RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 DPF3Q92784 378 aa14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 HTATIP2Q9BUP3 242 aa14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 SAP30BPQ9UHR5 308 aaKnown RBP14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 EXOC6BQ9Y2D4 811 aa14.18□□□□□ -0.14
UBE2D4-204ENST00000440899 MGAMO43451 1857 aa14.17□□□□□ -0.14
UBE2D4-204ENST00000440899 IRX3P78415 501 aaPredicted RBP14.17□□□□□ -0.14
UBE2D4-204ENST00000440899 AACSQ86V21 672 aa14.17□□□□□ -0.14
UBE2D4-204ENST00000440899 MIGA1Q8NAN2 632 aa14.17□□□□□ -0.14
UBE2D4-204ENST00000440899 PANK1Q8TE04 598 aa14.17□□□□□ -0.14
UBE2D4-204ENST00000440899 MORF4L1Q9UBU8 362 aa14.17□□□□□ -0.14
UBE2D4-204ENST00000440899 TAOK2Q9UL54 1235 aa14.17□□□□□ -0.14
UBE2D4-204ENST00000440899 COLQQ9Y215 455 aaPredicted RBP14.17□□□□□ -0.14
UBE2D4-204ENST00000440899 RANBP2P49792 3224 aaKnown RBP14.16□□□□□ -0.14
UBE2D4-204ENST00000440899 FARP2O94887 1054 aaPredicted RBP14.16□□□□□ -0.14
UBE2D4-204ENST00000440899 GDF11O95390 407 aa14.16□□□□□ -0.14
UBE2D4-204ENST00000440899 TFRCP02786 760 aaKnown RBP14.16□□□□□ -0.14
UBE2D4-204ENST00000440899 USP5P45974 858 aa14.16□□□□□ -0.14
UBE2D4-204ENST00000440899 MAGEB6Q8N7X4 407 aa14.16□□□□□ -0.14
UBE2D4-204ENST00000440899 ZBTB21Q9ULJ3 1066 aa14.16□□□□□ -0.14
UBE2D4-204ENST00000440899 NDUFB9Q9Y6M9 179 aa14.16□□□□□ -0.14
UBE2D4-204ENST00000440899 MAST2Q6P0Q8 1798 aa14.16□□□□□ -0.14
UBE2D4-204ENST00000440899 LOC285556D6RIA3 1793 aa14.15□□□□□ -0.14
UBE2D4-204ENST00000440899 DEFB118Q96PH6 123 aa14.15□□□□□ -0.14
UBE2D4-204ENST00000440899 P2RX7Q99572 595 aaKnown RBP14.15□□□□□ -0.14
UBE2D4-204ENST00000440899 ANTXR1Q9H6X2 564 aa14.15□□□□□ -0.14
UBE2D4-204ENST00000440899 PAK6Q9NQU5 681 aaPredicted RBP14.15□□□□□ -0.14
UBE2D4-204ENST00000440899 GJD2Q9UKL4 321 aa14.15□□□□□ -0.14
UBE2D4-204ENST00000440899 NR2E3Q9Y5X4 410 aa14.15□□□□□ -0.14
UBE2D4-204ENST00000440899 ATAD5Q96QE3 1844 aa14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 HMGCRP04035 888 aa14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 HERVK_113P62684 666 aa14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 TTF1Q15361 905 aaPredicted RBP14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 SHROOM1Q2M3G4 852 aaPredicted RBP14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 TATDN1Q6P1N9 297 aa14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 TTC6Q86TZ1 520 aa14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 RPAP2Q8IXW5 612 aaPredicted RBP14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 RHPN1Q8TCX5 695 aa14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 EHD4Q9H223 541 aa14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 IL1RAPL2Q9NP60 686 aa14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 SERPINB13Q9UIV8 391 aa14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 DOCK3Q8IZD9 2030 aa14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 TRIOBPQ9H2D6 2365 aa14.14□□□□□ -0.15
UBE2D4-204ENST00000440899 SIPA1L1O43166 1804 aa14.13□□□□□ -0.15
UBE2D4-204ENST00000440899 HMMRO75330 724 aa14.13□□□□□ -0.15
UBE2D4-204ENST00000440899 GH2P01242 217 aa14.13□□□□□ -0.15
UBE2D4-204ENST00000440899 FXR1P51114 621 aaKnown RBP eCLIP14.13□□□□□ -0.15
UBE2D4-204ENST00000440899 USP17L2Q6R6M4 530 aa14.13□□□□□ -0.15
UBE2D4-204ENST00000440899 CLASRPQ8N2M8 674 aaKnown RBP14.13□□□□□ -0.15
UBE2D4-204ENST00000440899 GPRC5AQ8NFJ5 357 aa14.13□□□□□ -0.15
UBE2D4-204ENST00000440899 GTF3C2Q8WUA4 911 aaPredicted RBP14.13□□□□□ -0.15
UBE2D4-204ENST00000440899 KIF1BPQ96EK5 621 aa14.13□□□□□ -0.15
UBE2D4-204ENST00000440899 CRISPLD2Q9H0B8 497 aa14.13□□□□□ -0.15
UBE2D4-204ENST00000440899 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.13□□□□□ -0.15
UBE2D4-204ENST00000440899 EMILIN3Q9NT22 766 aa14.13□□□□□ -0.15
UBE2D4-204ENST00000440899 MYO5AQ9Y4I1 1855 aaKnown RBP14.12□□□□□ -0.15
UBE2D4-204ENST00000440899 MAPK4P31152 587 aa14.12□□□□□ -0.15
UBE2D4-204ENST00000440899 CERKLQ49MI3 558 aaPredicted RBP14.12□□□□□ -0.15
UBE2D4-204ENST00000440899 SLC9C2Q5TAH2 1124 aa14.12□□□□□ -0.15
UBE2D4-204ENST00000440899 RIOK1Q9BRS2 568 aaKnown RBP14.12□□□□□ -0.15
UBE2D4-204ENST00000440899 TXNRD2Q9NNW7 524 aa14.12□□□□□ -0.15
UBE2D4-204ENST00000440899 RBPJLQ9UBG7 517 aa14.12□□□□□ -0.15
UBE2D4-204ENST00000440899 DDX19BQ9UMR2 479 aa14.12□□□□□ -0.15
UBE2D4-204ENST00000440899 RPTORQ8N122 1335 aa14.12□□□□□ -0.15
UBE2D4-204ENST00000440899 FOCADQ5VW36 1801 aa14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 MAGEB6P1A0A0J9YX57 407 aa14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 IFIT2P09913 472 aaKnown RBP14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 XRCC5P13010 732 aaKnown RBP14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 USP14P54578 494 aa14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 ERVK-9P63128 1117 aa14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 ERVK-24P63145 666 aa14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 CHRDL2Q6WN34 429 aa14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 CCAR1Q8IX12 1150 aaKnown RBP14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 C12orf42Q96LP6 360 aa14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 CDK5RAP2Q96SN8 1893 aa14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 FEZ1Q99689 392 aa14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 NUDT12Q9BQG2 462 aa14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 CRNKL1Q9BZJ0 848 aaKnown RBP14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 CHMP4BQ9H444 224 aaKnown RBP14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 HMX1Q9NP08 348 aaPredicted RBP14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 CABP5Q9NP86 173 aa14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 ZBTB40Q9NUA8 1239 aa14.11□□□□□ -0.15
UBE2D4-204ENST00000440899 USP17L15C9J2P7 530 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 USP17L13C9JLJ4 530 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 USP17L11C9JVI0 530 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 USP17L18D6R9N7 530 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 USP17L22D6RA61 530 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 USP17L17D6RBQ6 530 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 USP17L19D6RCP7 530 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 USP17L20D6RJB6 530 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 APBB1O00213 710 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 EVI5O60447 810 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 PEX10O60683 326 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 RAB11FIP3O75154 756 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 POLR3DP05423 398 aaPredicted RBP14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 PDE6AP16499 860 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 PLCD1P51178 756 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 USP17L24Q0WX57 530 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 PDE3AQ14432 1141 aa14.1□□□□□ -0.15
UBE2D4-204ENST00000440899 RAB3GAP1Q15042 981 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms