RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 TOMM22Q9NS69 142 aa21.27■■□□□ 1
CIRBP-203ENST00000444172 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.27■■□□□ 1
CIRBP-203ENST00000444172 ANAPC4Q9UJX5 808 aa21.27■■□□□ 1
CIRBP-203ENST00000444172 TAOK2Q9UL54 1235 aa21.27■■□□□ 1
CIRBP-203ENST00000444172 RBM8AQ9Y5S9 174 aaKnown RBP21.27■■□□□ 1
CIRBP-203ENST00000444172 DOCK1Q14185 1865 aa21.26■□□□□ 0.99
CIRBP-203ENST00000444172 ROBO3Q96MS0 1386 aa21.26■□□□□ 0.99
CIRBP-203ENST00000444172 ECE1P42892 770 aa21.26■□□□□ 0.99
CIRBP-203ENST00000444172 SHROOM1Q2M3G4 852 aaPredicted RBP21.26■□□□□ 0.99
CIRBP-203ENST00000444172 ZNF444Q8N0Y2 327 aaPredicted RBP21.26■□□□□ 0.99
CIRBP-203ENST00000444172 CNKSR2Q8WXI2 1034 aa21.26■□□□□ 0.99
CIRBP-203ENST00000444172 CCDC102AQ96A19 550 aa21.26■□□□□ 0.99
CIRBP-203ENST00000444172 OPTNQ96CV9 577 aa21.26■□□□□ 0.99
CIRBP-203ENST00000444172 OTUD5Q96G74 571 aa21.26■□□□□ 0.99
CIRBP-203ENST00000444172 CAPNS2Q96L46 248 aa21.26■□□□□ 0.99
CIRBP-203ENST00000444172 GH2P01242 217 aa21.25■□□□□ 0.99
CIRBP-203ENST00000444172 AKR1B1P15121 316 aa21.25■□□□□ 0.99
CIRBP-203ENST00000444172 PTPRAP18433 802 aa21.25■□□□□ 0.99
CIRBP-203ENST00000444172 JAG1P78504 1218 aa21.25■□□□□ 0.99
CIRBP-203ENST00000444172 ERO1BQ86YB8 467 aa21.25■□□□□ 0.99
CIRBP-203ENST00000444172 RASAL3Q86YV0 1011 aa21.25■□□□□ 0.99
CIRBP-203ENST00000444172 REC8O95072 547 aa21.24■□□□□ 0.99
CIRBP-203ENST00000444172 ASNSP08243 561 aa21.24■□□□□ 0.99
CIRBP-203ENST00000444172 SLC10A3P09131 477 aa21.24■□□□□ 0.99
CIRBP-203ENST00000444172 RAB3GAP1Q15042 981 aa21.24■□□□□ 0.99
CIRBP-203ENST00000444172 RRP12Q5JTH9 1297 aaKnown RBP21.24■□□□□ 0.99
CIRBP-203ENST00000444172 AKNAD1Q5T1N1 836 aa21.24■□□□□ 0.99
CIRBP-203ENST00000444172 MFSD6Q6ZSS7 791 aa21.24■□□□□ 0.99
CIRBP-203ENST00000444172 CCDC84Q86UT8 332 aaPredicted RBP21.24■□□□□ 0.99
CIRBP-203ENST00000444172 WNK4Q96J92 1243 aa21.24■□□□□ 0.99
CIRBP-203ENST00000444172 CCDC17Q96LX7 622 aa21.24■□□□□ 0.99
CIRBP-203ENST00000444172 ZBTB21Q9ULJ3 1066 aa21.24■□□□□ 0.99
CIRBP-203ENST00000444172 TACC3Q9Y6A5 838 aa21.24■□□□□ 0.99
CIRBP-203ENST00000444172 ZHX2Q9Y6X8 837 aa21.24■□□□□ 0.99
CIRBP-203ENST00000444172 WDR33Q9C0J8 1336 aaKnown RBP21.24■□□□□ 0.99
CIRBP-203ENST00000444172 LAMA4Q16363 1823 aa21.23■□□□□ 0.99
CIRBP-203ENST00000444172 SPDYE5A6NIY4 337 aa21.23■□□□□ 0.99
CIRBP-203ENST00000444172 USP17L5A8MUK1 530 aa21.23■□□□□ 0.99
CIRBP-203ENST00000444172 RASA1P20936 1047 aa21.23■□□□□ 0.99
CIRBP-203ENST00000444172 VEGFBP49765 207 aa21.23■□□□□ 0.99
CIRBP-203ENST00000444172 PPATQ06203 517 aa21.23■□□□□ 0.99
CIRBP-203ENST00000444172 SPRYD7Q5W111 196 aa21.23■□□□□ 0.99
CIRBP-203ENST00000444172 NBPF3Q9H094 633 aa21.23■□□□□ 0.99
CIRBP-203ENST00000444172 GINM1Q9NU53 330 aa21.23■□□□□ 0.99
CIRBP-203ENST00000444172 FAM155AB1AL88 458 aaPredicted RBP21.22■□□□□ 0.99
CIRBP-203ENST00000444172 CYP21A2P08686 494 aa21.22■□□□□ 0.99
CIRBP-203ENST00000444172 GJA5P36382 358 aa21.22■□□□□ 0.99
CIRBP-203ENST00000444172 SEPT2Q15019 361 aa21.22■□□□□ 0.99
CIRBP-203ENST00000444172 FAM47AQ5JRC9 791 aa21.22■□□□□ 0.99
CIRBP-203ENST00000444172 TBC1D10CQ8IV04 446 aa21.22■□□□□ 0.99
CIRBP-203ENST00000444172 STAG1Q8WVM7 1258 aa21.22■□□□□ 0.99
CIRBP-203ENST00000444172 RNF41Q9H4P4 317 aaPredicted RBP21.22■□□□□ 0.99
CIRBP-203ENST00000444172 RANBP6O60518 1105 aaKnown RBP21.21■□□□□ 0.99
CIRBP-203ENST00000444172 AOC2O75106 756 aa21.21■□□□□ 0.99
CIRBP-203ENST00000444172 TSPY3P0CV98 308 aa21.21■□□□□ 0.99
CIRBP-203ENST00000444172 TSPY8P0CW00 308 aa21.21■□□□□ 0.99
CIRBP-203ENST00000444172 TFAP4Q01664 338 aa21.21■□□□□ 0.99
CIRBP-203ENST00000444172 TMEM179Q6ZVK1 233 aa21.21■□□□□ 0.99
CIRBP-203ENST00000444172 AS3MTQ9HBK9 375 aa21.21■□□□□ 0.99
CIRBP-203ENST00000444172 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.21■□□□□ 0.99
CIRBP-203ENST00000444172 TSPY2A6NKD2 308 aa21.2■□□□□ 0.98
CIRBP-203ENST00000444172 IRF6O14896 467 aa21.2■□□□□ 0.98
CIRBP-203ENST00000444172 ZBTB48P10074 688 aaPredicted RBP21.2■□□□□ 0.98
CIRBP-203ENST00000444172 GUCY1A2P33402 732 aa21.2■□□□□ 0.98
CIRBP-203ENST00000444172 PPIL2Q13356 520 aa21.2■□□□□ 0.98
CIRBP-203ENST00000444172 CREB3L3Q68CJ9 461 aa21.2■□□□□ 0.98
CIRBP-203ENST00000444172 SLC27A2O14975 620 aa21.19■□□□□ 0.98
CIRBP-203ENST00000444172 ORC4O43929 436 aa21.19■□□□□ 0.98
CIRBP-203ENST00000444172 FGRP09769 529 aa21.19■□□□□ 0.98
CIRBP-203ENST00000444172 NOGQ13253 232 aa21.19■□□□□ 0.98
CIRBP-203ENST00000444172 NECTIN1Q15223 517 aa21.19■□□□□ 0.98
CIRBP-203ENST00000444172 AFG3L2Q9Y4W6 797 aa21.19■□□□□ 0.98
CIRBP-203ENST00000444172 PHIPQ8WWQ0 1821 aa21.19■□□□□ 0.98
CIRBP-203ENST00000444172 TRIM75PA6NK02 468 aa21.18■□□□□ 0.98
CIRBP-203ENST00000444172 PCP11498 1178 aaKnown RBP21.18■□□□□ 0.98
CIRBP-203ENST00000444172 ATP2B2Q01814 1243 aa21.18■□□□□ 0.98
CIRBP-203ENST00000444172 KIF23Q02241 960 aaPredicted RBP21.18■□□□□ 0.98
CIRBP-203ENST00000444172 TRDNQ13061 729 aa21.18■□□□□ 0.98
CIRBP-203ENST00000444172 SPP2Q13103 211 aa21.18■□□□□ 0.98
CIRBP-203ENST00000444172 RNF20Q5VTR2 975 aa21.18■□□□□ 0.98
CIRBP-203ENST00000444172 ZNF280CQ8ND82 737 aa21.18■□□□□ 0.98
CIRBP-203ENST00000444172 ZIC5Q96T25 663 aa21.18■□□□□ 0.98
CIRBP-203ENST00000444172 TBC1D2Q9BYX2 928 aa21.18■□□□□ 0.98
CIRBP-203ENST00000444172 NEDD4P46934 1319 aa21.18■□□□□ 0.98
CIRBP-203ENST00000444172 B4E1Z4 1266 aa21.17■□□□□ 0.98
CIRBP-203ENST00000444172 E7EWF7 191 aa21.17■□□□□ 0.98
CIRBP-203ENST00000444172 C8orf34Q49A92 452 aa21.17■□□□□ 0.98
CIRBP-203ENST00000444172 DNAJC5GQ8N7S2 189 aa21.17■□□□□ 0.98
CIRBP-203ENST00000444172 NEDD1Q8NHV4 660 aa21.17■□□□□ 0.98
CIRBP-203ENST00000444172 ESR2Q92731 530 aa21.17■□□□□ 0.98
CIRBP-203ENST00000444172 KRT23Q9C075 422 aa21.17■□□□□ 0.98
CIRBP-203ENST00000444172 CNNM2Q9H8M5 875 aa21.17■□□□□ 0.98
CIRBP-203ENST00000444172 TAF6LQ9Y6J9 622 aa21.17■□□□□ 0.98
CIRBP-203ENST00000444172 CXCL11O14625 94 aa21.16■□□□□ 0.98
CIRBP-203ENST00000444172 EIF5BO60841 1220 aaKnown RBP21.16■□□□□ 0.98
CIRBP-203ENST00000444172 KDM4AO75164 1064 aa21.16■□□□□ 0.98
CIRBP-203ENST00000444172 GTF2A2P52657 109 aa21.16■□□□□ 0.98
CIRBP-203ENST00000444172 ICA1Q05084 483 aa21.16■□□□□ 0.98
CIRBP-203ENST00000444172 SNAPC2Q13487 334 aa21.16■□□□□ 0.98
CIRBP-203ENST00000444172 CLEC10AQ8IUN9 316 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms