RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 NEDD1Q8NHV4 660 aa3.28□□□□□ -1.88
LINC00393-201ENST00000443621 ANP32BQ92688 251 aaKnown RBP3.28□□□□□ -1.88
LINC00393-201ENST00000443621 DPF2Q92785 391 aa3.28□□□□□ -1.88
LINC00393-201ENST00000443621 HOOK2Q96ED9 719 aa3.28□□□□□ -1.88
LINC00393-201ENST00000443621 C8orf76Q96K31 380 aa3.28□□□□□ -1.88
LINC00393-201ENST00000443621 SPZ1Q9BXG8 430 aa3.28□□□□□ -1.88
LINC00393-201ENST00000443621 BRMS1Q9HCU9 246 aa3.28□□□□□ -1.88
LINC00393-201ENST00000443621 AATFQ9NY61 560 aaKnown RBP eCLIP3.28□□□□□ -1.886e-7■■■■■ 46.9
LINC00393-201ENST00000443621 PI4KBQ9UBF8 816 aa3.28□□□□□ -1.88
LINC00393-201ENST00000443621 HDAC9Q9UKV0 1011 aa3.28□□□□□ -1.88
LINC00393-201ENST00000443621 IQSEC3Q9UPP2 1182 aaPredicted RBP3.28□□□□□ -1.88
LINC00393-201ENST00000443621 BAZ2AQ9UIF9 1905 aaKnown RBP3.28□□□□□ -1.88
LINC00393-201ENST00000443621 SLX4Q8IY92 1834 aa3.28□□□□□ -1.88
LINC00393-201ENST00000443621 MYH6P13533 1939 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 MYH8P13535 1937 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 TNKSO95271 1327 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 FLT1P17948 1338 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 NEDD4P46934 1319 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 IGKV6D-41A0A0C4DH26 115 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 PALM3A6NDB9 673 aaPredicted RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 GOLGA6L4A6NEF3 574 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 GOLGA6L3A6NEY3 463 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 TSPY2A6NKD2 308 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 GOLGA8AA7E2F4 631 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 B4E1Z4 1266 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 G3V3G9 751 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 SNAP23O00161 211 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 PRPF40AO75400 957 aaKnown RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 LARGE1O95461 756 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 MMP1P03956 469 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 MYL1P05976 194 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 FDX1P10109 184 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 TOP1P11387 765 aaKnown RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 KCNA3P22001 575 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 CMA1P23946 247 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 GNA11P29992 359 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 ADD1P35611 737 aaKnown RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 BTDP43251 543 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 EN1Q05925 392 aaPredicted RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 APOBRQ0VD83 1088 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 TNFAIP1Q13829 316 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 TNIP1Q15025 636 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 SLC39A14Q15043 492 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 EZH2Q15910 746 aaKnown RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 PFKFB3Q16875 520 aaPredicted RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 ASPRV1Q53RT3 343 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 CCDC183Q5T5S1 534 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 DCAF8Q5TAQ9 597 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 MYSM1Q5VVJ2 828 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 ARL6IP4Q66PJ3 421 aaKnown RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 MCTP1Q6DN14 999 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 APOBEC3HQ6NTF7 200 aaKnown RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 KANK3Q6NY19 840 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 PPP1R18Q6NYC8 613 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 TATDN1Q6P1N9 297 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 NFXL1Q6ZNB6 911 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 TMTC3Q6ZXV5 915 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 CYB5R4Q7L1T6 521 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 ADGRA1Q86SQ6 560 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 NBPF11Q86T75 865 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 OGFOD1Q8N543 542 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 ENAHQ8N8S7 591 aaPredicted RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 MIGA1Q8NAN2 632 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 DAGLBQ8NCG7 672 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 CCDC148Q8NFR7 591 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 CTCFLQ8NI51 663 aaPredicted RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 BICD2Q8TD16 824 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 SDR42E1Q8WUS8 393 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 LEO1Q8WVC0 666 aaPredicted RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 FERMT2Q96AC1 680 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 GMLQ99445 158 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 NAP1L4Q99733 375 aaKnown RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 ALG1Q9BT22 464 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 OSBPL5Q9H0X9 879 aaPredicted RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 BCL11AQ9H165 835 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 KANSL2Q9H9L4 492 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 MKNK2Q9HBH9 465 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 FAM217BQ9NTX9 383 aaPredicted RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 MCM9Q9NXL9 1143 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 MAP3K20Q9NYL2 800 aaKnown RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 PIM2Q9P1W9 311 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 NYAP2Q9P242 653 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 ORC3Q9UBD5 711 aaPredicted RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 USP25Q9UHP3 1055 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 SERPINB13Q9UIV8 391 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 HOOK1Q9UJC3 728 aaKnown RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 BRPF3Q9ULD4 1205 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 ZNRF3Q9ULT6 936 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 DAGLAQ9Y4D2 1042 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 TAF6LQ9Y6J9 622 aa3.27□□□□□ -1.89
LINC00393-201ENST00000443621 DICER1Q9UPY3 1922 aaKnown RBP3.27□□□□□ -1.89
LINC00393-201ENST00000443621 ZC3H4Q9UPT8 1303 aaKnown RBP3.26□□□□□ -1.89
LINC00393-201ENST00000443621 VPS37CA5D8V6 355 aaPredicted RBP3.26□□□□□ -1.89
LINC00393-201ENST00000443621 UNCXA6NJT0 531 aa3.26□□□□□ -1.89
LINC00393-201ENST00000443621 MINDY4BA8MYZ0 360 aa3.26□□□□□ -1.89
LINC00393-201ENST00000443621 PRKAB2O43741 272 aa3.26□□□□□ -1.89
LINC00393-201ENST00000443621 RANBP6O60518 1105 aaKnown RBP3.26□□□□□ -1.89
LINC00393-201ENST00000443621 CUTAO60888 179 aa3.26□□□□□ -1.89
LINC00393-201ENST00000443621 WDHD1O75717 1129 aaPredicted RBP3.26□□□□□ -1.89
LINC00393-201ENST00000443621 TTLL1O95922 423 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms