RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 CHD4Q14839 1912 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 RPAP1Q9BWH6 1393 aaPredicted RBP5.95□□□□□ -1.46
CCDC140-202ENST00000440903 DDNO94850 711 aaPredicted RBP5.95□□□□□ -1.46
CCDC140-202ENST00000440903 MBD4O95243 580 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 USP5P45974 858 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 TDO2P48775 406 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 RPIAP49247 311 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 SCNN1DP51172 638 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 NMIQ13287 307 aaPredicted RBP5.95□□□□□ -1.46
CCDC140-202ENST00000440903 DIXDC1Q155Q3 683 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 CFAP100Q494V2 611 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 CWC27Q6UX04 472 aaKnown RBP5.95□□□□□ -1.46
CCDC140-202ENST00000440903 TEX11Q8IYF3 940 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 NSUN4Q96CB9 384 aaKnown RBP5.95□□□□□ -1.46
CCDC140-202ENST00000440903 HOOK2Q96ED9 719 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 EDC3Q96F86 508 aaKnown RBP5.95□□□□□ -1.46
CCDC140-202ENST00000440903 SPSB2Q99619 263 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 ANTXR1Q9H6X2 564 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 VEZTQ9HBM0 779 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 GPBP1L1Q9HC44 474 aaPredicted RBP5.95□□□□□ -1.46
CCDC140-202ENST00000440903 MYOZ2Q9NPC6 264 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 GPRC5DQ9NZD1 345 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 CNOT7Q9UIV1 285 aaKnown RBP5.95□□□□□ -1.46
CCDC140-202ENST00000440903 DAGLAQ9Y4D2 1042 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 GAKO14976 1311 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 CCDC171Q6TFL3 1326 aa5.95□□□□□ -1.46
CCDC140-202ENST00000440903 SBF1O95248 1867 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 MYH7P12883 1935 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 AKAP11Q9UKA4 1901 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 TERTO14746 1132 aaKnown RBP5.94□□□□□ -1.46
CCDC140-202ENST00000440903 GPAA1O43292 621 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 APPP05067 770 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 HLA-DOAP06340 250 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 SLC3A2P08195 630 aaKnown RBP5.94□□□□□ -1.46
CCDC140-202ENST00000440903 EPHX2P34913 555 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 NF2P35240 595 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 SMCPP49901 116 aaPredicted RBP5.94□□□□□ -1.46
CCDC140-202ENST00000440903 PRELPP51888 382 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 ZNF280AP59817 542 aaPredicted RBP5.94□□□□□ -1.46
CCDC140-202ENST00000440903 MCMDC2Q4G0Z9 681 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 TBC1D10BQ4KMP7 808 aaPredicted RBP5.94□□□□□ -1.46
CCDC140-202ENST00000440903 EAPPQ56P03 285 aaPredicted RBP5.94□□□□□ -1.46
CCDC140-202ENST00000440903 ZMYM1Q5SVZ6 1142 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 RBM26Q5T8P6 1007 aaKnown RBP5.94□□□□□ -1.46
CCDC140-202ENST00000440903 RNF20Q5VTR2 975 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 USP50Q70EL3 339 aaPredicted RBP5.94□□□□□ -1.46
CCDC140-202ENST00000440903 SULF1Q8IWU6 871 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 SCUBE3Q8IX30 993 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 CERS5Q8N5B7 392 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 MIGA1Q8NAN2 632 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 DCPSQ96C86 337 aaKnown RBP5.94□□□□□ -1.46
CCDC140-202ENST00000440903 ZDHHC15Q96MV8 337 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 MXD3Q9BW11 206 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 MRIQ9BWK5 157 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 NAPBQ9H115 298 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 ANO2Q9NQ90 1003 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 AATFQ9NY61 560 aaKnown RBP eCLIP5.94□□□□□ -1.46
CCDC140-202ENST00000440903 ARPP21Q9UBL0 812 aaPredicted RBP5.94□□□□□ -1.46
CCDC140-202ENST00000440903 CTNNA3Q9UI47 895 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 SCN4AP35499 1836 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 WDR90Q96KV7 1748 aa5.94□□□□□ -1.46
CCDC140-202ENST00000440903 SCN9AQ15858 1988 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 GPR75-ASB3A0A0A6YYF3 556 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 A0A0D9SFI3 127 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 RCCD1A6NED2 376 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 VEGFAP15692 232 aaPredicted RBP5.93□□□□□ -1.46
CCDC140-202ENST00000440903 CHMLP26374 656 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 PICALMQ13492 652 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 PUS10Q3MIT2 529 aaKnown RBP5.93□□□□□ -1.46
CCDC140-202ENST00000440903 SKAP1Q86WV1 359 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 ZSCAN29Q8IWY8 852 aaPredicted RBP5.93□□□□□ -1.46
CCDC140-202ENST00000440903 MTMR14Q8NCE2 650 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 ZNF526Q8TF50 670 aaPredicted RBP5.93□□□□□ -1.46
CCDC140-202ENST00000440903 ESYT1Q9BSJ8 1104 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 ARMT1Q9H993 441 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 ZNF287Q9HBT7 754 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 KCNQ5Q9NR82 932 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 ATP8A2Q9NTI2 1148 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 USP40Q9NVE5 1235 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 GGA3Q9NZ52 723 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 FCF1Q9Y324 198 aaKnown RBP5.93□□□□□ -1.46
CCDC140-202ENST00000440903 PPP2R3BQ9Y5P8 575 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 SLC4A4Q9Y6R1 1079 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 PITPNM2Q9BZ72 1349 aa5.93□□□□□ -1.46
CCDC140-202ENST00000440903 NAV1Q8NEY1 1877 aa5.92□□□□□ -1.46
CCDC140-202ENST00000440903 COL2A1P02458 1487 aaPredicted RBP5.92□□□□□ -1.46
CCDC140-202ENST00000440903 TCRBV5S4A2TA0A5A2 114 aa5.92□□□□□ -1.46
CCDC140-202ENST00000440903 CLRN2A0PK11 232 aa5.92□□□□□ -1.46
CCDC140-202ENST00000440903 SGSM2O43147 1006 aa5.92□□□□□ -1.46
CCDC140-202ENST00000440903 EPB41L2O43491 1005 aaKnown RBP5.92□□□□□ -1.46
CCDC140-202ENST00000440903 ENTPD3O75355 529 aa5.92□□□□□ -1.46
CCDC140-202ENST00000440903 POLR3DP05423 398 aaPredicted RBP5.92□□□□□ -1.46
CCDC140-202ENST00000440903 SNRPBP14678 240 aaKnown RBP5.92□□□□□ -1.46
CCDC140-202ENST00000440903 ZKSCAN1P17029 563 aaPredicted RBP5.92□□□□□ -1.46
CCDC140-202ENST00000440903 YY1P25490 414 aa5.92□□□□□ -1.46
CCDC140-202ENST00000440903 NT5C2P49902 561 aa5.92□□□□□ -1.46
CCDC140-202ENST00000440903 IMMTQ16891 758 aaKnown RBP5.92□□□□□ -1.46
CCDC140-202ENST00000440903 FKBP1CQ5VVH2 108 aa5.92□□□□□ -1.46
CCDC140-202ENST00000440903 GIMAP6Q6P9H5 292 aa5.92□□□□□ -1.46
CCDC140-202ENST00000440903 TTC6Q86TZ1 520 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms