RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 BCRP11274 1271 aa21.97■■□□□ 1.11
SMPD4-210ENST00000441135 IRX6P78412 446 aaPredicted RBP21.97■■□□□ 1.11
SMPD4-210ENST00000441135 LRRFIP1Q32MZ4 808 aaKnown RBP21.97■■□□□ 1.11
SMPD4-210ENST00000441135 SLC9C1Q4G0N8 1177 aa21.97■■□□□ 1.11
SMPD4-210ENST00000441135 CHD1LQ86WJ1 897 aa21.97■■□□□ 1.11
SMPD4-210ENST00000441135 SMCR8Q8TEV9 937 aaPredicted RBP21.97■■□□□ 1.11
SMPD4-210ENST00000441135 WDR18Q9BV38 432 aa21.97■■□□□ 1.11
SMPD4-210ENST00000441135 EHD4Q9H223 541 aa21.97■■□□□ 1.11
SMPD4-210ENST00000441135 PNMA3Q9UL41 463 aa21.97■■□□□ 1.11
SMPD4-210ENST00000441135 ZFYP08048 801 aaPredicted RBP21.96■■□□□ 1.11
SMPD4-210ENST00000441135 HOXD10P28358 340 aa21.96■■□□□ 1.11
SMPD4-210ENST00000441135 PSMC4P43686 418 aa21.96■■□□□ 1.11
SMPD4-210ENST00000441135 TSHZ3Q63HK5 1081 aa21.96■■□□□ 1.11
SMPD4-210ENST00000441135 NBPF11Q86T75 865 aa21.96■■□□□ 1.11
SMPD4-210ENST00000441135 TTC6Q86TZ1 520 aa21.96■■□□□ 1.11
SMPD4-210ENST00000441135 TICAM2Q86XR7 235 aa21.96■■□□□ 1.11
SMPD4-210ENST00000441135 PTPRFP10586 1907 aa21.96■■□□□ 1.11
SMPD4-210ENST00000441135 PDE1AP54750 535 aa21.95■■□□□ 1.1
SMPD4-210ENST00000441135 PABPC4Q13310 644 aaKnown RBP eCLIP21.95■■□□□ 1.1
SMPD4-210ENST00000441135 TRIM47Q96LD4 638 aa21.95■■□□□ 1.1
SMPD4-210ENST00000441135 CRNKL1Q9BZJ0 848 aaKnown RBP21.95■■□□□ 1.1
SMPD4-210ENST00000441135 SERPINB13Q9UIV8 391 aa21.95■■□□□ 1.1
SMPD4-210ENST00000441135 ATAD5Q96QE3 1844 aa21.94■■□□□ 1.1
SMPD4-210ENST00000441135 FMNL1O95466 1100 aaPredicted RBP21.94■■□□□ 1.1
SMPD4-210ENST00000441135 HMGCS2P54868 508 aa21.94■■□□□ 1.1
SMPD4-210ENST00000441135 FCGRTP55899 365 aa21.94■■□□□ 1.1
SMPD4-210ENST00000441135 SH3D19Q5HYK7 790 aa21.94■■□□□ 1.1
SMPD4-210ENST00000441135 ZNF333Q96JL9 665 aa21.94■■□□□ 1.1
SMPD4-210ENST00000441135 LNPKQ9C0E8 428 aa21.94■■□□□ 1.1
SMPD4-210ENST00000441135 SRRDQ9UH36 339 aa21.94■■□□□ 1.1
SMPD4-210ENST00000441135 ZBTB21Q9ULJ3 1066 aa21.94■■□□□ 1.1
SMPD4-210ENST00000441135 LOC285556D6RIA3 1793 aa21.93■■□□□ 1.1
SMPD4-210ENST00000441135 SLC4A8Q2Y0W8 1093 aa21.93■■□□□ 1.1
SMPD4-210ENST00000441135 DDX60LQ5H9U9 1706 aaKnown RBP21.93■■□□□ 1.1
SMPD4-210ENST00000441135 TREML2Q5T2D2 321 aa21.93■■□□□ 1.1
SMPD4-210ENST00000441135 OSBPL3Q9H4L5 887 aa21.93■■□□□ 1.1
SMPD4-210ENST00000441135 GDF11O95390 407 aa21.92■■□□□ 1.1
SMPD4-210ENST00000441135 OSBPP22059 807 aa21.92■■□□□ 1.1
SMPD4-210ENST00000441135 CTGFP29279 349 aa21.92■■□□□ 1.1
SMPD4-210ENST00000441135 BACE1P56817 501 aa21.92■■□□□ 1.1
SMPD4-210ENST00000441135 MTMR2Q13614 643 aa21.92■■□□□ 1.1
SMPD4-210ENST00000441135 TMOD4Q9NZQ9 345 aa21.92■■□□□ 1.1
SMPD4-210ENST00000441135 TAOK2Q9UL54 1235 aa21.92■■□□□ 1.1
SMPD4-210ENST00000441135 MYH1P12882 1939 aa21.91■■□□□ 1.1
SMPD4-210ENST00000441135 JAG1P78504 1218 aa21.91■■□□□ 1.1
SMPD4-210ENST00000441135 B4GALNT3Q6L9W6 998 aa21.91■■□□□ 1.1
SMPD4-210ENST00000441135 TATDN1Q6P1N9 297 aa21.91■■□□□ 1.1
SMPD4-210ENST00000441135 APPBP2Q92624 585 aa21.91■■□□□ 1.1
SMPD4-210ENST00000441135 ZSWIM8A7E2V4 1837 aa21.91■■□□□ 1.1
SMPD4-210ENST00000441135 MYPNQ86TC9 1320 aa21.9■■□□□ 1.1
SMPD4-210ENST00000441135 C19orf81C9J6K1 198 aa21.9■■□□□ 1.1
SMPD4-210ENST00000441135 USP17L10C9JJH3 530 aa21.9■■□□□ 1.1
SMPD4-210ENST00000441135 RNF113AO15541 343 aaKnown RBP21.9■■□□□ 1.1
SMPD4-210ENST00000441135 ECM2O94769 699 aaPredicted RBP21.9■■□□□ 1.1
SMPD4-210ENST00000441135 GCLCP48506 637 aaPredicted RBP21.9■■□□□ 1.1
SMPD4-210ENST00000441135 FAM110CQ1W6H9 321 aa21.9■■□□□ 1.1
SMPD4-210ENST00000441135 LCORLQ8N3X6 602 aa21.9■■□□□ 1.1
SMPD4-210ENST00000441135 TMEM106CQ9BVX2 250 aa21.9■■□□□ 1.1
SMPD4-210ENST00000441135 NAV1Q8NEY1 1877 aa21.9■■□□□ 1.1
SMPD4-210ENST00000441135 MBD4O95243 580 aa21.89■■□□□ 1.09
SMPD4-210ENST00000441135 GH2P01242 217 aa21.89■■□□□ 1.09
SMPD4-210ENST00000441135 POLR3DP05423 398 aaPredicted RBP21.89■■□□□ 1.09
SMPD4-210ENST00000441135 RAET1EQ8TD07 263 aa21.89■■□□□ 1.09
SMPD4-210ENST00000441135 EVI5LQ96CN4 794 aa21.89■■□□□ 1.09
SMPD4-210ENST00000441135 ASCC2Q9H1I8 757 aaPredicted RBP21.89■■□□□ 1.09
SMPD4-210ENST00000441135 ATP8A2Q9NTI2 1148 aa21.89■■□□□ 1.09
SMPD4-210ENST00000441135 MCM9Q9NXL9 1143 aa21.89■■□□□ 1.09
SMPD4-210ENST00000441135 RBBP6Q7Z6E9 1792 aaKnown RBP21.89■■□□□ 1.09
SMPD4-210ENST00000441135 POTEFA5A3E0 1075 aa21.88■■□□□ 1.09
SMPD4-210ENST00000441135 SHROOM1Q2M3G4 852 aaPredicted RBP21.88■■□□□ 1.09
SMPD4-210ENST00000441135 PLEKHM2Q8IWE5 1019 aa21.88■■□□□ 1.09
SMPD4-210ENST00000441135 ANKRD13CQ8N6S4 541 aa21.88■■□□□ 1.09
SMPD4-210ENST00000441135 SH3TC2Q8TF17 1288 aa21.88■■□□□ 1.09
SMPD4-210ENST00000441135 DCP1AQ9NPI6 582 aaPredicted RBP21.88■■□□□ 1.09
SMPD4-210ENST00000441135 TNRC18O15417 2968 aaPredicted RBP21.87■■□□□ 1.09
SMPD4-210ENST00000441135 PLCD1P51178 756 aa21.87■■□□□ 1.09
SMPD4-210ENST00000441135 IRX3P78415 501 aaPredicted RBP21.87■■□□□ 1.09
SMPD4-210ENST00000441135 PRKCZQ05513 592 aa21.87■■□□□ 1.09
SMPD4-210ENST00000441135 CERKLQ49MI3 558 aaPredicted RBP21.87■■□□□ 1.09
SMPD4-210ENST00000441135 FSD1Q9BTV5 496 aa21.87■■□□□ 1.09
SMPD4-210ENST00000441135 PUS7LQ9H0K6 701 aaKnown RBP21.87■■□□□ 1.09
SMPD4-210ENST00000441135 ARMT1Q9H993 441 aa21.87■■□□□ 1.09
SMPD4-210ENST00000441135 TNPO2O14787 897 aaKnown RBP21.86■■□□□ 1.09
SMPD4-210ENST00000441135 HOXA7P31268 230 aaPredicted RBP21.86■■□□□ 1.09
SMPD4-210ENST00000441135 SHMT1P34896 483 aa21.86■■□□□ 1.09
SMPD4-210ENST00000441135 GABPAQ06546 454 aa21.86■■□□□ 1.09
SMPD4-210ENST00000441135 ABCB5Q2M3G0 1257 aa21.86■■□□□ 1.09
SMPD4-210ENST00000441135 SLFNL1Q499Z3 407 aa21.86■■□□□ 1.09
SMPD4-210ENST00000441135 SDR42E1Q8WUS8 393 aa21.86■■□□□ 1.09
SMPD4-210ENST00000441135 OSBP2Q969R2 916 aa21.86■■□□□ 1.09
SMPD4-210ENST00000441135 FEZ1Q99689 392 aa21.86■■□□□ 1.09
SMPD4-210ENST00000441135 CABP5Q9NP86 173 aa21.86■■□□□ 1.09
SMPD4-210ENST00000441135 CHGBP05060 677 aa21.85■■□□□ 1.09
SMPD4-210ENST00000441135 GRK4P32298 578 aa21.85■■□□□ 1.09
SMPD4-210ENST00000441135 GIMAP6Q6P9H5 292 aa21.85■■□□□ 1.09
SMPD4-210ENST00000441135 USP17L2Q6R6M4 530 aa21.85■■□□□ 1.09
SMPD4-210ENST00000441135 DDRGK1Q96HY6 314 aa21.85■■□□□ 1.09
SMPD4-210ENST00000441135 STRBPQ96SI9 672 aaKnown RBP21.85■■□□□ 1.09
SMPD4-210ENST00000441135 CENPFP49454 3210 aa21.84■■□□□ 1.09
SMPD4-210ENST00000441135 PDE4DIPQ5VU43 2346 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms