RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 KIF23Q02241 960 aaPredicted RBP19.14■□□□□ 0.65
USP39-205ENST00000442708 ERO1BQ86YB8 467 aa19.14■□□□□ 0.65
USP39-205ENST00000442708 RAD50Q92878 1312 aa19.14■□□□□ 0.65
USP39-205ENST00000442708 ROBO3Q96MS0 1386 aa19.14■□□□□ 0.65
USP39-205ENST00000442708 LAMA4Q16363 1823 aa19.14■□□□□ 0.65
USP39-205ENST00000442708 MFAP1P55081 439 aaKnown RBP19.13■□□□□ 0.65
USP39-205ENST00000442708 PTH1RQ03431 593 aa19.13■□□□□ 0.65
USP39-205ENST00000442708 NOGQ13253 232 aa19.13■□□□□ 0.65
USP39-205ENST00000442708 PTPRFP10586 1907 aa19.13■□□□□ 0.65
USP39-205ENST00000442708 IRF6O14896 467 aa19.12■□□□□ 0.65
USP39-205ENST00000442708 ZBTB48P10074 688 aaPredicted RBP19.12■□□□□ 0.65
USP39-205ENST00000442708 GUCY1A2P33402 732 aa19.12■□□□□ 0.65
USP39-205ENST00000442708 MAP2K2P36507 400 aa19.12■□□□□ 0.65
USP39-205ENST00000442708 CTDSPL2Q05D32 466 aa19.12■□□□□ 0.65
USP39-205ENST00000442708 PPARAQ07869 468 aa19.12■□□□□ 0.65
USP39-205ENST00000442708 CERKLQ49MI3 558 aaPredicted RBP19.12■□□□□ 0.65
USP39-205ENST00000442708 AMOTL1Q8IY63 956 aa19.12■□□□□ 0.65
USP39-205ENST00000442708 RUFY2Q8WXA3 655 aa19.12■□□□□ 0.65
USP39-205ENST00000442708 ESYT1Q9BSJ8 1104 aa19.12■□□□□ 0.65
USP39-205ENST00000442708 DSCC1Q9BVC3 393 aa19.12■□□□□ 0.65
USP39-205ENST00000442708 NBPF3Q9H094 633 aa19.12■□□□□ 0.65
USP39-205ENST00000442708 INCENPQ9NQS7 918 aa19.12■□□□□ 0.65
USP39-205ENST00000442708 GTF3C3Q9Y5Q9 886 aa19.12■□□□□ 0.65
USP39-205ENST00000442708 ZMYM6O95789 1325 aa19.11■□□□□ 0.65
USP39-205ENST00000442708 GH2P01242 217 aa19.11■□□□□ 0.65
USP39-205ENST00000442708 PPATQ06203 517 aa19.11■□□□□ 0.65
USP39-205ENST00000442708 PPIL2Q13356 520 aa19.11■□□□□ 0.65
USP39-205ENST00000442708 MS4A4AQ96JQ5 239 aa19.11■□□□□ 0.65
USP39-205ENST00000442708 PICK1Q9NRD5 415 aa19.11■□□□□ 0.65
USP39-205ENST00000442708 SWAP70Q9UH65 585 aa19.11■□□□□ 0.65
USP39-205ENST00000442708 ZBTB21Q9ULJ3 1066 aa19.11■□□□□ 0.65
USP39-205ENST00000442708 ZHX2Q9Y6X8 837 aa19.11■□□□□ 0.65
USP39-205ENST00000442708 GREB1LQ9C091 1923 aaPredicted RBP19.11■□□□□ 0.65
USP39-205ENST00000442708 CDC45O75419 566 aa19.1■□□□□ 0.65
USP39-205ENST00000442708 AKR1B1P15121 316 aa19.1■□□□□ 0.65
USP39-205ENST00000442708 ANAPC4Q9UJX5 808 aa19.1■□□□□ 0.65
USP39-205ENST00000442708 AFG3L2Q9Y4W6 797 aa19.1■□□□□ 0.65
USP39-205ENST00000442708 PRDM1O75626 825 aa19.09■□□□□ 0.65
USP39-205ENST00000442708 RASA1P20936 1047 aa19.09■□□□□ 0.65
USP39-205ENST00000442708 HAND2P61296 217 aa19.09■□□□□ 0.65
USP39-205ENST00000442708 ABCB5Q2M3G0 1257 aa19.09■□□□□ 0.65
USP39-205ENST00000442708 TAOK2Q9UL54 1235 aa19.09■□□□□ 0.65
USP39-205ENST00000442708 KCNH4Q9UQ05 1017 aa19.09■□□□□ 0.65
USP39-205ENST00000442708 USP17L5A8MUK1 530 aa19.08■□□□□ 0.64
USP39-205ENST00000442708 ASNSP08243 561 aa19.08■□□□□ 0.64
USP39-205ENST00000442708 NKX2-3Q8TAU0 364 aa19.08■□□□□ 0.64
USP39-205ENST00000442708 BRI3BPQ8WY22 251 aa19.08■□□□□ 0.64
USP39-205ENST00000442708 PTPN18Q99952 460 aa19.08■□□□□ 0.64
USP39-205ENST00000442708 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.08■□□□□ 0.64
USP39-205ENST00000442708 TM4SF4P48230 202 aa19.07■□□□□ 0.64
USP39-205ENST00000442708 MOGSQ13724 837 aa19.07■□□□□ 0.64
USP39-205ENST00000442708 SEPT2Q15019 361 aa19.07■□□□□ 0.64
USP39-205ENST00000442708 CLEC10AQ8IUN9 316 aa19.07■□□□□ 0.64
USP39-205ENST00000442708 TBC1D10CQ8IV04 446 aa19.07■□□□□ 0.64
USP39-205ENST00000442708 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.07■□□□□ 0.64
USP39-205ENST00000442708 LSG1Q9H089 658 aaKnown RBP19.07■□□□□ 0.64
USP39-205ENST00000442708 GINM1Q9NU53 330 aa19.07■□□□□ 0.64
USP39-205ENST00000442708 TESPA1A2RU30 521 aaPredicted RBP19.06■□□□□ 0.64
USP39-205ENST00000442708 MANSC4A6NHS7 340 aaPredicted RBP19.06■□□□□ 0.64
USP39-205ENST00000442708 TRIM75PA6NK02 468 aa19.06■□□□□ 0.64
USP39-205ENST00000442708 IGF2BP3O00425 579 aaKnown RBP eCLIP19.06■□□□□ 0.64
USP39-205ENST00000442708 MPHOSPH10O00566 681 aaKnown RBP19.06■□□□□ 0.64
USP39-205ENST00000442708 GTF2A2P52657 109 aa19.06■□□□□ 0.64
USP39-205ENST00000442708 SPP2Q13103 211 aa19.06■□□□□ 0.64
USP39-205ENST00000442708 DGKZQ13574 1117 aa19.06■□□□□ 0.64
USP39-205ENST00000442708 RAB3GAP1Q15042 981 aa19.06■□□□□ 0.64
USP39-205ENST00000442708 MAP4K1Q92918 833 aa19.06■□□□□ 0.64
USP39-205ENST00000442708 WDR18Q9BV38 432 aa19.06■□□□□ 0.64
USP39-205ENST00000442708 MKNK2Q9HBH9 465 aa19.06■□□□□ 0.64
USP39-205ENST00000442708 WBP1LQ9NX94 342 aa19.06■□□□□ 0.64
USP39-205ENST00000442708 LOC285556D6RIA3 1793 aa19.06■□□□□ 0.64
USP39-205ENST00000442708 CXCL11O14625 94 aa19.05■□□□□ 0.64
USP39-205ENST00000442708 FGRP09769 529 aa19.05■□□□□ 0.64
USP39-205ENST00000442708 SNAPC2Q13487 334 aa19.05■□□□□ 0.64
USP39-205ENST00000442708 SIAH1Q8IUQ4 282 aa19.05■□□□□ 0.64
USP39-205ENST00000442708 ZNF280CQ8ND82 737 aa19.05■□□□□ 0.64
USP39-205ENST00000442708 ACER1Q8TDN7 264 aa19.05■□□□□ 0.64
USP39-205ENST00000442708 CCDC17Q96LX7 622 aa19.05■□□□□ 0.64
USP39-205ENST00000442708 CABP5Q9NP86 173 aa19.05■□□□□ 0.64
USP39-205ENST00000442708 TAF6LQ9Y6J9 622 aa19.05■□□□□ 0.64
USP39-205ENST00000442708 CCL15-CCL14A0A0B4J2E2 113 aa19.04■□□□□ 0.64
USP39-205ENST00000442708 A0A0G2JLL6 359 aaPredicted RBP19.04■□□□□ 0.64
USP39-205ENST00000442708 HSPA1AP0DMV8 641 aaKnown RBP19.04■□□□□ 0.64
USP39-205ENST00000442708 HSPA1BP0DMV9 641 aaKnown RBP19.04■□□□□ 0.64
USP39-205ENST00000442708 PDE4BQ07343 736 aa19.04■□□□□ 0.64
USP39-205ENST00000442708 CCL15Q16663 113 aa19.04■□□□□ 0.64
USP39-205ENST00000442708 FAM47AQ5JRC9 791 aa19.04■□□□□ 0.64
USP39-205ENST00000442708 TMEM179Q6ZVK1 233 aa19.04■□□□□ 0.64
USP39-205ENST00000442708 PRRT2Q7Z6L0 340 aaPredicted RBP19.04■□□□□ 0.64
USP39-205ENST00000442708 IFNL1Q8IU54 200 aa19.04■□□□□ 0.64
USP39-205ENST00000442708 A0A1W2PRG0 241 aa19.03■□□□□ 0.64
USP39-205ENST00000442708 ZNF213O14771 459 aa19.03■□□□□ 0.64
USP39-205ENST00000442708 ORC4O43929 436 aa19.03■□□□□ 0.64
USP39-205ENST00000442708 SLC3A2P08195 630 aaKnown RBP19.03■□□□□ 0.64
USP39-205ENST00000442708 CETPP11597 493 aa19.03■□□□□ 0.64
USP39-205ENST00000442708 MAP2K1Q02750 393 aaPredicted RBP19.03■□□□□ 0.64
USP39-205ENST00000442708 SREBF2Q12772 1141 aa19.03■□□□□ 0.64
USP39-205ENST00000442708 STAG1Q8WVM7 1258 aa19.03■□□□□ 0.64
USP39-205ENST00000442708 ANO2Q9NQ90 1003 aa19.03■□□□□ 0.64
USP39-205ENST00000442708 CTNNA3Q9UI47 895 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms