RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 BMP6P22004 513 aa10.24□□□□□ -0.77
COPB1-202ENST00000439561 GUCY1A2P33402 732 aa10.24□□□□□ -0.77
COPB1-202ENST00000439561 CCT5P48643 541 aa10.24□□□□□ -0.77
COPB1-202ENST00000439561 STIM1Q13586 685 aa10.24□□□□□ -0.77
COPB1-202ENST00000439561 RSRC2Q7L4I2 434 aaKnown RBP10.24□□□□□ -0.77
COPB1-202ENST00000439561 NACAP1Q9BZK3 213 aa10.24□□□□□ -0.77
COPB1-202ENST00000439561 HSD3B7Q9H2F3 369 aa10.24□□□□□ -0.77
COPB1-202ENST00000439561 JRKLQ9Y4A0 524 aa10.24□□□□□ -0.77
COPB1-202ENST00000439561 UTYO14607 1347 aa10.24□□□□□ -0.77
COPB1-202ENST00000439561 C3P01024 1663 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 ZEB2O60315 1214 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 RANBP6O60518 1105 aaKnown RBP10.23□□□□□ -0.77
COPB1-202ENST00000439561 KIAA0754O94854 1291 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 MBD4O95243 580 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 SLC4A8Q2Y0W8 1093 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 FAM71BQ8TC56 605 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 PPM1EQ8WY54 764 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 ARMT1Q9H993 441 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 GNL3LQ9NVN8 582 aaKnown RBP10.23□□□□□ -0.77
COPB1-202ENST00000439561 TRIM10Q9UDY6 481 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 TFR2Q9UP52 801 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 ADAMTS13Q76LX8 1427 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 XRN1Q8IZH2 1706 aaKnown RBP10.23□□□□□ -0.77
COPB1-202ENST00000439561 TRIM21P19474 475 aaKnown RBP10.23□□□□□ -0.77
COPB1-202ENST00000439561 BEND6Q5SZJ8 279 aaPredicted RBP10.23□□□□□ -0.77
COPB1-202ENST00000439561 SPATA1Q5VX52 437 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 KRT28Q7Z3Y7 464 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 MAGEB6Q8N7X4 407 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 KIFC2Q96AC6 838 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 LRP2BPQ9P2M1 347 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 SPATA31D1Q6ZQQ2 1576 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 EBAG9O00559 213 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 MFAP3LO75121 409 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 FXR1P51114 621 aaKnown RBP eCLIP10.23□□□□□ -0.771e-6■■■■■ 27.7
COPB1-202ENST00000439561 CYP26C1Q6V0L0 522 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 KIF6Q6ZMV9 814 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 FAM76AQ8TAV0 307 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 TEX13AQ9BXU3 409 aaPredicted RBP10.23□□□□□ -0.77
COPB1-202ENST00000439561 AGXT2Q9BYV1 514 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 ANKZF1Q9H8Y5 726 aa10.23□□□□□ -0.77
COPB1-202ENST00000439561 CCDC196A0A1B0GTZ2 297 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 SH2B2O14492 632 aaPredicted RBP10.22□□□□□ -0.77
COPB1-202ENST00000439561 PHKG2P15735 406 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 ERCC3P19447 782 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 PTPAQ15257 358 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 RNF187Q5TA31 235 aaPredicted RBP10.22□□□□□ -0.77
COPB1-202ENST00000439561 TMTC1Q8IUR5 882 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 OXER1Q8TDS5 423 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 TRIM47Q96LD4 638 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 PLEKHG1Q9ULL1 1385 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 TECPR2O15040 1411 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 GOLGA6CA6NDK9 693 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 MYO1BO43795 1136 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 GOLGA6DP0CG33 693 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 MCM7P33993 719 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 WHAMMP3Q1A5X7 153 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 RABL6Q3YEC7 729 aaPredicted RBP10.22□□□□□ -0.77
COPB1-202ENST00000439561 ICE2Q659A1 982 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 ARHGEF25Q86VW2 580 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 TMEM139Q8IV31 216 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 TMEM87BQ96K49 555 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 GOLGA6AQ9NYA3 693 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 MKRN1Q9UHC7 482 aaKnown RBP10.22□□□□□ -0.77
COPB1-202ENST00000439561 LUC7L2Q9Y383 392 aaKnown RBP10.22□□□□□ -0.77
COPB1-202ENST00000439561 SLC4A4Q9Y6R1 1079 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 UBN2Q6ZU65 1347 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 ANKARQ7Z5J8 1434 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 PTPRUQ92729 1446 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 ABL1P00519 1130 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 IDEP14735 1019 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 FOXO4P98177 505 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 ENOX2Q16206 610 aaKnown RBP10.22□□□□□ -0.77
COPB1-202ENST00000439561 CCDC96Q2M329 555 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 PAXIP1Q6ZW49 1069 aaPredicted RBP10.22□□□□□ -0.77
COPB1-202ENST00000439561 SND1Q7KZF4 910 aaKnown RBP eCLIP10.22□□□□□ -0.779e-7■■□□□ 14
COPB1-202ENST00000439561 SYMPKQ92797 1274 aaKnown RBP10.22□□□□□ -0.77
COPB1-202ENST00000439561 DDX17Q92841 729 aaKnown RBP10.22□□□□□ -0.77
COPB1-202ENST00000439561 PANX2Q96RD6 677 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 NAA15Q9BXJ9 866 aaKnown RBP10.22□□□□□ -0.77
COPB1-202ENST00000439561 EFCC1Q9HA90 598 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 POLD4Q9HCU8 107 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 ZSWIM5Q9P217 1185 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 HPSEQ9Y251 543 aa10.22□□□□□ -0.77
COPB1-202ENST00000439561 MON2Q7Z3U7 1717 aa10.21□□□□□ -0.77
COPB1-202ENST00000439561 FAM205CA6NFA0 338 aa10.21□□□□□ -0.77
COPB1-202ENST00000439561 MAP3K12Q12852 859 aa10.21□□□□□ -0.77
COPB1-202ENST00000439561 PALLDQ8WX93 1383 aa10.21□□□□□ -0.77
COPB1-202ENST00000439561 FAM208AQ9UK61 1670 aaKnown RBP10.21□□□□□ -0.77
COPB1-202ENST00000439561 SAMM50Q9Y512 469 aa10.21□□□□□ -0.77
COPB1-202ENST00000439561 SAR1BQ9Y6B6 198 aa10.21□□□□□ -0.77
COPB1-202ENST00000439561 NEDD4P46934 1319 aa10.21□□□□□ -0.78
COPB1-202ENST00000439561 GOLGA6BA6NDN3 693 aa10.21□□□□□ -0.78
COPB1-202ENST00000439561 MCM3P25205 808 aa10.21□□□□□ -0.78
COPB1-202ENST00000439561 MAGEA9P43362 315 aa10.21□□□□□ -0.78
COPB1-202ENST00000439561 TOM1L2Q6ZVM7 507 aa10.21□□□□□ -0.78
COPB1-202ENST00000439561 V9GY48 417 aaPredicted RBP10.21□□□□□ -0.78
COPB1-202ENST00000439561 PXDNQ92626 1479 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 LRRIQ3A6PVS8 624 aaPredicted RBP10.2□□□□□ -0.78
COPB1-202ENST00000439561 NLRP5P59047 1200 aa10.2□□□□□ -0.78
COPB1-202ENST00000439561 SPA17Q15506 151 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms