RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 GRM1Q13255 1194 aa12.08□□□□□ -0.48
SYNE2-206ENST00000441438 SRLQ86TD4 932 aa12.08□□□□□ -0.48
SYNE2-206ENST00000441438 TIGD1Q96MW7 591 aa12.08□□□□□ -0.48
SYNE2-206ENST00000441438 BEGAINQ9BUH8 593 aa12.08□□□□□ -0.48
SYNE2-206ENST00000441438 FANCFQ9NPI8 374 aa12.08□□□□□ -0.48
SYNE2-206ENST00000441438 SQORQ9Y6N5 450 aa12.08□□□□□ -0.48
SYNE2-206ENST00000441438 MCL1Q07820 350 aa12.08□□□□□ -0.48
SYNE2-206ENST00000441438 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.08□□□□□ -0.48
SYNE2-206ENST00000441438 ALG2Q9H553 416 aa12.08□□□□□ -0.48
SYNE2-206ENST00000441438 SMYD2Q9NRG4 433 aa12.08□□□□□ -0.48
SYNE2-206ENST00000441438 TSKSQ9UJT2 592 aa12.08□□□□□ -0.48
SYNE2-206ENST00000441438 PDE4AP27815 886 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 MRE11P49959 708 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 PDE3BQ13370 1112 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 MMS22LQ6ZRQ5 1243 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 DRAXINQ8NBI3 349 aaPredicted RBP12.07□□□□□ -0.48
SYNE2-206ENST00000441438 PCDHGB7Q9Y5F8 929 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 LRPPRCP42704 1394 aaKnown RBP12.07□□□□□ -0.48
SYNE2-206ENST00000441438 GPRASP1Q5JY77 1395 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 ADAMTS13Q76LX8 1427 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 C2orf81A6NN90 581 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 FGFR1OPO95684 399 aaKnown RBP12.07□□□□□ -0.48
SYNE2-206ENST00000441438 USP6NLQ92738 828 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 EIF2AK1Q9BQI3 630 aaKnown RBP12.07□□□□□ -0.48
SYNE2-206ENST00000441438 RIMS2Q9UQ26 1411 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 ABCC6O95255 1503 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 RAB27AP51159 221 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 EPHB1P54762 984 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 TRAF1Q13077 416 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 LAMC2Q13753 1193 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 MAP7D1Q3KQU3 841 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 STON2Q8WXE9 905 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 JAKMIP2Q96AA8 810 aa12.07□□□□□ -0.48
SYNE2-206ENST00000441438 KTN1Q86UP2 1357 aaKnown RBP12.06□□□□□ -0.48
SYNE2-206ENST00000441438 MUSKO15146 869 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 GNPATO15228 680 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 LZTS3O60299 673 aaPredicted RBP12.06□□□□□ -0.48
SYNE2-206ENST00000441438 ST13P50502 369 aaKnown RBP12.06□□□□□ -0.48
SYNE2-206ENST00000441438 PDE4BQ07343 736 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 MCTP2Q6DN12 878 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 SRRTQ9BXP5 876 aaKnown RBP12.06□□□□□ -0.48
SYNE2-206ENST00000441438 C2CD2Q9Y426 696 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 SLC30A1Q9Y6M5 507 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 TRIM64A6NGJ6 449 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 TRIM64BA6NI03 449 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 PRPF3O43395 683 aaKnown RBP12.06□□□□□ -0.48
SYNE2-206ENST00000441438 CDKL5O76039 1030 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 SERPINB3P29508 390 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 TBC1D9Q6ZT07 1266 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 BICD1Q96G01 975 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 CRISPLD2Q9H0B8 497 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 QPCTLQ9NXS2 382 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 ATP8A1Q9Y2Q0 1164 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 ATP6V0A2Q9Y487 856 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 RAD50Q92878 1312 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 SHPRHQ149N8 1683 aa12.06□□□□□ -0.48
SYNE2-206ENST00000441438 P4HBP07237 508 aaKnown RBP12.05□□□□□ -0.48
SYNE2-206ENST00000441438 TMEM259Q4ZIN3 620 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 SRPK1Q96SB4 655 aaKnown RBP12.05□□□□□ -0.48
SYNE2-206ENST00000441438 STAP2Q9UGK3 403 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 CCDC66A2RUB6 948 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 IFIT2P09913 472 aaKnown RBP12.05□□□□□ -0.48
SYNE2-206ENST00000441438 RACK1P63244 317 aaKnown RBP12.05□□□□□ -0.48
SYNE2-206ENST00000441438 PIP4K2BP78356 416 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 CAMK2BQ13554 666 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 DCAF8Q5TAQ9 597 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 HIBCHQ6NVY1 386 aaPredicted RBP12.05□□□□□ -0.48
SYNE2-206ENST00000441438 CEP95Q96GE4 821 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 ZNF594Q96JF6 807 aaPredicted RBP12.05□□□□□ -0.48
SYNE2-206ENST00000441438 MAK16Q9BXY0 300 aaKnown RBP12.05□□□□□ -0.48
SYNE2-206ENST00000441438 CAPS2Q9BXY5 557 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 DEF6Q9H4E7 631 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 KIF3AQ9Y496 699 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 ZNF335Q9H4Z2 1342 aaPredicted RBP12.05□□□□□ -0.48
SYNE2-206ENST00000441438 SLC4A1P02730 911 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 HARSP12081 509 aaKnown RBP12.05□□□□□ -0.48
SYNE2-206ENST00000441438 TNNT3P45378 269 aaPredicted RBP12.05□□□□□ -0.48
SYNE2-206ENST00000441438 AKNAD1Q5T1N1 836 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 SWSAP1Q6NVH7 229 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 NLRP7Q8WX94 980 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 FAM212AQ96EL1 285 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 FAM163AQ96GL9 167 aaPredicted RBP12.05□□□□□ -0.48
SYNE2-206ENST00000441438 DBNDD1Q9H9R9 158 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 ZIM2Q9NZV7 527 aa12.05□□□□□ -0.48
SYNE2-206ENST00000441438 CDV3Q9UKY7 258 aaKnown RBP12.05□□□□□ -0.48
SYNE2-206ENST00000441438 ASXL1Q8IXJ9 1541 aa12.04□□□□□ -0.48
SYNE2-206ENST00000441438 GPR37L1O60883 481 aa12.04□□□□□ -0.48
SYNE2-206ENST00000441438 PLA2G4AP47712 749 aa12.04□□□□□ -0.48
SYNE2-206ENST00000441438 GJA8P48165 433 aa12.04□□□□□ -0.48
SYNE2-206ENST00000441438 SLC4A3P48751 1232 aa12.04□□□□□ -0.48
SYNE2-206ENST00000441438 FKBP15Q5T1M5 1219 aa12.04□□□□□ -0.48
SYNE2-206ENST00000441438 WWC2Q6AWC2 1192 aa12.04□□□□□ -0.48
SYNE2-206ENST00000441438 TMEM110Q86TL2 294 aa12.04□□□□□ -0.48
SYNE2-206ENST00000441438 RBM12BQ8IXT5 1001 aaKnown RBP12.04□□□□□ -0.48
SYNE2-206ENST00000441438 GPCPD1Q9NPB8 672 aa12.04□□□□□ -0.48
SYNE2-206ENST00000441438 ZNHIT6Q9NWK9 470 aaKnown RBP12.04□□□□□ -0.48
SYNE2-206ENST00000441438 NUTM2FA1L443 756 aa12.04□□□□□ -0.48
SYNE2-206ENST00000441438 INCENPQ9NQS7 918 aa12.04□□□□□ -0.48
SYNE2-206ENST00000441438 ROCK2O75116 1388 aaKnown RBP12.03□□□□□ -0.48
SYNE2-206ENST00000441438 RTCAO00442 366 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms