5VIR6 699 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 LRCH2Q5VUJ6 765 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 KIAA0319Q5VV43 1072 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 AP1ARQ63HQ0 302 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 TMCO3Q6UWJ1 677 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 UNC5DQ6UXZ4 953 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 RASGRP2Q7LDG7 609 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.19□□□□□ -1.9
UBBP3-201ENST00000445497 GALNT5Q7Z7M9 940 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 NLRP13Q86W25 1043 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 SLC44A2Q8IWA5 706 aaPredicted RBP3.19□□□□□ -1.9
UBBP3-201ENST00000445497 COLGALT2Q8IYK4 626 aa3.19□□□□□ -1.9
UBBP3-201ENST00000445497 FAM186BQ8IYM0 893 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms