RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 USP28Q96RU2 1077 aa9.98□□□□□ -0.81
RER1-205ENST00000443438 NOL10Q9BSC4 688 aaKnown RBP9.98□□□□□ -0.81
RER1-205ENST00000443438 MRIQ9BWK5 157 aa9.98□□□□□ -0.81
RER1-205ENST00000443438 FTOQ9C0B1 505 aaKnown RBP eCLIP9.98□□□□□ -0.818e-16■□□□□ 9.3
RER1-205ENST00000443438 TCP11L1Q9NUJ3 509 aa9.98□□□□□ -0.81
RER1-205ENST00000443438 RTEL1Q9NZ71 1219 aa9.98□□□□□ -0.81
RER1-205ENST00000443438 FLT1P17948 1338 aa9.98□□□□□ -0.81
RER1-205ENST00000443438 ZNF646O15015 1829 aaPredicted RBP9.98□□□□□ -0.81
RER1-205ENST00000443438 MYH2Q9UKX2 1941 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 UTRNP46939 3433 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 SYCE3A1L190 88 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 DDAH1O94760 285 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 LIG1P18858 919 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 RASA1P20936 1047 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 NOVP48745 357 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 TFAP4Q01664 338 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 SF3B2Q13435 895 aaKnown RBP9.97□□□□□ -0.81
RER1-205ENST00000443438 DACT2Q5SW24 774 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 CCDC183Q5T5S1 534 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 IFIT1BQ5T764 474 aaKnown RBP9.97□□□□□ -0.81
RER1-205ENST00000443438 CC2D2BQ6DHV5 1058 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 APOBEC3HQ6NTF7 200 aaKnown RBP9.97□□□□□ -0.81
RER1-205ENST00000443438 C16orf86Q6ZW13 317 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 IQCA1Q86XH1 822 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 CMTR1Q8N1G2 835 aaKnown RBP9.97□□□□□ -0.81
RER1-205ENST00000443438 SLC16A10Q8TF71 515 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 ZNF396Q96N95 335 aaPredicted RBP9.97□□□□□ -0.81
RER1-205ENST00000443438 SLC26A6Q9BXS9 759 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 RBSNQ9H1K0 784 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 DBNDD1Q9H9R9 158 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 SAP30BPQ9UHR5 308 aaKnown RBP9.97□□□□□ -0.81
RER1-205ENST00000443438 CFAP45Q9UL16 551 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 TTF2Q9UNY4 1162 aaKnown RBP9.97□□□□□ -0.81
RER1-205ENST00000443438 NAV1Q8NEY1 1877 aa9.97□□□□□ -0.81
RER1-205ENST00000443438 ECM29Q5VYK3 1845 aa9.96□□□□□ -0.81
RER1-205ENST00000443438 CDK5RAP2Q96SN8 1893 aa9.96□□□□□ -0.81
RER1-205ENST00000443438 CCDC196A0A1B0GTZ2 297 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 PRPF3O43395 683 aaKnown RBP9.96□□□□□ -0.82
RER1-205ENST00000443438 ECE2O60344 883 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 WDHD1O75717 1129 aaPredicted RBP9.96□□□□□ -0.82
RER1-205ENST00000443438 PLEKHA8P1O95397 391 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 POLR3DP05423 398 aaPredicted RBP9.96□□□□□ -0.82
RER1-205ENST00000443438 CALM1P0DP23 149 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 CALM2P0DP24 149 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 CALM3P0DP25 149 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 U2AF2P26368 475 aaKnown RBP eCLIP9.96□□□□□ -0.826e-7■□□□□ 11
RER1-205ENST00000443438 NASPP49321 788 aaPredicted RBP9.96□□□□□ -0.82
RER1-205ENST00000443438 CDK8P49336 464 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 GABPAQ06546 454 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 KIAA2012Q0VF49 1180 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 PKN1Q16512 942 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 SLC4A8Q2Y0W8 1093 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 STRIP1Q5VSL9 837 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 MYSM1Q5VVJ2 828 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 CDC42EP5Q6NZY7 148 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 TMTC3Q6ZXV5 915 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 BRAPQ7Z569 592 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 CATIPQ7Z7H3 387 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 DGKHQ86XP1 1220 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 SLC44A5Q8NCS7 719 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 NUP133Q8WUM0 1156 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 SYAP1Q96A49 352 aaPredicted RBP9.96□□□□□ -0.82
RER1-205ENST00000443438 FUCA2Q9BTY2 467 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.96□□□□□ -0.82
RER1-205ENST00000443438 PANK2Q9BZ23 570 aa9.96□□□□□ -0.82
RER1-205ENST00000443438 TMX4Q9H1E5 349 aaPredicted RBP9.96□□□□□ -0.82
RER1-205ENST00000443438 DDX4Q9NQI0 724 aaKnown RBP9.96□□□□□ -0.82
RER1-205ENST00000443438 MYH15Q9Y2K3 1946 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 USP17L3A6NCW0 530 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 USP17L4A6NCW7 530 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 TSPY2A6NKD2 308 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 F8W031 263 aaPredicted RBP9.95□□□□□ -0.82
RER1-205ENST00000443438 DEXIO95424 95 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 DPEP1P16444 411 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 USP17L1Q7RTZ2 530 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 SRBD1Q8N5C6 995 aaKnown RBP9.95□□□□□ -0.82
RER1-205ENST00000443438 NEDD1Q8NHV4 660 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 WASF1Q92558 559 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 MAP3K14Q99558 947 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 RNF26Q9BY78 433 aaPredicted RBP9.95□□□□□ -0.82
RER1-205ENST00000443438 USP40Q9NVE5 1235 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 RBM28Q9NW13 759 aaKnown RBP9.95□□□□□ -0.82
RER1-205ENST00000443438 CLIC4Q9Y696 253 aa9.95□□□□□ -0.82
RER1-205ENST00000443438 FOCADQ5VW36 1801 aa9.94□□□□□ -0.82
RER1-205ENST00000443438 CNTNAP5Q8WYK1 1306 aa9.94□□□□□ -0.82
RER1-205ENST00000443438 YDJCA8MPS7 323 aa9.94□□□□□ -0.82
RER1-205ENST00000443438 C21orf2O43822 256 aa9.94□□□□□ -0.82
RER1-205ENST00000443438 LETM1O95202 739 aaPredicted RBP9.94□□□□□ -0.82
RER1-205ENST00000443438 MMP1P03956 469 aa9.94□□□□□ -0.82
RER1-205ENST00000443438 CRKP46108 304 aa9.94□□□□□ -0.82
RER1-205ENST00000443438 SCNN1DP51172 638 aa9.94□□□□□ -0.82
RER1-205ENST00000443438 HDLBPQ00341 1268 aaKnown RBP9.94□□□□□ -0.82
RER1-205ENST00000443438 CEBPZQ03701 1054 aaKnown RBP9.94□□□□□ -0.82
RER1-205ENST00000443438 AOC3Q16853 763 aa9.94□□□□□ -0.82
RER1-205ENST00000443438 SLC35G1Q2M3R5 365 aa9.94□□□□□ -0.82
RER1-205ENST00000443438 CCDC178Q5BJE1 867 aa9.94□□□□□ -0.82
RER1-205ENST00000443438 AMOTL1Q8IY63 956 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms