RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 TAOK2Q9UL54 1235 aa18.71■□□□□ 0.59
PIKFYVE-206ENST00000443896 SLC3A2P08195 630 aaKnown RBP18.71■□□□□ 0.59
PIKFYVE-206ENST00000443896 MECOMQ03112 1051 aa18.71■□□□□ 0.59
PIKFYVE-206ENST00000443896 NCBP1Q09161 790 aaKnown RBP18.71■□□□□ 0.59
PIKFYVE-206ENST00000443896 SHC4Q6S5L8 630 aa18.71■□□□□ 0.59
PIKFYVE-206ENST00000443896 BPIFA3Q9BQP9 254 aa18.71■□□□□ 0.59
PIKFYVE-206ENST00000443896 OGFRQ9NZT2 677 aa18.71■□□□□ 0.59
PIKFYVE-206ENST00000443896 TAF1LQ8IZX4 1826 aa18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 LY75O60449 1722 aa18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 RBM6P78332 1123 aaKnown RBP18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 SAFBQ15424 915 aaKnown RBP eCLIP18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 CTR9Q6PD62 1173 aa18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 ZSCAN10Q96SZ4 725 aaPredicted RBP18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 FOXP1Q9H334 677 aaPredicted RBP18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 CLIP2Q9UDT6 1046 aa18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 BAZ2AQ9UIF9 1905 aaKnown RBP18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 BTBD18B2RXH4 712 aa18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 ENAHQ8N8S7 591 aaPredicted RBP18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 NUP133Q8WUM0 1156 aa18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 TFCP2L1Q9NZI6 479 aa18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 NRBP1Q9UHY1 535 aa18.7■□□□□ 0.58
PIKFYVE-206ENST00000443896 CAPN2P17655 700 aa18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 RESP18Q5W5W9 173 aa18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 DIS3L2Q8IYB7 885 aaKnown RBP18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 CCDC24Q8N4L8 307 aa18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 IRS2Q9Y4H2 1338 aa18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 CYP2D7A0A087X1C5 515 aa18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 CUTAO60888 179 aa18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 SYKP43405 635 aa18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 TMED8Q6PL24 325 aaPredicted RBP18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 AOPEPQ8N6M6 819 aa18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 MAST2Q6P0Q8 1798 aa18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 DPCR1Q3MIW9 517 aa18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 CMTR1Q8N1G2 835 aaKnown RBP18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 KCNJ14Q9UNX9 436 aa18.69■□□□□ 0.58
PIKFYVE-206ENST00000443896 TNRC6CQ9HCJ0 1690 aaKnown RBP18.68■□□□□ 0.58
PIKFYVE-206ENST00000443896 ZRSR1Q15695 479 aaKnown RBP18.68■□□□□ 0.58
PIKFYVE-206ENST00000443896 FAM182BQ5T319 152 aa18.68■□□□□ 0.58
PIKFYVE-206ENST00000443896 CCDC82Q8N4S0 544 aa18.68■□□□□ 0.58
PIKFYVE-206ENST00000443896 RNF26Q9BY78 433 aaPredicted RBP18.68■□□□□ 0.58
PIKFYVE-206ENST00000443896 DLEC1Q9Y238 1755 aa18.68■□□□□ 0.58
PIKFYVE-206ENST00000443896 TOB1P50616 345 aaPredicted RBP18.68■□□□□ 0.58
PIKFYVE-206ENST00000443896 NLRP12P59046 1061 aa18.68■□□□□ 0.58
PIKFYVE-206ENST00000443896 MYH2Q9UKX2 1941 aa18.68■□□□□ 0.58
PIKFYVE-206ENST00000443896 ANKRD7Q92527 254 aa18.68■□□□□ 0.58
PIKFYVE-206ENST00000443896 CLIC6Q96NY7 704 aa18.67■□□□□ 0.58
PIKFYVE-206ENST00000443896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.67■□□□□ 0.58
PIKFYVE-206ENST00000443896 SPATA31A6Q5VVP1 1343 aa18.67■□□□□ 0.58
PIKFYVE-206ENST00000443896 USP17L12C9JPN9 530 aa18.67■□□□□ 0.58
PIKFYVE-206ENST00000443896 USP17L21D6R901 530 aa18.67■□□□□ 0.58
PIKFYVE-206ENST00000443896 PRDX5P30044 214 aa18.67■□□□□ 0.58
PIKFYVE-206ENST00000443896 RILPL1Q5EBL4 403 aa18.67■□□□□ 0.58
PIKFYVE-206ENST00000443896 IQCA1Q86XH1 822 aa18.67■□□□□ 0.58
PIKFYVE-206ENST00000443896 DCP1AQ9NPI6 582 aaPredicted RBP18.67■□□□□ 0.58
PIKFYVE-206ENST00000443896 IRX3P78415 501 aaPredicted RBP18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 CCDC144BQ3MJ40 725 aa18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 IFIT1BQ5T764 474 aaKnown RBP18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 TXNRD3Q86VQ6 643 aa18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 FBXW7Q969H0 707 aa18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 CRNKL1Q9BZJ0 848 aaKnown RBP18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 ATP8A2Q9NTI2 1148 aa18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 AATFQ9NY61 560 aaKnown RBP eCLIP18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 TUBE1Q9UJT0 475 aa18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 LAMB1P07942 1786 aa18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 FUT2Q10981 343 aa18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 CATIPQ7Z7H3 387 aa18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 KRI1Q8N9T8 703 aaKnown RBP18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 ORC4O43929 436 aa18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 PRDM1O75626 825 aa18.66■□□□□ 0.58
PIKFYVE-206ENST00000443896 RFC4P35249 363 aa18.65■□□□□ 0.58
PIKFYVE-206ENST00000443896 LRMPQ12912 555 aa18.65■□□□□ 0.58
PIKFYVE-206ENST00000443896 TROAPQ12815 778 aa18.65■□□□□ 0.58
PIKFYVE-206ENST00000443896 RBM28Q9NW13 759 aaKnown RBP18.65■□□□□ 0.58
PIKFYVE-206ENST00000443896 CCDC88AQ3V6T2 1871 aa18.65■□□□□ 0.58
PIKFYVE-206ENST00000443896 CALM1P0DP23 149 aa18.64■□□□□ 0.58
PIKFYVE-206ENST00000443896 CALM2P0DP24 149 aa18.64■□□□□ 0.58
PIKFYVE-206ENST00000443896 CALM3P0DP25 149 aa18.64■□□□□ 0.58
PIKFYVE-206ENST00000443896 NR5A1Q13285 461 aa18.64■□□□□ 0.58
PIKFYVE-206ENST00000443896 TRAPPC3LQ5T215 181 aa18.64■□□□□ 0.58
PIKFYVE-206ENST00000443896 SBF2Q86WG5 1849 aa18.64■□□□□ 0.57
PIKFYVE-206ENST00000443896 KIAA1551Q9HCM1 1747 aa18.64■□□□□ 0.57
PIKFYVE-206ENST00000443896 BIN1O00499 593 aa18.64■□□□□ 0.57
PIKFYVE-206ENST00000443896 TERF2Q15554 542 aa18.64■□□□□ 0.57
PIKFYVE-206ENST00000443896 PKN1Q16512 942 aa18.64■□□□□ 0.57
PIKFYVE-206ENST00000443896 SBK1Q52WX2 424 aa18.64■□□□□ 0.57
PIKFYVE-206ENST00000443896 CACTINQ8WUQ7 758 aaKnown RBP18.64■□□□□ 0.57
PIKFYVE-206ENST00000443896 KCNH3Q9ULD8 1083 aa18.64■□□□□ 0.57
PIKFYVE-206ENST00000443896 MYH6P13533 1939 aa18.64■□□□□ 0.57
PIKFYVE-206ENST00000443896 PRPF3O43395 683 aaKnown RBP18.64■□□□□ 0.57
PIKFYVE-206ENST00000443896 DDAH1O94760 285 aa18.64■□□□□ 0.57
PIKFYVE-206ENST00000443896 SHISA4Q96DD7 197 aa18.64■□□□□ 0.57
PIKFYVE-206ENST00000443896 ARPP21Q9UBL0 812 aaPredicted RBP18.64■□□□□ 0.57
PIKFYVE-206ENST00000443896 PTPREP23469 700 aa18.63■□□□□ 0.57
PIKFYVE-206ENST00000443896 AKAP17AQ02040 695 aaKnown RBP18.63■□□□□ 0.57
PIKFYVE-206ENST00000443896 GRAPQ13588 217 aa18.63■□□□□ 0.57
PIKFYVE-206ENST00000443896 SPTY2D1Q68D10 685 aaPredicted RBP18.63■□□□□ 0.57
PIKFYVE-206ENST00000443896 ELOA2Q8IYF1 753 aaPredicted RBP18.63■□□□□ 0.57
PIKFYVE-206ENST00000443896 GRAPLQ8TC17 118 aaPredicted RBP18.63■□□□□ 0.57
PIKFYVE-206ENST00000443896 OXER1Q8TDS5 423 aa18.63■□□□□ 0.57
PIKFYVE-206ENST00000443896 FBXO2Q9UK22 296 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms