RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 PDHXO00330 501 aa28.45■■■□□ 2.14
VARS-217ENST00000440048 SPP2Q13103 211 aa28.45■■■□□ 2.14
VARS-217ENST00000440048 LRRFIP1Q32MZ4 808 aaKnown RBP28.45■■■□□ 2.14
VARS-217ENST00000440048 FASTKD5Q7L8L6 764 aaKnown RBP28.45■■■□□ 2.14
VARS-217ENST00000440048 CHD1LQ86WJ1 897 aa28.45■■■□□ 2.14
VARS-217ENST00000440048 ZNF280CQ8ND82 737 aa28.45■■■□□ 2.14
VARS-217ENST00000440048 FSD1Q9BTV5 496 aa28.45■■■□□ 2.14
VARS-217ENST00000440048 GINM1Q9NU53 330 aa28.45■■■□□ 2.14
VARS-217ENST00000440048 SLC4A4Q9Y6R1 1079 aa28.45■■■□□ 2.14
VARS-217ENST00000440048 CYP2D6P10635 497 aa28.44■■■□□ 2.14
VARS-217ENST00000440048 GADL1Q6ZQY3 521 aa28.44■■■□□ 2.14
VARS-217ENST00000440048 STRBPQ96SI9 672 aaKnown RBP28.44■■■□□ 2.14
VARS-217ENST00000440048 ZBTB21Q9ULJ3 1066 aa28.44■■■□□ 2.14
VARS-217ENST00000440048 GABPAQ06546 454 aa28.43■■■□□ 2.14
VARS-217ENST00000440048 AS3MTQ9HBK9 375 aa28.43■■■□□ 2.14
VARS-217ENST00000440048 TLR2O60603 784 aa28.42■■■□□ 2.14
VARS-217ENST00000440048 SHMT1P34896 483 aa28.42■■■□□ 2.14
VARS-217ENST00000440048 SP3Q02447 781 aa28.42■■■□□ 2.14
VARS-217ENST00000440048 WDR18Q9BV38 432 aa28.42■■■□□ 2.14
VARS-217ENST00000440048 GH2P01242 217 aa28.41■■■□□ 2.14
VARS-217ENST00000440048 CERKLQ49MI3 558 aaPredicted RBP28.41■■■□□ 2.14
VARS-217ENST00000440048 DDRGK1Q96HY6 314 aa28.41■■■□□ 2.14
VARS-217ENST00000440048 M0R2C6 588 aa28.4■■■□□ 2.14
VARS-217ENST00000440048 GPAA1O43292 621 aa28.4■■■□□ 2.14
VARS-217ENST00000440048 EVI5LQ96CN4 794 aa28.4■■■□□ 2.14
VARS-217ENST00000440048 ERO1AQ96HE7 468 aa28.4■■■□□ 2.14
VARS-217ENST00000440048 LOC285556D6RIA3 1793 aa28.39■■■□□ 2.14
VARS-217ENST00000440048 CYP2D7A0A087X1C5 515 aa28.39■■■□□ 2.14
VARS-217ENST00000440048 USP17L12C9JPN9 530 aa28.39■■■□□ 2.14
VARS-217ENST00000440048 USP17L21D6R901 530 aa28.39■■■□□ 2.14
VARS-217ENST00000440048 C12orf60Q5U649 245 aa28.39■■■□□ 2.14
VARS-217ENST00000440048 CD99L2Q8TCZ2 262 aa28.39■■■□□ 2.14
VARS-217ENST00000440048 MYH8P13535 1937 aa28.39■■■□□ 2.13
VARS-217ENST00000440048 GSG1L2A8MUP6 293 aa28.38■■■□□ 2.13
VARS-217ENST00000440048 HMGCS2P54868 508 aa28.38■■■□□ 2.13
VARS-217ENST00000440048 ABCB5Q2M3G0 1257 aa28.38■■■□□ 2.13
VARS-217ENST00000440048 PLEKHM2Q8IWE5 1019 aa28.38■■■□□ 2.13
VARS-217ENST00000440048 PROCA1Q8NCQ7 364 aaPredicted RBP28.38■■■□□ 2.13
VARS-217ENST00000440048 DYNLL2Q96FJ2 89 aa28.38■■■□□ 2.13
VARS-217ENST00000440048 SEC62Q99442 399 aaKnown RBP28.38■■■□□ 2.13
VARS-217ENST00000440048 PARK7Q99497 189 aaKnown RBP28.38■■■□□ 2.13
VARS-217ENST00000440048 AGTPBP1Q9UPW5 1226 aa28.38■■■□□ 2.13
VARS-217ENST00000440048 SLC45A1Q9Y2W3 748 aa28.38■■■□□ 2.13
VARS-217ENST00000440048 ADGRA2Q96PE1 1338 aa28.38■■■□□ 2.13
VARS-217ENST00000440048 SMIM22K7EJ46 135 aa28.37■■■□□ 2.13
VARS-217ENST00000440048 SH3D19Q5HYK7 790 aa28.37■■■□□ 2.13
VARS-217ENST00000440048 ZMYM1Q5SVZ6 1142 aa28.37■■■□□ 2.13
VARS-217ENST00000440048 TREML2Q5T2D2 321 aa28.37■■■□□ 2.13
VARS-217ENST00000440048 CTR9Q6PD62 1173 aa28.37■■■□□ 2.13
VARS-217ENST00000440048 C17orf99Q6UX52 265 aa28.37■■■□□ 2.13
VARS-217ENST00000440048 AMOTL1Q8IY63 956 aa28.37■■■□□ 2.13
VARS-217ENST00000440048 SLC44A5Q8NCS7 719 aa28.37■■■□□ 2.13
VARS-217ENST00000440048 CYP2C8P10632 490 aa28.36■■■□□ 2.13
VARS-217ENST00000440048 BACE1P56817 501 aa28.36■■■□□ 2.13
VARS-217ENST00000440048 CAP1Q01518 475 aa28.36■■■□□ 2.13
VARS-217ENST00000440048 MTMR2Q13614 643 aa28.36■■■□□ 2.13
VARS-217ENST00000440048 SWAP70Q9UH65 585 aa28.36■■■□□ 2.13
VARS-217ENST00000440048 CPA4Q9UI42 421 aa28.36■■■□□ 2.13
VARS-217ENST00000440048 TAOK2Q9UL54 1235 aa28.36■■■□□ 2.13
VARS-217ENST00000440048 GNAT2P19087 354 aa28.35■■■□□ 2.13
VARS-217ENST00000440048 GIMAP6Q6P9H5 292 aa28.35■■■□□ 2.13
VARS-217ENST00000440048 OSBPL3Q9H4L5 887 aa28.35■■■□□ 2.13
VARS-217ENST00000440048 CABP5Q9NP86 173 aa28.35■■■□□ 2.13
VARS-217ENST00000440048 TRIM17Q9Y577 477 aa28.35■■■□□ 2.13
VARS-217ENST00000440048 USP17L10C9JJH3 530 aa28.34■■■□□ 2.13
VARS-217ENST00000440048 RGS19P49795 217 aa28.34■■■□□ 2.13
VARS-217ENST00000440048 RAB3GAP1Q15042 981 aa28.34■■■□□ 2.13
VARS-217ENST00000440048 FBXO46Q6PJ61 603 aaPredicted RBP28.34■■■□□ 2.13
VARS-217ENST00000440048 OTOP1Q7RTM1 612 aa28.34■■■□□ 2.13
VARS-217ENST00000440048 ARPP21Q9UBL0 812 aaPredicted RBP28.34■■■□□ 2.13
VARS-217ENST00000440048 C19orf81C9J6K1 198 aa28.33■■■□□ 2.13
VARS-217ENST00000440048 GUCY1A2P33402 732 aa28.33■■■□□ 2.13
VARS-217ENST00000440048 SBK1Q52WX2 424 aa28.33■■■□□ 2.13
VARS-217ENST00000440048 EPB41L4AQ9HCS5 686 aaPredicted RBP28.33■■■□□ 2.13
VARS-217ENST00000440048 TRIM6-TRIM34B2RNG4 842 aa28.32■■■□□ 2.12
VARS-217ENST00000440048 PATL2C9JE40 543 aaKnown RBP28.32■■■□□ 2.12
VARS-217ENST00000440048 CDK8P49336 464 aa28.32■■■□□ 2.12
VARS-217ENST00000440048 C16orf86Q6ZW13 317 aa28.32■■■□□ 2.12
VARS-217ENST00000440048 EFCC1Q9HA90 598 aa28.32■■■□□ 2.12
VARS-217ENST00000440048 TMOD4Q9NZQ9 345 aa28.32■■■□□ 2.12
VARS-217ENST00000440048 ZSWIM8A7E2V4 1837 aa28.32■■■□□ 2.12
VARS-217ENST00000440048 MPHOSPH10O00566 681 aaKnown RBP28.31■■■□□ 2.12
VARS-217ENST00000440048 APPP05067 770 aa28.31■■■□□ 2.12
VARS-217ENST00000440048 LACTBP83111 547 aaPredicted RBP28.31■■■□□ 2.12
VARS-217ENST00000440048 SEPT2Q15019 361 aa28.31■■■□□ 2.12
VARS-217ENST00000440048 ARHGEF6Q15052 776 aa28.31■■■□□ 2.12
VARS-217ENST00000440048 HPS5Q9UPZ3 1129 aa28.31■■■□□ 2.12
VARS-217ENST00000440048 BCRP11274 1271 aa28.3■■■□□ 2.12
VARS-217ENST00000440048 PABPC4Q13310 644 aaKnown RBP eCLIP28.3■■■□□ 2.12
VARS-217ENST00000440048 RILPL2Q969X0 211 aa28.3■■■□□ 2.12
VARS-217ENST00000440048 PNMA3Q9UL41 463 aa28.3■■■□□ 2.12
VARS-217ENST00000440048 HTTP42858 3142 aa28.29■■■□□ 2.12
VARS-217ENST00000440048 MINDY4BA8MYZ0 360 aa28.29■■■□□ 2.12
VARS-217ENST00000440048 TDO2P48775 406 aa28.29■■■□□ 2.12
VARS-217ENST00000440048 KIF22Q14807 665 aa28.29■■■□□ 2.12
VARS-217ENST00000440048 USP17L2Q6R6M4 530 aa28.29■■■□□ 2.12
VARS-217ENST00000440048 CCDC129Q6ZRS4 1044 aa28.29■■■□□ 2.12
VARS-217ENST00000440048 TICAM2Q86XR7 235 aa28.29■■■□□ 2.12
VARS-217ENST00000440048 IFNL3Q8IZI9 196 aa28.29■■■□□ 2.12
VARS-217ENST00000440048 ACER1Q8TDN7 264 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms