RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 MTA3Q9BTC8 594 aa20.18■□□□□ 0.82
SATB2-204ENST00000440919 NACAP1Q9BZK3 213 aa20.18■□□□□ 0.82
SATB2-204ENST00000440919 NFE2L3Q9Y4A8 694 aa20.18■□□□□ 0.82
SATB2-204ENST00000440919 SLC4A4Q9Y6R1 1079 aa20.18■□□□□ 0.82
SATB2-204ENST00000440919 MYH6P13533 1939 aa20.18■□□□□ 0.82
SATB2-204ENST00000440919 VWA3AA6NCI4 1184 aa20.18■□□□□ 0.82
SATB2-204ENST00000440919 ZSCAN12O43309 604 aa20.18■□□□□ 0.82
SATB2-204ENST00000440919 SLFN14P0C7P3 912 aa20.18■□□□□ 0.82
SATB2-204ENST00000440919 IL6STP40189 918 aaPredicted RBP20.18■□□□□ 0.82
SATB2-204ENST00000440919 RCAN1P53805 252 aa20.18■□□□□ 0.82
SATB2-204ENST00000440919 HSP90AA4PQ58FG1 418 aa20.18■□□□□ 0.82
SATB2-204ENST00000440919 ENOX1Q8TC92 643 aaKnown RBP20.18■□□□□ 0.82
SATB2-204ENST00000440919 TOMM22Q9NS69 142 aa20.18■□□□□ 0.82
SATB2-204ENST00000440919 CMTR1Q8N1G2 835 aaKnown RBP20.17■□□□□ 0.82
SATB2-204ENST00000440919 CCDC82Q8N4S0 544 aa20.17■□□□□ 0.82
SATB2-204ENST00000440919 SMARCE1Q969G3 411 aa20.17■□□□□ 0.82
SATB2-204ENST00000440919 DACH1Q9UI36 760 aa20.17■□□□□ 0.82
SATB2-204ENST00000440919 PPP2R2CQ9Y2T4 447 aa20.17■□□□□ 0.82
SATB2-204ENST00000440919 SRPRBQ9Y5M8 271 aaKnown RBP20.17■□□□□ 0.82
SATB2-204ENST00000440919 A0A0G2JS52 829 aa20.17■□□□□ 0.82
SATB2-204ENST00000440919 CCDC196A0A1B0GTZ2 297 aa20.17■□□□□ 0.82
SATB2-204ENST00000440919 ERICH2A1L162 156 aa20.17■□□□□ 0.82
SATB2-204ENST00000440919 ARHGAP29Q52LW3 1261 aa20.17■□□□□ 0.82
SATB2-204ENST00000440919 TRIML1Q8N9V2 468 aa20.17■□□□□ 0.82
SATB2-204ENST00000440919 ACSBG1Q96GR2 724 aa20.17■□□□□ 0.82
SATB2-204ENST00000440919 NGLY1Q96IV0 654 aa20.17■□□□□ 0.82
SATB2-204ENST00000440919 SRRTQ9BXP5 876 aaKnown RBP20.17■□□□□ 0.82
SATB2-204ENST00000440919 ACTN4O43707 911 aaKnown RBP20.16■□□□□ 0.82
SATB2-204ENST00000440919 CLCN6P51797 869 aa20.16■□□□□ 0.82
SATB2-204ENST00000440919 ZNF827Q17R98 1081 aa20.16■□□□□ 0.82
SATB2-204ENST00000440919 GRAMD1CQ8IYS0 662 aa20.16■□□□□ 0.82
SATB2-204ENST00000440919 TMTC2Q8N394 836 aa20.16■□□□□ 0.82
SATB2-204ENST00000440919 TC2NQ8N9U0 490 aa20.16■□□□□ 0.82
SATB2-204ENST00000440919 FANCBQ8NB91 859 aa20.16■□□□□ 0.82
SATB2-204ENST00000440919 OXER1Q8TDS5 423 aa20.16■□□□□ 0.82
SATB2-204ENST00000440919 MPHOSPH8Q99549 860 aa20.16■□□□□ 0.82
SATB2-204ENST00000440919 BAG1Q99933 345 aaPredicted RBP20.16■□□□□ 0.82
SATB2-204ENST00000440919 PARP3Q9Y6F1 533 aa20.16■□□□□ 0.82
SATB2-204ENST00000440919 SPECC1LQ69YQ0 1117 aa20.15■□□□□ 0.82
SATB2-204ENST00000440919 ZNF654Q8IZM8 581 aa20.15■□□□□ 0.82
SATB2-204ENST00000440919 SPATA20Q8TB22 786 aa20.15■□□□□ 0.82
SATB2-204ENST00000440919 C8orf37Q96NL8 207 aa20.15■□□□□ 0.82
SATB2-204ENST00000440919 MED15Q96RN5 788 aa20.15■□□□□ 0.82
SATB2-204ENST00000440919 NOL10Q9BSC4 688 aaKnown RBP20.15■□□□□ 0.82
SATB2-204ENST00000440919 SEC31BQ9NQW1 1179 aa20.15■□□□□ 0.82
SATB2-204ENST00000440919 CEP131Q9UPN4 1083 aa20.15■□□□□ 0.82
SATB2-204ENST00000440919 STX10O60499 249 aa20.15■□□□□ 0.82
SATB2-204ENST00000440919 BCAMP50895 628 aa20.15■□□□□ 0.82
SATB2-204ENST00000440919 TERF2Q15554 542 aa20.15■□□□□ 0.82
SATB2-204ENST00000440919 TRMT44Q8IYL2 757 aaKnown RBP20.15■□□□□ 0.82
SATB2-204ENST00000440919 RNF41Q9H4P4 317 aaPredicted RBP20.15■□□□□ 0.82
SATB2-204ENST00000440919 TADA3O75528 432 aa20.14■□□□□ 0.81
SATB2-204ENST00000440919 URI1O94763 535 aaPredicted RBP20.14■□□□□ 0.81
SATB2-204ENST00000440919 SUSD4Q5VX71 490 aa20.14■□□□□ 0.81
SATB2-204ENST00000440919 KANK3Q6NY19 840 aa20.14■□□□□ 0.81
SATB2-204ENST00000440919 ZNF771Q7L3S4 317 aaPredicted RBP20.14■□□□□ 0.81
SATB2-204ENST00000440919 MIGA1Q8NAN2 632 aa20.14■□□□□ 0.81
SATB2-204ENST00000440919 CDK11BP21127 795 aaKnown RBP20.14■□□□□ 0.81
SATB2-204ENST00000440919 BMS1Q14692 1282 aaKnown RBP20.14■□□□□ 0.81
SATB2-204ENST00000440919 VPS72Q15906 364 aa20.14■□□□□ 0.81
SATB2-204ENST00000440919 USP49Q70CQ1 688 aa20.14■□□□□ 0.81
SATB2-204ENST00000440919 PDILTQ8N807 584 aa20.14■□□□□ 0.81
SATB2-204ENST00000440919 NUP133Q8WUM0 1156 aa20.14■□□□□ 0.81
SATB2-204ENST00000440919 UBXN4Q92575 508 aa20.14■□□□□ 0.81
SATB2-204ENST00000440919 CSRNP2Q9H175 543 aa20.14■□□□□ 0.81
SATB2-204ENST00000440919 FHOD1Q9Y613 1164 aa20.14■□□□□ 0.81
SATB2-204ENST00000440919 GOLGA6L9A6NEM1 432 aa20.13■□□□□ 0.81
SATB2-204ENST00000440919 PPARAQ07869 468 aa20.13■□□□□ 0.81
SATB2-204ENST00000440919 SHISA4Q96DD7 197 aa20.13■□□□□ 0.81
SATB2-204ENST00000440919 CABP5Q9NP86 173 aa20.13■□□□□ 0.81
SATB2-204ENST00000440919 PLCD1P51178 756 aa20.12■□□□□ 0.81
SATB2-204ENST00000440919 ADKP55263 362 aaKnown RBP20.12■□□□□ 0.81
SATB2-204ENST00000440919 MNS1Q8NEH6 495 aa20.12■□□□□ 0.81
SATB2-204ENST00000440919 UBAC1Q9BSL1 405 aa20.12■□□□□ 0.81
SATB2-204ENST00000440919 RNF26Q9BY78 433 aaPredicted RBP20.12■□□□□ 0.81
SATB2-204ENST00000440919 SAMSN1Q9NSI8 373 aaKnown RBP20.12■□□□□ 0.81
SATB2-204ENST00000440919 EFCAB8A8MWE9 144 aa20.12■□□□□ 0.81
SATB2-204ENST00000440919 ATP6V1AP38606 617 aa20.12■□□□□ 0.81
SATB2-204ENST00000440919 SEC23AQ15436 765 aa20.12■□□□□ 0.81
SATB2-204ENST00000440919 FAM98CQ17RN3 349 aaKnown RBP20.12■□□□□ 0.81
SATB2-204ENST00000440919 TOGARAM2Q6ZUX3 1019 aa20.12■□□□□ 0.81
SATB2-204ENST00000440919 CARD6Q9BX69 1037 aa20.12■□□□□ 0.81
SATB2-204ENST00000440919 RAI14Q9P0K7 980 aa20.12■□□□□ 0.81
SATB2-204ENST00000440919 BCL9LQ86UU0 1499 aa20.12■□□□□ 0.81
SATB2-204ENST00000440919 ATP2B1P20020 1258 aa20.11■□□□□ 0.81
SATB2-204ENST00000440919 ERCC5P28715 1186 aaPredicted RBP20.11■□□□□ 0.81
SATB2-204ENST00000440919 NR1I3Q14994 352 aa20.11■□□□□ 0.81
SATB2-204ENST00000440919 LRP2BPQ9P2M1 347 aa20.11■□□□□ 0.81
SATB2-204ENST00000440919 TNKSO95271 1327 aa20.11■□□□□ 0.81
SATB2-204ENST00000440919 LOC102724428A0A0B4J2F2 783 aa20.11■□□□□ 0.81
SATB2-204ENST00000440919 EIF5P55010 431 aaKnown RBP20.11■□□□□ 0.81
SATB2-204ENST00000440919 SIK1P57059 783 aa20.11■□□□□ 0.81
SATB2-204ENST00000440919 ADGRA1Q86SQ6 560 aa20.11■□□□□ 0.81
SATB2-204ENST00000440919 WDR24Q96S15 920 aa20.11■□□□□ 0.81
SATB2-204ENST00000440919 AATFQ9NY61 560 aaKnown RBP eCLIP20.11■□□□□ 0.81
SATB2-204ENST00000440919 RTL9Q8NET4 1388 aa20.1■□□□□ 0.81
SATB2-204ENST00000440919 A0A1B0GTH6 734 aa20.1■□□□□ 0.81
SATB2-204ENST00000440919 ZRANB2O95218 330 aaKnown RBP eCLIP20.1■□□□□ 0.81
SATB2-204ENST00000440919 PPP2R5BQ15173 497 aa20.1■□□□□ 0.81
SATB2-204ENST00000440919 FAM177A1Q8N128 213 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms